Examples with Message com.google.api.services.healthcare.v1.model.Message used on opensource projects

Example 71 with Message

use of com.google.api.services.healthcare.v1.model.Message in project streamsx.health by IBMStreams.

the class OruR01Ingest method run.

@Override
public void run() {
    Topology topology = new Topology("OruR01Ingest");
    ObxToSplMapper mapper = new ObxToSplMapper();
    addDependencies(topology);
    TStream<Message> messages = topology.endlessSource(new HapiMessageSupplier(getPort()));
    // transform message to Observation object
    TStream<Observation> observationStream = messages.multiTransform(message -> {
        return mapper.messageToModel(message);
    });
    StreamSchema schema = Type.Factory.getStreamSchema(Observation.OBSERVATION_SCHEMA_SPL);
    @SuppressWarnings("serial") SPLStream splObservations = SPLStreams.convertStream(observationStream, new BiFunction<Observation, OutputTuple, OutputTuple>() {

        @Override
        public OutputTuple apply(Observation observation, OutputTuple outTuple) {
            return mapper.modelToSpl(observation, outTuple);
        }
    }, schema);
    splObservations.print();
    splObservations.publish(getTopic());
    try {
        StreamsContextFactory.getStreamsContext(StreamsContext.Type.DISTRIBUTED).submit(topology);
    } catch (Exception e) {
        TRACE.error("Unable to submit topology", e);
    }
}

Example 72 with Message

use of com.google.api.services.healthcare.v1.model.Message in project tdi-studio-se by Talend.

the class HL7MessageTreeContentProvider method getChildren.

public Object[] getChildren(Object parentElement) {
    List values = new ArrayList();
    if (parentElement instanceof Message) {
        Message messParent = (Message) parentElement;
        String[] childNames = messParent.getNames();
        if (!values.isEmpty()) {
            values.clear();
        }
        for (int i = 0; i < childNames.length; i++) {
            try {
                Structure[] childReps = messParent.getAll(childNames[i]);
                for (int j = 0; j < childReps.length; j++) {
                    if (childReps[j] instanceof Message) {
                        values.add(childReps[j]);
                    }
                    if (childReps[j] instanceof Group) {
                        values.add((Group) childReps[j]);
                        allSegmentFromGroup.clear();
                        getAllSegmentsFromGroup((Group) childReps[j]);
                    }
                    if (childReps[j] instanceof Segment) {
                        SegmentModel sModel = new SegmentModel((Segment) childReps[j], messParent, i, j);
                        if (sModel.getTypes() != null && sModel.getTypes().length > 0) {
                            values.add(sModel);
                            if (!allSegmentsForMessage.contains(sModel)) {
                                allSegmentsForMessage.add(sModel);
                            }
                        }
                    }
                }
            // values.addAll(Arrays.asList(childReps));
            } catch (HL7Exception e) {
                e.printStackTrace();
            }
        }
        return values.toArray();
    }
    if (parentElement instanceof Segment) {
        values.clear();
        Segment segment = (Segment) parentElement;
        SegmentModel sm = new SegmentModel(segment, segment, 0, 0);
        return sm.getTypes();
    }
    if (parentElement instanceof SegmentModel) {
        SegmentModel sm = (SegmentModel) parentElement;
        return sm.getTypes();
    }
    if (parentElement instanceof TypeModel) {
        TypeModel tm = (TypeModel) parentElement;
        return tm.getPrimitives();
    }
    if (parentElement instanceof Group) {
        values.clear();
        Group group = (Group) parentElement;
        String[] childNames = group.getNames();
        for (int i = 0; i < childNames.length; i++) {
            try {
                Structure[] childReps = group.getAll(childNames[i]);
                for (int j = 0; j < childReps.length; j++) {
                    if (childReps[j] instanceof Segment) {
                        SegmentModel sm = new SegmentModel((Segment) childReps[j], group, i, j);
                        if (sm.getTypes() != null && sm.getTypes().length > 0) {
                            values.add(sm);
                        }
                    } else {
                        values.add(childReps[j]);
                    }
                }
            // values.addAll(Arrays.asList(childReps));
            } catch (HL7Exception e) {
                e.printStackTrace();
            }
        }
        return values.toArray();
    }
    return new Object[0];
}

Example 73 with Message

use of com.google.api.services.healthcare.v1.model.Message in project tdi-studio-se by Talend.

the class HL7Parse method doParse.

/**
     * DOC gcui Comment method "doParse".
     * 
     * @param filePath
     * @return
     */
public List<Message> doParse(String filePath, String startChar, String endChar) {
    List<Message> messageList = new ArrayList<Message>();
    String filePathNoQuotes = TalendTextUtils.removeQuotes(filePath);
    File file = Path.fromOSString(filePathNoQuotes).toFile();
    if (file.exists()) {
        ByteArray array = PropertiesFactory.eINSTANCE.createByteArray();
        try {
            array.setInnerContentFromFile(file);
            TalendHL7Reader talendHL7Reader = new TalendHL7Reader(new java.io.FileInputStream(file), "ISO-8859-15");
            if (startChar != null) {
                talendHL7Reader.setStartMsgChar(stringParse2Char(startChar));
            }
            if (endChar != null) {
                talendHL7Reader.setEndMsgChar(stringParse2Char(endChar));
            }
            String HL7InputTem = null;
            String messageText = "";
            while ((HL7InputTem = talendHL7Reader.getMessage()) != null) {
                Message message = getHL7MessageInput(HL7InputTem);
                messageList.add(message);
                messageText = messageText + HL7InputTem + "\r";
            }
            if (messageText == null || "".equals(messageText)) {
                messageText = new String(array.getInnerContent());
            }
            talendHL7Reader.close();
        } catch (IOException ex) {
            ExceptionHandler.process(ex);
        }
    } else {
        MessageBox message = new MessageBox(new Shell(), SWT.APPLICATION_MODAL | SWT.OK);
        //$NON-NLS-1$
        message.setText("The file is not exist");
        //$NON-NLS-1$
        message.setMessage("Please check the file path and select the file again");
        if (message.open() == SWT.OK) {
            message.getParent().getShell().close();
        }
    }
    return messageList;
}

Example 74 with Message

use of com.google.api.services.healthcare.v1.model.Message in project tdi-studio-se by Talend.

the class HL7Parse method doParse.

/**
     * DOC gcui Comment method "doParse".
     * 
     * @param msgList
     * @return
     */
public List<Message> doParse(List<String> msgList) {
    List<Message> messageList = new ArrayList<Message>();
    for (int i = 0; i < msgList.size(); i++) {
        Message message = getHL7MessageInput(msgList.get(i));
        messageList.add(message);
    }
    return messageList;
}

Example 75 with Message

use of com.google.api.services.healthcare.v1.model.Message in project tdi-studio-se by Talend.

the class HL7UI method initMessageTree.

public void initMessageTree() {
    HL7Parse hl7Parse = new HL7Parse();
    List<Message> messageList = new ArrayList<Message>();
    if (initMsgContentList != null && initMsgContentList.size() > 0) {
        messageList = hl7Parse.doParse(initMsgContentList);
        if (messageList != null && messageList.size() > 0) {
            messageViewer.setInput(messageList.toArray());
        } else {
            messageViewer.setInput(null);
        }
    } else {
        filePath = externalNode.getElementParameter(EParameterName.FILENAME.getName()).getValue().toString();
        String filePathNoQuotes = TalendTextUtils.removeQuotes(filePath);
        File file = Path.fromOSString(filePathNoQuotes).toFile();
        if (file.exists()) {
            messageList = hl7Parse.doParse(filePath, startChar, endChar);
            if (messageList != null && messageList.size() > 0) {
                messageViewer.setInput(messageList.toArray());
            } else {
                messageViewer.setInput(null);
            }
        }
    }
}