Examples with SearchResult uk.ac.sussex.gdsc.smlm.search.SearchResult used on opensource projects

Example 1 with SearchResult

use of uk.ac.sussex.gdsc.smlm.search.SearchResult in project GDSC-SMLM by aherbert.

the class BenchmarkFilterAnalysis method score.

@Nullable
@Override
public SearchResult<FilterScore>[] score(double[][] points) {
    gaIteration++;
    SimpleFilterScore max = filterScoreOptimum;
    final FilterScoreResult[] scoreResults = scoreFilters(setStrength(new FilterSet(searchSpaceToFilters(points))), false);
    if (scoreResults == null) {
        return null;
    }
    @SuppressWarnings("unchecked") final SearchResult<FilterScore>[] scores = new SearchResult[scoreResults.length];
    for (int index = 0; index < scoreResults.length; index++) {
        final FilterScoreResult scoreResult = scoreResults[index];
        final SimpleFilterScore result = new SimpleFilterScore(scoreResult, true, scoreResult.criteria >= minCriteria);
        if (result.compareTo(max) < 0) {
            max = result;
        }
        scores[index] = new SearchResult<>(result.result.filter.getParameters(), result);
    }
    filterScoreOptimum = max;
    // Add the best filter to the table
    // This filter may not have been part of the scored subset so use the entire results set for
    // reporting
    final DirectFilter filter = max.result.filter;
    final FractionClassificationResult r = scoreFilter(filter, defaultMinimalFilter, gaResultsList, coordinateStore);
    final StringBuilder text = createResult(filter, r);
    add(text, gaIteration);
    gaWindow.accept(text.toString());
    return scores;
}

Example 2 with SearchResult

use of uk.ac.sussex.gdsc.smlm.search.SearchResult in project GDSC-SMLM by aherbert.

the class BenchmarkFilterAnalysis method findOptimum.

@Nullable
@Override
public SearchResult<FilterScore> findOptimum(double[][] points) {
    gaIteration++;
    SimpleFilterScore max = filterScoreOptimum;
    final FilterScoreResult[] scoreResults = scoreFilters(setStrength(new FilterSet(searchSpaceToFilters(points))), false);
    if (scoreResults == null) {
        return null;
    }
    for (int index = 0; index < scoreResults.length; index++) {
        final FilterScoreResult scoreResult = scoreResults[index];
        final SimpleFilterScore result = new SimpleFilterScore(scoreResult, true, scoreResult.criteria >= minCriteria);
        if (result.compareTo(max) < 0) {
            max = result;
        }
    }
    filterScoreOptimum = max;
    // Add the best filter to the table
    // This filter may not have been part of the scored subset so use the entire results set for
    // reporting
    final DirectFilter filter = max.result.filter;
    final FractionClassificationResult r = scoreFilter(filter, defaultMinimalFilter, gaResultsList, coordinateStore);
    final StringBuilder text = createResult(filter, r);
    add(text, gaIteration);
    gaWindow.accept(text.toString());
    return new SearchResult<>(filter.getParameters(), max);
}