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Example 56 with Message

use of com.google.api.services.healthcare.v1.model.Message in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldCreateObsValueCodedName.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldCreateObsValueCodedName() throws Exception {
    ObsService obsService = Context.getObsService();
    // the patient that is the focus of
    Patient patient = new Patient(3);
    // this hl7 message
    // the question concept for
    Concept concept = new Concept(21);
    // "Food assistance for entire family?"
    // sanity check to make sure this obs doesn't exist already
    Assert.assertEquals(0, obsService.getObservationsByPersonAndConcept(patient, concept).size());
    String hl7String = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20090728170332||ORU^R01|gu99yBh4loLX2mh9cHaV|P|2.5|1||||||||4^AMRS.ELD.FORMID\r" + "PID|||3^^^^||Beren^John^Bondo||\r" + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20090714|||||||V\r" + "ORC|RE||||||||20090728165937|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|5497^CD4 COUNT^99DCT||123|||||||||20090714\r" + "OBR|3|||23^FOOD CONSTRUCT^99DCT\r" + "OBX|1|CWE|21^FOOD ASSISTANCE FOR ENTIRE FAMILY^99DCT||22^UNKNOWN^99DCT^2471^UNKNOWN^99NAM|||||||||20090714";
    Message hl7message = parser.parse(hl7String);
    router.processMessage(hl7message);
    List<Obs> obss = obsService.getObservationsByPersonAndConcept(patient, concept);
    ConceptName name = obss.get(0).getValueCodedName();
    Assert.assertNotNull(name);
    Assert.assertEquals("The valueCodedName should be 2471", 2471, name.getId().intValue());
}
Also used : Concept(org.openmrs.Concept) Obs(org.openmrs.Obs) Message(ca.uhn.hl7v2.model.Message) Patient(org.openmrs.Patient) ConceptName(org.openmrs.ConceptName) ObsService(org.openmrs.api.ObsService) Test(org.junit.Test) BaseContextSensitiveTest(org.openmrs.test.BaseContextSensitiveTest)

Example 57 with Message

use of com.google.api.services.healthcare.v1.model.Message in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldSetValue_CodedMatchingABooleanConceptForObsIfTheAnswerIs0Or1AndQuestionDatatypeIsCoded.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_CodedMatchingABooleanConceptForObsIfTheAnswerIs0Or1AndQuestionDatatypeIsCoded() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|21^CIVIL STATUS^99DCT||1|||||||||20080206";
    // the expected question for the obs in the hl7 message has to be coded
    Assert.assertEquals("Coded", Context.getConceptService().getConcept(21).getDatatype().getName());
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(21));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    // hacky way to get the newly added obs and make tests on it
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(21));
    Obs newObservation = null;
    for (Obs newObs : newList) {
        if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
            newObservation = newObs;
        }
    }
    Assert.assertEquals(Context.getConceptService().getTrueConcept(), newObservation.getValueCoded());
}
Also used : Concept(org.openmrs.Concept) Obs(org.openmrs.Obs) Message(ca.uhn.hl7v2.model.Message) ObsService(org.openmrs.api.ObsService) Person(org.openmrs.Person) Test(org.junit.Test) BaseContextSensitiveTest(org.openmrs.test.BaseContextSensitiveTest)

Example 58 with Message

use of com.google.api.services.healthcare.v1.model.Message in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processNK1_shouldCreateAPersonIfTheRelativeIsNotFound.

/**
 * @see ORUR01Handler#processNK1(Patient,NK1)
 */
@Test
public void processNK1_shouldCreateAPersonIfTheRelativeIsNotFound() throws Exception {
    // process a message with an invalid relative identifier
    PersonService personService = Context.getPersonService();
    // the patient that is the focus of
    Patient patient = new Patient(3);
    // this hl7 message
    String hl7String = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20090728170332||ORU^R01|gu99yBh4loLX2mh9cHaV|P|2.5|1||||||||4^AMRS.ELD.FORMID\r" + "PID|||3^^^^||Beren^John^Bondo||\r" + "NK1|1|Jones^Jane^Lee^^RN|3A^Parent^99REL||||||||||||F|19751016|||||||||||||||||2178037d-f86b-4f12-8d8b-be3ebc220029^^^UUID^v4\r" + "PV1||O|1^Unknown||||1^Super User (admin)|||||||||||||||||||||||||||||||||||||20090714|||||||V\r" + "ORC|RE||||||||20090728165937|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|2|NM|5497^CD4 COUNT^99DCT||123|||||||||20090714\r" + "OBR|3|||23^FOOD CONSTRUCT^99DCT\r" + "OBX|1|CWE|21^FOOD ASSISTANCE FOR ENTIRE FAMILY^99DCT||22^UNKNOWN^99DCT^2471^UNKNOWN^99NAM|||||||||20090714";
    ORUR01Handler oruHandler = new ORUR01Handler();
    Message hl7message = parser.parse(hl7String);
    ORU_R01 oru = (ORU_R01) hl7message;
    List<NK1> nk1List = oruHandler.getNK1List(oru);
    for (NK1 nk1 : nk1List) oruHandler.processNK1(patient, nk1);
    // find the relative in the database
    Person relative = personService.getPersonByUuid("2178037d-f86b-4f12-8d8b-be3ebc220029");
    Assert.assertNotNull("a new person was not created", relative);
    // see if the relative made it into the relationship properly
    List<Relationship> rels = personService.getRelationships(relative, patient, new RelationshipType(3));
    Assert.assertTrue("new relationship was not created", !rels.isEmpty() && rels.size() == 1);
}
Also used : Message(ca.uhn.hl7v2.model.Message) ORU_R01(ca.uhn.hl7v2.model.v25.message.ORU_R01) NK1(ca.uhn.hl7v2.model.v25.segment.NK1) PersonService(org.openmrs.api.PersonService) Relationship(org.openmrs.Relationship) RelationshipType(org.openmrs.RelationshipType) Patient(org.openmrs.Patient) Person(org.openmrs.Person) Test(org.junit.Test) BaseContextSensitiveTest(org.openmrs.test.BaseContextSensitiveTest)

Example 59 with Message

use of com.google.api.services.healthcare.v1.model.Message in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldFailIfTheProviderNameTypeCodeIsNotSpecifiedAndIsNotAPersonId.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test(expected = ApplicationException.class)
public void processMessage_shouldFailIfTheProviderNameTypeCodeIsNotSpecifiedAndIsNotAPersonId() throws Exception {
    int patientId = 2;
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||" + patientId + "^^^^||Hornblower^Horatio^Test||\r" + "PV1||O|1^Unknown Location||||Test^Super User (1-8)^^^^^^^&" + HL7Constants.PROVIDER_ASSIGNING_AUTH_IDENTIFIER + "&^|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT";
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
}
Also used : Message(ca.uhn.hl7v2.model.Message) Test(org.junit.Test) BaseContextSensitiveTest(org.openmrs.test.BaseContextSensitiveTest)

Example 60 with Message

use of com.google.api.services.healthcare.v1.model.Message in project openmrs-core by openmrs.

the class ORUR01HandlerTest method processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumeric.

/**
 * @see ORUR01Handler#processMessage(Message)
 */
@Test
public void processMessage_shouldSetValue_NumericForObsIfQuestionDatatypeIsNumeric() throws Exception {
    ObsService os = Context.getObsService();
    String hl7string = "MSH|^~\\&|FORMENTRY|AMRS.ELD|HL7LISTENER|AMRS.ELD|20080226102656||ORU^R01|JqnfhKKtouEz8kzTk6Zo|P|2.5|1||||||||16^AMRS.ELD.FORMID\r" + "PID|||7^^^^||Collet^Test^Chebaskwony||\r" + "PV1||O|1^Unknown Location||||1^Super User (1-8)|||||||||||||||||||||||||||||||||||||20080212|||||||V\r" + "ORC|RE||||||||20080226102537|1^Super User\r" + "OBR|1|||1238^MEDICAL RECORD OBSERVATIONS^99DCT\r" + "OBX|1|NM|5497^CD4, BY FACS^99DCT||450|||||||||20080206";
    // the expected question for the obs in the hl7 message has to be
    // numeric
    Assert.assertEquals("Numeric", Context.getConceptService().getConcept(5497).getDatatype().getName());
    List<Obs> oldList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Message hl7message = parser.parse(hl7string);
    router.processMessage(hl7message);
    List<Obs> newList = os.getObservationsByPersonAndConcept(new Person(7), new Concept(5497));
    Obs newObservation = null;
    for (Obs newObs : newList) {
        if (!oldList.contains(newObs) && !newObs.isObsGrouping()) {
            newObservation = newObs;
        }
    }
    Assert.assertEquals(450, newObservation.getValueNumeric().intValue());
}
Also used : Concept(org.openmrs.Concept) Obs(org.openmrs.Obs) Message(ca.uhn.hl7v2.model.Message) ObsService(org.openmrs.api.ObsService) Person(org.openmrs.Person) Test(org.junit.Test) BaseContextSensitiveTest(org.openmrs.test.BaseContextSensitiveTest)

Aggregations

Message (ca.uhn.hl7v2.model.Message)114 Test (org.junit.Test)81 BaseContextSensitiveTest (org.openmrs.test.BaseContextSensitiveTest)60 ORU_R01 (ca.uhn.hl7v2.model.v25.message.ORU_R01)30 NK1 (ca.uhn.hl7v2.model.v25.segment.NK1)21 Patient (org.openmrs.Patient)21 MockEndpoint (org.apache.camel.component.mock.MockEndpoint)17 ORUR01Handler (org.openmrs.hl7.handler.ORUR01Handler)15 Person (org.openmrs.Person)14 ArrayList (java.util.ArrayList)13 HL7Exception (ca.uhn.hl7v2.HL7Exception)12 Concept (org.openmrs.Concept)12 Obs (org.openmrs.Obs)12 ObsService (org.openmrs.api.ObsService)11 QRD (ca.uhn.hl7v2.model.v24.segment.QRD)9 IOException (java.io.IOException)8 Encounter (org.openmrs.Encounter)8 RouteBuilder (org.apache.camel.builder.RouteBuilder)7 Structure (ca.uhn.hl7v2.model.Structure)5 CX (ca.uhn.hl7v2.model.v25.datatype.CX)5