Examples with OtherNames org.orcid.jaxb.model.message.OtherNames used on opensource projects

Example 1 with OtherNames

use of org.orcid.jaxb.model.message.OtherNames in project ORCID-Source by ORCID.

the class OrcidJaxbCopyManagerTest method testUpdateOtherNamePreservingVisibility.

@Test
public void testUpdateOtherNamePreservingVisibility() throws Exception {
    OrcidBio existingOrcidBioProtected = protectedOrcidMessage.getOrcidProfile().getOrcidBio();
    OrcidBio updatedOrcidBioPublic = publicOrcidMessage.getOrcidProfile().getOrcidBio();
    PersonalDetails existingOrcidPersonalDetails = protectedOrcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails();
    PersonalDetails updatedOrcidPersonalDetails = publicOrcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails();
    OtherNames existingOtherNames = existingOrcidPersonalDetails.getOtherNames();
    assertEquals(Visibility.LIMITED, existingOtherNames.getVisibility());
    assertTrue(existingOtherNames.getOtherName().size() == 2);
    assertEquals("Josiah S Carberry", existingOtherNames.getOtherName().get(0).getContent());
    assertEquals("Josiah Carberry", existingOtherNames.getOtherName().get(1).getContent());
    // check content and visibility update updates the content
    OtherNames updatedOtherNames = new OtherNames();
    updatedOtherNames.getOtherName().clear();
    updatedOtherNames.addOtherName("Another 1", null);
    updatedOtherNames.addOtherName("Another 2", null);
    updatedOtherNames.setVisibility(Visibility.PRIVATE);
    updatedOrcidPersonalDetails.setOtherNames(updatedOtherNames);
    Address existingContactDetailsAddress = existingOrcidBioProtected.getContactDetails().getAddress();
    assertEquals(Iso3166Country.US, existingContactDetailsAddress.getCountry().getValue());
    existingContactDetailsAddress.getCountry().setVisibility(Visibility.LIMITED);
    Address nullVisibilityContactAddress = new Address();
    nullVisibilityContactAddress.setCountry(new Country(Iso3166Country.BM));
    nullVisibilityContactAddress.getCountry().setVisibility(null);
    updatedOrcidBioPublic.getContactDetails().setAddress(nullVisibilityContactAddress);
    orcidJaxbCopyManager.copyUpdatedBioToExistingWithVisibility(existingOrcidBioProtected, updatedOrcidBioPublic);
    existingOtherNames = existingOrcidPersonalDetails.getOtherNames();
    assertTrue(existingOtherNames.getOtherName().size() == 2);
    assertEquals("Another 1", existingOtherNames.getOtherName().get(0).getContent());
    assertEquals("Another 2", existingOtherNames.getOtherName().get(1).getContent());
    assertEquals(Visibility.PRIVATE, existingOtherNames.getVisibility());
    // check content and visibility update of null
    updatedOtherNames = new OtherNames();
    updatedOtherNames.getOtherName().clear();
    updatedOtherNames.addOtherName("Yet Another 1", null);
    updatedOtherNames.addOtherName("Yet Another 2", null);
    updatedOtherNames.setVisibility(null);
    updatedOrcidPersonalDetails.setOtherNames(updatedOtherNames);
    orcidJaxbCopyManager.copyUpdatedBioToExistingWithVisibility(existingOrcidBioProtected, updatedOrcidBioPublic);
    assertEquals(2, existingOrcidBioProtected.getPersonalDetails().getOtherNames().getOtherName().size());
    assertEquals("Yet Another 1", existingOrcidBioProtected.getPersonalDetails().getOtherNames().getOtherName().get(0).getContent());
    assertEquals("Yet Another 2", existingOrcidBioProtected.getPersonalDetails().getOtherNames().getOtherName().get(1).getContent());
    assertEquals(Visibility.PRIVATE, existingOrcidBioProtected.getPersonalDetails().getOtherNames().getVisibility());
    existingContactDetailsAddress = existingOrcidBioProtected.getContactDetails().getAddress();
    assertEquals(Visibility.LIMITED, existingContactDetailsAddress.getCountry().getVisibility());
    assertEquals(Iso3166Country.BM, existingContactDetailsAddress.getCountry().getValue());
}

Example 2 with OtherNames

use of org.orcid.jaxb.model.message.OtherNames in project ORCID-Source by ORCID.

the class OrcidApiAuthorizationSecurityAspect method visibilityResponseFilter.

@AfterReturning(pointcut = "@annotation(accessControl)", returning = "response")
public void visibilityResponseFilter(Response response, AccessControl accessControl) {
    if (accessControl.requestComesFromInternalApi()) {
        return;
    }
    Object entity = response.getEntity();
    if (entity != null && OrcidMessage.class.isAssignableFrom(entity.getClass())) {
        OrcidMessage orcidMessage = (OrcidMessage) entity;
        //If it is search results, don't filter them, just return them
        if (orcidMessage.getOrcidSearchResults() != null) {
            return;
        }
        // get the client id
        Object authentication = getAuthentication();
        Set<Visibility> visibilities = new HashSet<Visibility>();
        if (allowAnonymousAccess((Authentication) authentication, accessControl)) {
            visibilities.add(Visibility.PUBLIC);
        } else {
            visibilities = permissionChecker.obtainVisibilitiesForAuthentication(getAuthentication(), accessControl.requiredScope(), orcidMessage);
        }
        //If the message contains a bio, and the given name is filtered, restore it as an empty space
        boolean setEmptyGivenNameIfFiltered = false;
        if (orcidMessage.getOrcidProfile() != null) {
            if (orcidMessage.getOrcidProfile() != null && orcidMessage.getOrcidProfile().getOrcidBio() != null) {
                setEmptyGivenNameIfFiltered = true;
            }
        }
        ScopePathType requiredScope = accessControl.requiredScope();
        // If the required scope is */read-limited or */update
        if (isUpdateOrReadScope(requiredScope)) {
            // if it should be able to
            if (OrcidOAuth2Authentication.class.isAssignableFrom(authentication.getClass())) {
                OrcidOAuth2Authentication orcidAuth = (OrcidOAuth2Authentication) getAuthentication();
                OAuth2Request authorization = orcidAuth.getOAuth2Request();
                String clientId = authorization.getClientId();
                // #1: Get the user orcid
                String userOrcid = getUserOrcidFromOrcidMessage(orcidMessage);
                // #2: Evaluate the scope to know which field to filter
                boolean allowWorks = false;
                boolean allowFunding = false;
                boolean allowAffiliations = false;
                // Get the update equivalent scope, if it is reading, but,
                // doesnt have the read permissions, check if it have the
                // update permissions
                ScopePathType equivalentUpdateScope = getEquivalentUpdateScope(requiredScope);
                if (requiredScope.equals(ScopePathType.READ_LIMITED)) {
                    if (hasScopeEnabled(clientId, userOrcid, ScopePathType.ORCID_WORKS_READ_LIMITED.getContent(), ScopePathType.ORCID_WORKS_UPDATE.getContent()))
                        allowWorks = true;
                    if (hasScopeEnabled(clientId, userOrcid, ScopePathType.FUNDING_READ_LIMITED.getContent(), ScopePathType.FUNDING_UPDATE.getContent()))
                        allowFunding = true;
                    if (hasScopeEnabled(clientId, userOrcid, ScopePathType.AFFILIATIONS_READ_LIMITED.getContent(), ScopePathType.AFFILIATIONS_UPDATE.getContent()))
                        allowAffiliations = true;
                } else if (requiredScope.equals(ScopePathType.ORCID_WORKS_UPDATE) || requiredScope.equals(ScopePathType.ORCID_WORKS_READ_LIMITED)) {
                    // works
                    if (hasScopeEnabled(clientId, userOrcid, requiredScope.getContent(), equivalentUpdateScope == null ? null : equivalentUpdateScope.getContent()))
                        // If so, allow him to see private works
                        allowWorks = true;
                } else if (requiredScope.equals(ScopePathType.FUNDING_UPDATE) || requiredScope.equals(ScopePathType.FUNDING_READ_LIMITED)) {
                    // funding
                    if (hasScopeEnabled(clientId, userOrcid, requiredScope.getContent(), equivalentUpdateScope == null ? null : equivalentUpdateScope.getContent()))
                        // If so, allow him to see private funding
                        allowFunding = true;
                } else if (requiredScope.equals(ScopePathType.AFFILIATIONS_UPDATE) || requiredScope.equals(ScopePathType.AFFILIATIONS_READ_LIMITED)) {
                    // affiliations
                    if (hasScopeEnabled(clientId, userOrcid, requiredScope.getContent(), equivalentUpdateScope == null ? null : equivalentUpdateScope.getContent()))
                        // If so, allow him to see private affiliations
                        allowAffiliations = true;
                }
                visibilityFilter.filter(orcidMessage, clientId, allowWorks, allowFunding, allowAffiliations, visibilities.toArray(new Visibility[visibilities.size()]));
            } else {
                visibilityFilter.filter(orcidMessage, null, false, false, false, visibilities.toArray(new Visibility[visibilities.size()]));
            }
        } else {
            visibilityFilter.filter(orcidMessage, null, false, false, false, visibilities.toArray(new Visibility[visibilities.size()]));
        }
        //If the given name was set at the beginning and now is filtered, it means we should restore it as an empty field
        if (setEmptyGivenNameIfFiltered) {
            if (orcidMessage.getOrcidProfile() != null) {
                if (orcidMessage.getOrcidProfile().getOrcidBio() == null) {
                    orcidMessage.getOrcidProfile().setOrcidBio(new OrcidBio());
                }
                if (orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails() == null) {
                    orcidMessage.getOrcidProfile().getOrcidBio().setPersonalDetails(new PersonalDetails());
                }
            }
        }
        //Filter given or family names visibility 
        if (orcidMessage.getOrcidProfile() != null) {
            if (orcidMessage.getOrcidProfile().getOrcidBio() != null) {
                if (orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails() != null) {
                    if (orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails().getGivenNames() != null) {
                        orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails().getGivenNames().setVisibility(null);
                    } else {
                        //Null given names could break client integrations, so, lets return an empty string
                        GivenNames empty = new GivenNames();
                        empty.setContent(StringUtils.EMPTY);
                        orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails().setGivenNames(empty);
                    }
                    if (orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails().getFamilyName() != null) {
                        orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails().getFamilyName().setVisibility(null);
                    }
                }
            }
        }
        //replace section visibilities now we may have filtered items
        if (orcidMessage.getOrcidProfile() != null) {
            if (orcidMessage.getOrcidProfile().getOrcidBio() != null) {
                if (orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails() != null) {
                    OtherNames n = orcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails().getOtherNames();
                    if (n != null) {
                        n.setVisibility(getMostFromCollection(n.getOtherName()));
                    }
                }
                ExternalIdentifiers ids = orcidMessage.getOrcidProfile().getOrcidBio().getExternalIdentifiers();
                if (ids != null) {
                    ids.setVisibility(getMostFromCollection(ids.getExternalIdentifier()));
                }
                Keywords kws = orcidMessage.getOrcidProfile().getOrcidBio().getKeywords();
                if (kws != null) {
                    kws.setVisibility(getMostFromCollection(kws.getKeyword()));
                }
                ResearcherUrls urls = orcidMessage.getOrcidProfile().getOrcidBio().getResearcherUrls();
                if (urls != null) {
                    urls.setVisibility(getMostFromCollection(urls.getResearcherUrl()));
                }
            }
        }
    }
}

Example 3 with OtherNames

use of org.orcid.jaxb.model.message.OtherNames in project ORCID-Source by ORCID.

the class JpaJaxbEntityAdapterToOrcidProfileTest method checkPersonalDetails.

private void checkPersonalDetails(PersonalDetails personalDetails) {
    assertNotNull(personalDetails);
    FamilyName familyName = personalDetails.getFamilyName();
    assertNotNull(familyName);
    assertEquals("Sellers", familyName.getContent());
    GivenNames givenNames = personalDetails.getGivenNames();
    assertNotNull(givenNames);
    assertEquals("Peter", givenNames.getContent());
    CreditName creditName = personalDetails.getCreditName();
    assertNotNull(creditName);
    assertEquals("P. Sellers III", creditName.getContent());
    assertEquals("LIMITED", creditName.getVisibility().name());
    OtherNames otherNames = personalDetails.getOtherNames();
    assertNotNull(otherNames);
    List<String> otherNameList = otherNames.getOtherNamesAsStrings();
    Collections.sort(otherNameList);
    assertEquals(2, otherNameList.size());
    assertEquals("Flibberdy Flabinah", otherNameList.get(0));
    assertEquals("Slibberdy Slabinah", otherNameList.get(1));
}

Example 4 with OtherNames

use of org.orcid.jaxb.model.message.OtherNames in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method testDefaultVisibilityForItemsAppliedOnUpdate.

@Test
@Transactional
@Rollback(true)
public void testDefaultVisibilityForItemsAppliedOnUpdate() {
    OrcidProfile profile = createBasicProfile();
    OrcidHistory orcidHistory = new OrcidHistory();
    orcidHistory.setClaimed(new Claimed(true));
    orcidHistory.setCreationMethod(CreationMethod.DIRECT);
    orcidHistory.setSubmissionDate(new SubmissionDate(DateUtils.convertToXMLGregorianCalendar(new Date())));
    profile.setOrcidHistory(orcidHistory);
    Keyword k = new Keyword("word", null);
    Keywords kk = new Keywords();
    kk.getKeyword().add(k);
    kk.setVisibility(Visibility.LIMITED);
    ResearcherUrl r = new ResearcherUrl(new Url("http://whatever.com"), null);
    ResearcherUrls rr = new ResearcherUrls();
    rr.getResearcherUrl().add(r);
    rr.setVisibility(Visibility.LIMITED);
    ExternalIdentifier i = new ExternalIdentifier(null);
    i.setExternalIdReference(new ExternalIdReference("ref"));
    i.setExternalIdCommonName(new ExternalIdCommonName("cn"));
    ExternalIdentifiers ii = new ExternalIdentifiers();
    ii.getExternalIdentifier().add(i);
    ii.setVisibility(Visibility.LIMITED);
    OtherNames oo = new OtherNames();
    oo.addOtherName("other", null);
    oo.setVisibility(Visibility.LIMITED);
    profile.getOrcidBio().setKeywords(kk);
    profile.getOrcidBio().setResearcherUrls(rr);
    profile.getOrcidBio().setExternalIdentifiers(ii);
    profile.getOrcidBio().getPersonalDetails().setOtherNames(oo);
    //Create the profile
    profile = orcidProfileManager.createOrcidProfile(profile, true, false);
    Preferences preferences = new Preferences();
    preferences.setSendChangeNotifications(new SendChangeNotifications(true));
    preferences.setSendOrcidNews(new SendOrcidNews(true));
    //Default visibility for user will be LIMITED
    preferences.setActivitiesVisibilityDefault(new ActivitiesVisibilityDefault(Visibility.LIMITED));
    preferences.setNotificationsEnabled(DefaultPreferences.NOTIFICATIONS_ENABLED);
    preferences.setSendEmailFrequencyDays(DefaultPreferences.SEND_EMAIL_FREQUENCY_DAYS);
    preferences.setSendMemberUpdateRequests(DefaultPreferences.SEND_MEMBER_UPDATE_REQUESTS);
    OrcidInternal internal = new OrcidInternal();
    internal.setPreferences(preferences);
    profile.setOrcidInternal(internal);
    profile.getOrcidInternal().getPreferences().setActivitiesVisibilityDefault(new ActivitiesVisibilityDefault(Visibility.LIMITED));
    //Claim the profile
    profile = orcidProfileManager.updateOrcidProfile(profile);
    //now attempt to alter privacy.  It should fail as record has been claimed.
    profile.getOrcidBio().getKeywords().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getResearcherUrls().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getExternalIdentifiers().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getPersonalDetails().getOtherNames().setVisibility(Visibility.PUBLIC);
    profile = orcidProfileManager.updateOrcidProfile(profile);
    assertEquals("word", profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getContent());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getVisibility());
    assertEquals(new Url("http://whatever.com"), profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getUrl());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getVisibility());
    assertEquals("cn", profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getExternalIdCommonName().getContent());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getVisibility());
    assertEquals("other", profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getContent());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getVisibility());
}

Example 5 with OtherNames

use of org.orcid.jaxb.model.message.OtherNames in project ORCID-Source by ORCID.

the class OrcidSearchManagerImplTest method getOrcidProfileAllIndexFieldsPopulated.

private OrcidProfile getOrcidProfileAllIndexFieldsPopulated() {
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidProfile.setOrcidIdentifier("5678");
    OrcidBio orcidBio = new OrcidBio();
    PersonalDetails personalDetails = new PersonalDetails();
    personalDetails.setFamilyName(new FamilyName("Logan"));
    personalDetails.setGivenNames(new GivenNames("Donald Edward"));
    personalDetails.setCreditName(new CreditName("Stanley Higgins"));
    OtherNames otherNames = new OtherNames();
    otherNames.getOtherName().add(new OtherName("Edward Bass", null));
    otherNames.getOtherName().add(new OtherName("Gareth Dove", null));
    personalDetails.setOtherNames(otherNames);
    orcidBio.setPersonalDetails(personalDetails);
    orcidProfile.setOrcidBio(orcidBio);
    OrcidActivities orcidActivities = new OrcidActivities();
    orcidProfile.setOrcidActivities(orcidActivities);
    Affiliations affiliations = new Affiliations();
    orcidActivities.setAffiliations(affiliations);
    OrcidWorks orcidWorks = new OrcidWorks();
    orcidProfile.setOrcidWorks(orcidWorks);
    OrcidWork orcidWork1 = new OrcidWork();
    OrcidWork orcidWork2 = new OrcidWork();
    assignWorkIdentifers(orcidWork1, orcidWork2);
    orcidWorks.getOrcidWork().add(orcidWork1);
    orcidWorks.getOrcidWork().add(orcidWork2);
    orcidProfile.setOrcidWorks(orcidWorks);
    FundingList orcidFundings = new FundingList();
    orcidProfile.setFundings(orcidFundings);
    Funding funding1 = new Funding();
    funding1.setVisibility(Visibility.PUBLIC);
    FundingTitle title = new FundingTitle();
    title.setTitle(new Title("grant1"));
    funding1.setTitle(title);
    funding1.setDescription("Grant 1 - a short description");
    funding1.setPutCode("grant 1 - put-code");
    Funding funding2 = new Funding();
    funding2.setVisibility(Visibility.PUBLIC);
    FundingTitle title2 = new FundingTitle();
    title2.setTitle(new Title("grant2"));
    funding2.setTitle(title2);
    funding2.setDescription("Grant 2 - a short description");
    funding2.setPutCode("grant 2 - put-code");
    orcidFundings.getFundings().add(funding1);
    orcidFundings.getFundings().add(funding2);
    return orcidProfile;
}