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Example 41 with OWLOntologyCreationException

use of org.semanticweb.owlapi.model.OWLOntologyCreationException in project stanbol by apache.

the class ConversionTester method testEntityOwlToJenaResource.

public void testEntityOwlToJenaResource() {
    JenaToOwlConvert j2o = new JenaToOwlConvert();
    OWLOntologyManager mgr = OWLManager.createOWLOntologyManager();
    OWLOntology ont = null;
    StmtIterator resource = null;
    try {
        ont = mgr.createOntology();
    } catch (OWLOntologyCreationException e) {
        e.printStackTrace();
        fail("Could not load ontology");
    }
    OWLDataFactory factory = mgr.getOWLDataFactory();
    OWLClass cls = factory.getOWLClass(IRI.create(CLAZZ));
    OWLDataProperty dp = factory.getOWLDataProperty(IRI.create(DP));
    OWLObjectProperty op = factory.getOWLObjectProperty(IRI.create(OP));
    OWLAnnotationProperty oa = factory.getOWLAnnotationProperty(IRI.create(label));
    OWLAnnotation oav = factory.getOWLAnnotation(oa, factory.getOWLStringLiteral(clazzlabel, "en"));
    OWLDatatype dt = factory.getOWLDatatype(IRI.create(DATATYPE));
    OWLNamedIndividual sub = factory.getOWLNamedIndividual(IRI.create(SUBJECT));
    OWLNamedIndividual obj = factory.getOWLNamedIndividual(IRI.create(OBJECT));
    OWLLiteral literal1 = factory.getOWLTypedLiteral(VALUE, dt);
    // Classe
    OWLDeclarationAxiom daxiomcls = factory.getOWLDeclarationAxiom(cls);
    // obj prop
    OWLDeclarationAxiom daxiomop = factory.getOWLDeclarationAxiom(op);
    // data prop
    OWLDeclarationAxiom daxiomdp = factory.getOWLDeclarationAxiom(dp);
    // subject
    OWLDeclarationAxiom daxiomsub = factory.getOWLDeclarationAxiom(sub);
    // object
    OWLDeclarationAxiom daxiomobj = factory.getOWLDeclarationAxiom(obj);
    // Istanza
    OWLClassAssertionAxiom axiomsub = factory.getOWLClassAssertionAxiom(cls, sub);
    // Istanza
    OWLClassAssertionAxiom axiomobj = factory.getOWLClassAssertionAxiom(cls, obj);
    // Obj
    OWLObjectPropertyAssertionAxiom axiomop = factory.getOWLObjectPropertyAssertionAxiom(op, sub, obj);
    // prop
    // tra
    // individui
    OWLDataPropertyAssertionAxiom axiomvalue = factory.getOWLDataPropertyAssertionAxiom(dp, sub, // Dataprop all'istanza;
    literal1);
    // Annotazione
    OWLAnnotationAssertionAxiom axioman = factory.getOWLAnnotationAssertionAxiom(cls.getIRI(), oav);
    mgr.addAxiom(ont, daxiomcls);
    mgr.addAxiom(ont, daxiomop);
    mgr.addAxiom(ont, daxiomdp);
    mgr.addAxiom(ont, daxiomsub);
    mgr.addAxiom(ont, daxiomobj);
    mgr.addAxiom(ont, axiomsub);
    mgr.addAxiom(ont, axiomobj);
    mgr.addAxiom(ont, axiomop);
    mgr.addAxiom(ont, axiomvalue);
    mgr.addAxiom(ont, axioman);
    Set<OWLIndividualAxiom> ind = ont.getAxioms(sub);
    try {
        resource = j2o.EntityOwlToJenaResource(daxiomsub.getEntity(), ont, RDFXML);
        if (resource == null) {
            fail("Some errors accour");
        } else {
            int cont = 0;
            while (resource.hasNext()) {
                Statement stm = resource.nextStatement();
                IRI subres = IRI.create(stm.getSubject().getURI());
                if (("<" + subres + ">").equals(daxiomsub.getEntity().toString()))
                    cont++;
            }
            assertEquals(ind.size(), (cont - 1));
        }
    } catch (Exception e) {
        e.printStackTrace();
        fail("Exception caugth");
    } finally {
        assertNotNull(resource);
    }
}
Also used : IRI(org.semanticweb.owlapi.model.IRI) OWLDeclarationAxiom(org.semanticweb.owlapi.model.OWLDeclarationAxiom) OWLDatatype(org.semanticweb.owlapi.model.OWLDatatype) OWLAnnotationProperty(org.semanticweb.owlapi.model.OWLAnnotationProperty) OWLDataPropertyAssertionAxiom(org.semanticweb.owlapi.model.OWLDataPropertyAssertionAxiom) OWLDataProperty(org.semanticweb.owlapi.model.OWLDataProperty) OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) OWLOntology(org.semanticweb.owlapi.model.OWLOntology) OWLNamedIndividual(org.semanticweb.owlapi.model.OWLNamedIndividual) OWLOntologyManager(org.semanticweb.owlapi.model.OWLOntologyManager) OWLClassAssertionAxiom(org.semanticweb.owlapi.model.OWLClassAssertionAxiom) StmtIterator(com.hp.hpl.jena.rdf.model.StmtIterator) OWLAnnotationAssertionAxiom(org.semanticweb.owlapi.model.OWLAnnotationAssertionAxiom) OWLAnnotation(org.semanticweb.owlapi.model.OWLAnnotation) Statement(com.hp.hpl.jena.rdf.model.Statement) OWLIndividualAxiom(org.semanticweb.owlapi.model.OWLIndividualAxiom) OWLObjectProperty(org.semanticweb.owlapi.model.OWLObjectProperty) OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) OWLLiteral(org.semanticweb.owlapi.model.OWLLiteral) OWLObjectPropertyAssertionAxiom(org.semanticweb.owlapi.model.OWLObjectPropertyAssertionAxiom) OWLClass(org.semanticweb.owlapi.model.OWLClass) OWLDataFactory(org.semanticweb.owlapi.model.OWLDataFactory)

Example 42 with OWLOntologyCreationException

use of org.semanticweb.owlapi.model.OWLOntologyCreationException in project stanbol by apache.

the class ConversionTester method testModelOwlToJenaConvert.

public void testModelOwlToJenaConvert() {
    JenaToOwlConvert j2o = new JenaToOwlConvert();
    OWLOntologyManager mgr = OWLManager.createOWLOntologyManager();
    OWLOntologyManager mgrf = OWLManager.createOWLOntologyManager();
    OWLDataFactory factory = mgrf.getOWLDataFactory();
    String dul = "http://www.loa-cnr.it/ontologies/DUL.owl";
    OWLOntology owl = null;
    OntModel jena = null;
    try {
        owl = mgr.loadOntologyFromOntologyDocument(IRI.create(dul));
    } catch (OWLOntologyCreationException e) {
        e.printStackTrace();
        fail("Could not load ontology");
    }
    try {
        jena = j2o.ModelOwlToJenaConvert(owl, "RDF/XML");
        if (jena == null) {
            fail("Some errors occur");
        } else {
            ExtendedIterator<OntClass> jenaclass = jena.listNamedClasses();
            int jenaclassset = jenaclass.toSet().size();
            jenaclass = jena.listNamedClasses();
            Set<OWLClass> owlclass = owl.getClassesInSignature();
            int countclass = 0;
            while (jenaclass.hasNext()) if (owlclass.contains(factory.getOWLClass(IRI.create(jenaclass.next().getURI()))))
                countclass++;
            if (countclass == jenaclassset)
                assertEquals(countclass, jenaclassset);
            else
                fail("Error in number of classes");
            ExtendedIterator<ObjectProperty> jenaprop = jena.listObjectProperties();
            int jenapropset = jenaprop.toSet().size();
            jenaprop = jena.listObjectProperties();
            Set<OWLObjectProperty> owlprop = owl.getObjectPropertiesInSignature();
            int countprop = 0;
            while (jenaprop.hasNext()) if (owlprop.contains(factory.getOWLObjectProperty(IRI.create(jenaprop.next().getURI()))))
                countprop++;
            if (countprop == jenapropset)
                assertEquals(countprop, jenapropset);
            else
                fail("Error in number of object properties");
            ExtendedIterator<DatatypeProperty> jenadata = jena.listDatatypeProperties();
            int jenadataset = jenadata.toSet().size();
            jenadata = jena.listDatatypeProperties();
            Set<OWLDataProperty> owldata = owl.getDataPropertiesInSignature();
            int countdata = 0;
            while (jenadata.hasNext()) if (owldata.contains(factory.getOWLDataProperty(IRI.create(jenadata.next().getURI()))))
                countdata++;
            if (countdata == jenadataset)
                assertEquals(countdata, jenadataset);
            else
                fail("Error in number of data properties");
        }
    } catch (Exception e) {
        e.printStackTrace();
        fail("Exception caugth");
    } finally {
        assertNotNull(jena);
    }
}
Also used : OWLObjectProperty(org.semanticweb.owlapi.model.OWLObjectProperty) ObjectProperty(com.hp.hpl.jena.ontology.ObjectProperty) OWLObjectProperty(org.semanticweb.owlapi.model.OWLObjectProperty) OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) OWLDataProperty(org.semanticweb.owlapi.model.OWLDataProperty) OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) OWLOntology(org.semanticweb.owlapi.model.OWLOntology) OntModel(com.hp.hpl.jena.ontology.OntModel) OWLClass(org.semanticweb.owlapi.model.OWLClass) OWLOntologyManager(org.semanticweb.owlapi.model.OWLOntologyManager) OWLDataFactory(org.semanticweb.owlapi.model.OWLDataFactory) OntClass(com.hp.hpl.jena.ontology.OntClass) DatatypeProperty(com.hp.hpl.jena.ontology.DatatypeProperty)

Example 43 with OWLOntologyCreationException

use of org.semanticweb.owlapi.model.OWLOntologyCreationException in project stanbol by apache.

the class JenaToOwlConvert method DataPropOwlToJena.

// //////////////////////////////////////////////////////////////////////////////
/**
     * This function converts a single OWLDataProperty of OWL to DatatypeProperty of Jena
     * 
     * @param data
     *            {An OWLDataProperty object}
     * @param format
     *            {RDF/XML or TURTLE}
     * @return {A DatatypeProperty object}
     */
public synchronized DatatypeProperty DataPropOwlToJena(OWLDataProperty data, String format) {
    while (available == false) {
        try {
            wait();
        } catch (InterruptedException e) {
            System.err.println("DataPropOwlToJena::: " + e);
        }
    }
    available = false;
    try {
        OWLOntologyManager manager = OWLManager.createOWLOntologyManager();
        OWLOntology ontology = manager.createOntology(IRI.create("http://www.semanticweb.org/owlapi/ontologies/ontology"));
        OWLDataFactory factory = manager.getOWLDataFactory();
        OWLDeclarationAxiom declarationAxiom = factory.getOWLDeclarationAxiom(data);
        manager.addAxiom(ontology, declarationAxiom);
        OntModel jenamodel = ModelOwlToJenaConvert(ontology, format);
        available = true;
        notifyAll();
        return jenamodel.getDatatypeProperty(data.getIRI().toString());
    } catch (OWLOntologyCreationException eoc) {
        System.err.print("DataPropOwlToJena::: ");
        eoc.printStackTrace();
        return null;
    }
}
Also used : OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) OWLDeclarationAxiom(org.semanticweb.owlapi.model.OWLDeclarationAxiom) OWLOntology(org.semanticweb.owlapi.model.OWLOntology) OntModel(com.hp.hpl.jena.ontology.OntModel) OWLOntologyManager(org.semanticweb.owlapi.model.OWLOntologyManager) OWLDataFactory(org.semanticweb.owlapi.model.OWLDataFactory)

Example 44 with OWLOntologyCreationException

use of org.semanticweb.owlapi.model.OWLOntologyCreationException in project stanbol by apache.

the class JenaToOwlConvert method ModelJenaToOwlConvert.

/**
     * This function converts an ontology object from Jena to OWLapi
     * 
     * @param jenamodel
     *            {An OntModel object}
     * @param format
     *            {only in "RDF/XML"}
     * @return {An OWLOntology that is an owl object}
     */
public synchronized OWLOntology ModelJenaToOwlConvert(IRI ontologyIRI, Model jenamodel, String format) {
    while (availablemain == false) {
        try {
            wait();
        } catch (InterruptedException e) {
            System.err.println("ModelJenaToOwlConvert::: " + e);
        }
    }
    availablemain = false;
    try {
        ByteArrayOutputStream out = new ByteArrayOutputStream();
        if (!format.equals("RDF/XML")) {
            System.err.println("The only format supported is RDF/XML. Please check the format!");
            availablemain = true;
            notifyAll();
            return null;
        } else {
            jenamodel.write(out, format);
            OWLOntologyManager owlmanager = OWLManager.createOWLOntologyManager();
            owlmanager.loadOntologyFromOntologyDocument(new ByteArrayInputStream(out.toByteArray()));
            OWLOntologyMerger merger = new OWLOntologyMerger(owlmanager);
            OWLOntology ontology = merger.createMergedOntology(owlmanager, ontologyIRI);
            availablemain = true;
            notifyAll();
            return ontology;
        }
    } catch (OWLOntologyCreationException eoc) {
        System.err.print("ModelJenaToOwlConvert::: ");
        eoc.printStackTrace();
        return null;
    }
}
Also used : OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) ByteArrayInputStream(java.io.ByteArrayInputStream) OWLOntology(org.semanticweb.owlapi.model.OWLOntology) OWLOntologyMerger(org.semanticweb.owlapi.util.OWLOntologyMerger) ByteArrayOutputStream(java.io.ByteArrayOutputStream) OWLOntologyManager(org.semanticweb.owlapi.model.OWLOntologyManager)

Example 45 with OWLOntologyCreationException

use of org.semanticweb.owlapi.model.OWLOntologyCreationException in project stanbol by apache.

the class JenaToOwlConvert method ClassOwlToJena.

// //////////////////////////////////////////////////////////////////////////////
/**
     * This function converts a single OWLClass of OWLAPI to an OntClass of Jena
     * 
     * @param data
     *            {An OWLClass}
     * @param format
     *            {RDF/XML or TURTLE}
     * @return {An OntClass}
     */
public synchronized OntClass ClassOwlToJena(OWLClass data, String format) {
    while (available == false) {
        try {
            wait();
        } catch (InterruptedException e) {
            System.err.println("ClassOwlToJena::: " + e);
        }
    }
    available = false;
    try {
        OWLOntologyManager manager = OWLManager.createOWLOntologyManager();
        OWLOntology ontology = manager.createOntology(IRI.create("http://www.semanticweb.org/owlapi/ontologies/ontology"));
        OWLDataFactory factory = manager.getOWLDataFactory();
        OWLDeclarationAxiom declarationAxiom = factory.getOWLDeclarationAxiom(data);
        manager.addAxiom(ontology, declarationAxiom);
        OntModel jenamodel = ModelOwlToJenaConvert(ontology, format);
        available = true;
        notifyAll();
        return jenamodel.getOntClass(data.getIRI().toString());
    } catch (OWLOntologyCreationException eoc) {
        System.err.print("ClassOwlToJena::: ");
        eoc.printStackTrace();
        return null;
    }
}
Also used : OWLOntologyCreationException(org.semanticweb.owlapi.model.OWLOntologyCreationException) OWLDeclarationAxiom(org.semanticweb.owlapi.model.OWLDeclarationAxiom) OWLOntology(org.semanticweb.owlapi.model.OWLOntology) OntModel(com.hp.hpl.jena.ontology.OntModel) OWLOntologyManager(org.semanticweb.owlapi.model.OWLOntologyManager) OWLDataFactory(org.semanticweb.owlapi.model.OWLDataFactory)

Aggregations

OWLOntologyCreationException (org.semanticweb.owlapi.model.OWLOntologyCreationException)57 OWLOntology (org.semanticweb.owlapi.model.OWLOntology)46 OWLOntologyManager (org.semanticweb.owlapi.model.OWLOntologyManager)33 OWLAxiom (org.semanticweb.owlapi.model.OWLAxiom)18 OWLDataFactory (org.semanticweb.owlapi.model.OWLDataFactory)15 HashSet (java.util.HashSet)13 OWLOntologyID (org.semanticweb.owlapi.model.OWLOntologyID)13 AddImport (org.semanticweb.owlapi.model.AddImport)12 ReasoningServiceException (org.apache.stanbol.reasoners.servicesapi.ReasoningServiceException)11 IOException (java.io.IOException)10 ArrayList (java.util.ArrayList)10 OntModel (com.hp.hpl.jena.ontology.OntModel)9 WebApplicationException (javax.ws.rs.WebApplicationException)9 ResponseBuilder (javax.ws.rs.core.Response.ResponseBuilder)9 IRI (org.semanticweb.owlapi.model.IRI)9 OWLClass (org.semanticweb.owlapi.model.OWLClass)9 Consumes (javax.ws.rs.Consumes)8 InconsistentInputException (org.apache.stanbol.reasoners.servicesapi.InconsistentInputException)8 ByteArrayInputStream (java.io.ByteArrayInputStream)7 POST (javax.ws.rs.POST)7