Examples with Patient com.ibm.streamsx.health.ingest.types.model.Patient used on opensource projects

Example 1 with Patient

use of com.ibm.streamsx.health.ingest.types.model.Patient in project streamsx.health by IBMStreams.

the class AdtToModelMapper method messageToModel.

@SuppressWarnings("unchecked")
public <T> Iterable<T> messageToModel(Message message) {
    ArrayList<ADTEvent> adtEvents = new ArrayList<ADTEvent>();
    if (message instanceof ADT_AXX) {
        ADT_AXX superMsg = (ADT_AXX) message;
        MessageInfo msg = new MessageInfo();
        Patient patient = new Patient();
        try {
            MSH header = superMsg.getMSH();
            msg.setSendingApp(header.getSendingApplication().encode());
            msg.setSendingFacility(header.getSendingFacility().encode());
            msg.setReceivingApp(header.getReceivingApplication().encode());
            msg.setReceivingFacility(header.getReceivingFacility().encode());
            msg.setMessageTs(header.getDateTimeOfMessage().encode());
            msg.setMessageType(header.getMessageType().encode());
            PID pid = superMsg.getPID();
            patient.setId(pid.getPatientID().encode());
            XPN[] patientNames = pid.getPatientName();
            for (XPN name : patientNames) {
                if (patient.getName().equals(IInjestServicesConstants.EMPTYSTR)) {
                    patient.setName(getPatientFullName(name));
                } else {
                    patient.addAlternateName(getPatientFullName(name));
                }
            }
            patient.setGender(pid.getAdministrativeSex().encode());
            patient.setDateOfBirth(pid.getDateTimeOfBirth().encode());
            CX[] ids = pid.getAlternatePatientIDPID();
            if (ids.length > 0) {
                for (CX cx : ids) {
                    patient.addAlternativeId(cx.encode());
                }
            }
            EventDetails evt = new EventDetails();
            EVN evn = superMsg.getEVN();
            evt.setEventType(evn.getEventTypeCode().encode());
            evt.setEventTs(evn.getEvn6_EventOccurred().encode());
            evt.setRecordTs(evn.getEvn2_RecordedDateTime().encode());
            PV1 pv1 = superMsg.getPV1();
            PatientVisit patientVisit = new PatientVisit();
            patientVisit.setPatientClass(pv1.getPatientClass().encode());
            patientVisit.setLocation(pv1.getAssignedPatientLocation().encode());
            patientVisit.setPriorLocation(pv1.getPriorPatientLocation().encode());
            patientVisit.setVisitNumber(pv1.getVisitNumber().encode());
            patient.setStatus(pv1.getBedStatus().encode());
            XCN[] doctors = pv1.getAttendingDoctor();
            for (XCN xcn : doctors) {
                String id = xcn.getIDNumber().encode();
                String name = xcn.getFamilyName().encode() + " " + xcn.getGivenName().encode();
                Clinician clinician = new Clinician();
                clinician.setId(id);
                clinician.setName(name);
                patientVisit.addAttendingDoctor(clinician);
            }
            doctors = pv1.getConsultingDoctor();
            for (XCN xcn : doctors) {
                String id = xcn.getIDNumber().encode();
                String name = xcn.getFamilyName().encode() + " " + xcn.getGivenName().encode();
                Clinician clinician = new Clinician();
                clinician.setId(id);
                clinician.setName(name);
                patientVisit.addConsultingDoctor(clinician);
            }
            ADTEvent adtEvent = new ADTEvent();
            adtEvent.setEvt(evt);
            adtEvent.setPatient(patient);
            adtEvent.setMsg(msg);
            adtEvent.setPv(patientVisit);
            adtEvents.add(adtEvent);
        } catch (HL7Exception e) {
            TRACE.error("Unable to parse HL7 message", e);
        }
    }
    return (Iterable<T>) adtEvents;
}