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Example 1 with ContactReferenceDto

use of de.symeda.sormas.api.contact.ContactReferenceDto in project SORMAS-Project by hzi-braunschweig.

the class ContactFacadeEjb method convertToReferenceDto.

private ContactReferenceDto convertToReferenceDto(Contact source) {
    ContactReferenceDto dto = toReferenceDto(source);
    if (source != null && dto != null) {
        final ContactJurisdictionFlagsDto contactJurisdictionFlagsDto = service.inJurisdictionOrOwned(source);
        boolean isInJurisdiction = contactJurisdictionFlagsDto.getInJurisdiction();
        Pseudonymizer pseudonymizer = Pseudonymizer.getDefault(userService::hasRight);
        pseudonymizer.pseudonymizeDto(ContactReferenceDto.class, dto, isInJurisdiction, (c) -> {
            if (source.getCaze() != null) {
                pseudonymizer.pseudonymizeDto(ContactReferenceDto.PersonName.class, c.getCaseName(), contactJurisdictionFlagsDto.getCaseInJurisdiction(), null);
            }
            pseudonymizer.pseudonymizeDto(ContactReferenceDto.PersonName.class, c.getContactName(), isInJurisdiction, null);
        });
    }
    return dto;
}
Also used : Pseudonymizer(de.symeda.sormas.backend.util.Pseudonymizer) ContactReferenceDto(de.symeda.sormas.api.contact.ContactReferenceDto)

Example 2 with ContactReferenceDto

use of de.symeda.sormas.api.contact.ContactReferenceDto in project SORMAS-Project by hzi-braunschweig.

the class VisitFacadeEjbTest method testCreateExternalVisit.

@Test
public void testCreateExternalVisit() {
    TestDataCreator.RDCFEntities rdcf = creator.createRDCFEntities("Region", "District", "Community", "Facility");
    UserDto user = creator.createUser(rdcf.region.getUuid(), rdcf.district.getUuid(), rdcf.facility.getUuid(), "Ext", "Vis", UserRole.REST_EXTERNAL_VISITS_USER);
    PersonDto cazePerson = creator.createPerson("Case", "Person");
    CaseDataDto caze = creator.createCase(user.toReference(), cazePerson.toReference(), Disease.EVD, CaseClassification.PROBABLE, InvestigationStatus.PENDING, new Date(), rdcf);
    PersonDto contactPerson = creator.createPerson("Contact", "Person");
    ContactDto contact = creator.createContact(user.toReference(), user.toReference(), contactPerson.toReference(), caze, new Date(), new Date(), null);
    final ExternalVisitDto externalVisitDto = new ExternalVisitDto();
    externalVisitDto.setPersonUuid(contactPerson.getUuid());
    externalVisitDto.setDisease(contact.getDisease());
    externalVisitDto.setVisitDateTime(new Date());
    externalVisitDto.setVisitStatus(VisitStatus.COOPERATIVE);
    final String visitRemarks = "Everything good";
    externalVisitDto.setVisitRemarks(visitRemarks);
    final ExternalVisitDto externalVisitDto2 = new ExternalVisitDto();
    externalVisitDto2.setPersonUuid(cazePerson.getUuid());
    externalVisitDto2.setDisease(caze.getDisease());
    externalVisitDto2.setVisitDateTime(new Date());
    externalVisitDto2.setVisitStatus(VisitStatus.COOPERATIVE);
    final String visitRemarks2 = "Everything good 2";
    externalVisitDto2.setVisitRemarks(visitRemarks2);
    final VisitFacade visitFacade = getVisitFacade();
    visitFacade.saveExternalVisit(externalVisitDto);
    visitFacade.saveExternalVisit(externalVisitDto2);
    final VisitCriteria visitCriteria = new VisitCriteria();
    final List<VisitIndexDto> visitIndexList = visitFacade.getIndexList(visitCriteria.contact(new ContactReferenceDto(contact.getUuid())), 0, 100, null);
    assertNotNull(visitIndexList);
    assertEquals(1, visitIndexList.size());
    VisitIndexDto visitIndexDto = visitIndexList.get(0);
    assertNotNull(visitIndexDto.getVisitDateTime());
    assertEquals(VisitStatus.COOPERATIVE, visitIndexDto.getVisitStatus());
    assertEquals(visitRemarks, visitIndexDto.getVisitRemarks());
    assertEquals(VisitOrigin.EXTERNAL_JOURNAL, visitIndexDto.getOrigin());
    final VisitCriteria visitCriteria2 = new VisitCriteria();
    final List<VisitIndexDto> visitIndexList2 = visitFacade.getIndexList(visitCriteria2.caze(new CaseReferenceDto(caze.getUuid())), 0, 100, null);
    assertNotNull(visitIndexList2);
    assertEquals(1, visitIndexList2.size());
    VisitIndexDto visitIndexDto2 = visitIndexList2.get(0);
    assertNotNull(visitIndexDto2.getVisitDateTime());
    assertEquals(VisitStatus.COOPERATIVE, visitIndexDto2.getVisitStatus());
    assertEquals(visitRemarks2, visitIndexDto2.getVisitRemarks());
    assertEquals(VisitOrigin.EXTERNAL_JOURNAL, visitIndexDto.getOrigin());
}
Also used : ExternalVisitDto(de.symeda.sormas.api.visit.ExternalVisitDto) CaseDataDto(de.symeda.sormas.api.caze.CaseDataDto) PersonDto(de.symeda.sormas.api.person.PersonDto) UserDto(de.symeda.sormas.api.user.UserDto) Date(java.util.Date) VisitIndexDto(de.symeda.sormas.api.visit.VisitIndexDto) ContactDto(de.symeda.sormas.api.contact.ContactDto) ContactReferenceDto(de.symeda.sormas.api.contact.ContactReferenceDto) TestDataCreator(de.symeda.sormas.backend.TestDataCreator) VisitCriteria(de.symeda.sormas.api.visit.VisitCriteria) VisitFacade(de.symeda.sormas.api.visit.VisitFacade) CaseReferenceDto(de.symeda.sormas.api.caze.CaseReferenceDto) AbstractBeanTest(de.symeda.sormas.backend.AbstractBeanTest) Test(org.junit.Test)

Example 3 with ContactReferenceDto

use of de.symeda.sormas.api.contact.ContactReferenceDto in project SORMAS-Project by hzi-braunschweig.

the class CaseFacadeEjbTest method testMergeCase.

@Test
public void testMergeCase() throws IOException {
    useNationalUserLogin();
    // 1. Create
    // Create leadCase
    UserDto leadUser = creator.createUser("", "", "", "First", "User");
    UserReferenceDto leadUserReference = new UserReferenceDto(leadUser.getUuid());
    PersonDto leadPerson = creator.createPerson("Alex", "Miller");
    PersonReferenceDto leadPersonReference = new PersonReferenceDto(leadPerson.getUuid());
    RDCF leadRdcf = creator.createRDCF();
    CaseDataDto leadCase = creator.createCase(leadUserReference, leadPersonReference, Disease.DENGUE, CaseClassification.SUSPECT, InvestigationStatus.PENDING, new Date(), leadRdcf, (c) -> {
        c.setAdditionalDetails("Test additional details");
        c.setFollowUpComment("Test followup comment");
    });
    leadCase.setClinicianEmail("mail");
    leadCase.getEpiData().setActivityAsCaseDetailsKnown(YesNoUnknown.NO);
    getCaseFacade().save(leadCase);
    VisitDto leadVisit = creator.createVisit(leadCase.getDisease(), leadCase.getPerson(), leadCase.getReportDate());
    leadVisit.getSymptoms().setAnorexiaAppetiteLoss(SymptomState.YES);
    getVisitFacade().saveVisit(leadVisit);
    // Create otherCase
    UserDto otherUser = creator.createUser("", "", "", "Second", "User");
    UserReferenceDto otherUserReference = new UserReferenceDto(otherUser.getUuid());
    PersonDto otherPerson = creator.createPerson("Max", "Smith");
    otherPerson.setBirthWeight(2);
    getPersonFacade().savePerson(otherPerson);
    PersonReferenceDto otherPersonReference = new PersonReferenceDto(otherPerson.getUuid());
    RDCF otherRdcf = creator.createRDCF("Reg2", "Dis2", "Comm2", "Fac2", "Poe2");
    CaseDataDto otherCase = creator.createCase(otherUserReference, otherPersonReference, Disease.CHOLERA, CaseClassification.SUSPECT, InvestigationStatus.PENDING, new Date(), otherRdcf, (c) -> {
        c.setAdditionalDetails("Test other additional details");
        c.setFollowUpComment("Test other followup comment");
    });
    otherCase.setClinicianName("name");
    CaseReferenceDto otherCaseReference = getCaseFacade().getReferenceByUuid(otherCase.getUuid());
    ContactDto contact = creator.createContact(otherUserReference, otherUserReference, otherPersonReference, otherCase, new Date(), new Date(), null);
    Region region = creator.createRegion("");
    District district = creator.createDistrict("", region);
    SampleDto sample = creator.createSample(otherCaseReference, otherUserReference, creator.createFacility("", region, district, creator.createCommunity("", district)));
    TaskDto task = creator.createTask(TaskContext.CASE, TaskType.CASE_INVESTIGATION, TaskStatus.PENDING, otherCaseReference, new ContactReferenceDto(), new EventReferenceDto(), new Date(), otherUserReference);
    TreatmentDto treatment = creator.createTreatment(otherCase);
    PrescriptionDto prescription = creator.createPrescription(otherCase);
    ClinicalVisitDto visit = creator.createClinicalVisit(otherCase);
    otherCase.getEpiData().setActivityAsCaseDetailsKnown(YesNoUnknown.YES);
    final ArrayList<ActivityAsCaseDto> otherActivitiesAsCase = new ArrayList<>();
    ActivityAsCaseDto activityAsCaseDto = new ActivityAsCaseDto();
    activityAsCaseDto.setActivityAsCaseType(ActivityAsCaseType.GATHERING);
    otherActivitiesAsCase.add(activityAsCaseDto);
    otherCase.getEpiData().setActivitiesAsCase(otherActivitiesAsCase);
    getCaseFacade().save(otherCase);
    VisitDto otherVisit = creator.createVisit(otherCase.getDisease(), otherCase.getPerson(), otherCase.getReportDate());
    otherVisit.getSymptoms().setAbdominalPain(SymptomState.YES);
    getVisitFacade().saveVisit(otherVisit);
    EventDto event = creator.createEvent(otherUserReference);
    event.setDisease(otherCase.getDisease());
    getEventFacade().save(event);
    EventParticipantDto otherCaseEventParticipant = creator.createEventParticipant(event.toReference(), otherPerson, otherUserReference);
    otherCaseEventParticipant.setResultingCase(otherCaseReference);
    getEventParticipantFacade().saveEventParticipant(otherCaseEventParticipant);
    creator.createSurveillanceReport(otherUserReference, otherCaseReference);
    TravelEntryDto travelEntry = creator.createTravelEntry(otherPersonReference, otherUserReference, otherCase.getDisease(), otherRdcf.region, otherRdcf.district, otherRdcf.pointOfEntry);
    travelEntry.setResultingCase(otherCaseReference);
    travelEntry = getTravelEntryFacade().save(travelEntry);
    DocumentDto document = creator.createDocument(leadUserReference, "document.pdf", "application/pdf", 42L, DocumentRelatedEntityType.CASE, leadCase.getUuid(), "content".getBytes(StandardCharsets.UTF_8));
    DocumentDto otherDocument = creator.createDocument(leadUserReference, "other_document.pdf", "application/pdf", 42L, DocumentRelatedEntityType.CASE, otherCase.getUuid(), "other content".getBytes(StandardCharsets.UTF_8));
    // 2. Merge
    getCaseFacade().mergeCase(leadCase.getUuid(), otherCase.getUuid());
    // 3. Test
    CaseDataDto mergedCase = getCaseFacade().getCaseDataByUuid(leadCase.getUuid());
    // Check no values
    assertNull(mergedCase.getClassificationComment());
    // Check 'lead and other have different values'
    assertEquals(leadCase.getDisease(), mergedCase.getDisease());
    // Check 'lead has value, other has not'
    assertEquals(leadCase.getClinicianEmail(), mergedCase.getClinicianEmail());
    // Check 'lead has no value, other has'
    assertEquals(otherCase.getClinicianName(), mergedCase.getClinicianName());
    PersonDto mergedPerson = getPersonFacade().getPersonByUuid(mergedCase.getPerson().getUuid());
    // Check no values
    assertNull(mergedPerson.getBirthdateDD());
    // Check 'lead and other have different values'
    assertEquals(leadCase.getPerson().getFirstName(), mergedPerson.getFirstName());
    // Check 'lead has value, other has not'
    assertEquals(leadCase.getPerson().getLastName(), mergedPerson.getLastName());
    // Check 'lead has no value, other has'
    assertEquals(otherPerson.getBirthWeight(), mergedPerson.getBirthWeight());
    // Check merge comments
    assertEquals("Test additional details Test other additional details", mergedCase.getAdditionalDetails());
    assertEquals("Test followup comment Test other followup comment", mergedCase.getFollowUpComment());
    // 4. Test Reference Changes
    // 4.1 Contacts
    List<String> contactUuids = new ArrayList<>();
    contactUuids.add(contact.getUuid());
    assertEquals(leadCase.getUuid(), getContactFacade().getByUuids(contactUuids).get(0).getCaze().getUuid());
    // 4.2 Samples
    List<String> sampleUuids = new ArrayList<>();
    sampleUuids.add(sample.getUuid());
    assertEquals(leadCase.getUuid(), getSampleFacade().getByUuids(sampleUuids).get(0).getAssociatedCase().getUuid());
    // 4.3 Tasks
    List<String> taskUuids = new ArrayList<>();
    taskUuids.add(task.getUuid());
    assertEquals(leadCase.getUuid(), getTaskFacade().getByUuids(taskUuids).get(0).getCaze().getUuid());
    // 4.4 Treatments
    List<String> treatmentUuids = new ArrayList<>();
    treatmentUuids.add(treatment.getUuid());
    assertEquals(leadCase.getTherapy().getUuid(), getTreatmentFacade().getByUuids(treatmentUuids).get(0).getTherapy().getUuid());
    // 4.5 Prescriptions
    List<String> prescriptionUuids = new ArrayList<>();
    prescriptionUuids.add(prescription.getUuid());
    assertEquals(leadCase.getTherapy().getUuid(), getPrescriptionFacade().getByUuids(prescriptionUuids).get(0).getTherapy().getUuid());
    // 4.6 Clinical Visits
    List<String> visitUuids = new ArrayList<>();
    visitUuids.add(visit.getUuid());
    assertEquals(leadCase.getClinicalCourse().getUuid(), getClinicalVisitFacade().getByUuids(visitUuids).get(0).getClinicalCourse().getUuid());
    // 4.7 Visits;
    List<String> mergedVisits = getVisitFacade().getIndexList(new VisitCriteria().caze(mergedCase.toReference()), null, null, null).stream().map(VisitIndexDto::getUuid).collect(Collectors.toList());
    assertEquals(2, mergedVisits.size());
    assertTrue(mergedVisits.contains(leadVisit.getUuid()));
    assertTrue(mergedVisits.contains(otherVisit.getUuid()));
    // and symptoms
    assertEquals(SymptomState.YES, mergedCase.getSymptoms().getAbdominalPain());
    assertEquals(SymptomState.YES, mergedCase.getSymptoms().getAnorexiaAppetiteLoss());
    assertTrue(mergedCase.getSymptoms().getSymptomatic());
    // 4.8 Linked Events
    assertEquals(1, getEventFacade().count(new EventCriteria().caze(mergedCase.toReference())));
    // 4.8 Linked Surveillance Reports
    List<SurveillanceReportDto> surveillanceReportList = getSurveillanceReportFacade().getByCaseUuids(Collections.singletonList(mergedCase.getUuid()));
    MatcherAssert.assertThat(surveillanceReportList, hasSize(1));
    // 5 Documents
    List<DocumentDto> mergedDocuments = getDocumentFacade().getDocumentsRelatedToEntity(DocumentRelatedEntityType.CASE, leadCase.getUuid());
    assertEquals(2, mergedDocuments.size());
    List<String> documentUuids = mergedDocuments.stream().map(DocumentDto::getUuid).collect(Collectors.toList());
    assertTrue(documentUuids.contains(document.getUuid()));
    assertTrue(documentUuids.contains(otherDocument.getUuid()));
    // 10 Activities as case
    final EpiDataDto epiData = mergedCase.getEpiData();
    assertEquals(YesNoUnknown.YES, epiData.getActivityAsCaseDetailsKnown());
    final List<ActivityAsCaseDto> activitiesAsCase = epiData.getActivitiesAsCase();
    assertEquals(1, activitiesAsCase.size());
    assertEquals(ActivityAsCaseType.GATHERING, activitiesAsCase.get(0).getActivityAsCaseType());
    // Travel entry
    travelEntry = getTravelEntryFacade().getByUuid(travelEntry.getUuid());
    assertEquals(mergedCase.toReference(), travelEntry.getResultingCase());
}
Also used : UserDto(de.symeda.sormas.api.user.UserDto) PersonReferenceDto(de.symeda.sormas.api.person.PersonReferenceDto) ArrayList(java.util.ArrayList) Matchers.isEmptyOrNullString(org.hamcrest.Matchers.isEmptyOrNullString) EventCriteria(de.symeda.sormas.api.event.EventCriteria) TreatmentDto(de.symeda.sormas.api.therapy.TreatmentDto) ActivityAsCaseDto(de.symeda.sormas.api.activityascase.ActivityAsCaseDto) ContactDto(de.symeda.sormas.api.contact.ContactDto) PrescriptionDto(de.symeda.sormas.api.therapy.PrescriptionDto) VisitCriteria(de.symeda.sormas.api.visit.VisitCriteria) EpiDataDto(de.symeda.sormas.api.epidata.EpiDataDto) CaseDataDto(de.symeda.sormas.api.caze.CaseDataDto) CasePersonDto(de.symeda.sormas.api.caze.CasePersonDto) PersonDto(de.symeda.sormas.api.person.PersonDto) TravelEntryDto(de.symeda.sormas.api.travelentry.TravelEntryDto) EventDto(de.symeda.sormas.api.event.EventDto) EventParticipantDto(de.symeda.sormas.api.event.EventParticipantDto) TaskDto(de.symeda.sormas.api.task.TaskDto) Date(java.util.Date) LocalDate(java.time.LocalDate) UserReferenceDto(de.symeda.sormas.api.user.UserReferenceDto) RDCF(de.symeda.sormas.backend.TestDataCreator.RDCF) EventReferenceDto(de.symeda.sormas.api.event.EventReferenceDto) ClinicalVisitDto(de.symeda.sormas.api.clinicalcourse.ClinicalVisitDto) ContactReferenceDto(de.symeda.sormas.api.contact.ContactReferenceDto) DocumentDto(de.symeda.sormas.api.document.DocumentDto) Region(de.symeda.sormas.backend.infrastructure.region.Region) ClinicalVisitDto(de.symeda.sormas.api.clinicalcourse.ClinicalVisitDto) VisitDto(de.symeda.sormas.api.visit.VisitDto) SurveillanceReportDto(de.symeda.sormas.api.caze.surveillancereport.SurveillanceReportDto) District(de.symeda.sormas.backend.infrastructure.district.District) SampleDto(de.symeda.sormas.api.sample.SampleDto) CaseReferenceDto(de.symeda.sormas.api.caze.CaseReferenceDto) AbstractBeanTest(de.symeda.sormas.backend.AbstractBeanTest) Test(org.junit.Test)

Example 4 with ContactReferenceDto

use of de.symeda.sormas.api.contact.ContactReferenceDto in project SORMAS-Project by hzi-braunschweig.

the class SampleController method getDiseaseOf.

public Disease getDiseaseOf(SampleDto sample) {
    CaseReferenceDto cazeRef = sample.getAssociatedCase();
    if (cazeRef != null) {
        return FacadeProvider.getCaseFacade().getByUuid(cazeRef.getUuid()).getDisease();
    }
    ContactReferenceDto contactRef = sample.getAssociatedContact();
    if (contactRef != null) {
        return FacadeProvider.getContactFacade().getByUuid(contactRef.getUuid()).getDisease();
    }
    EventParticipantReferenceDto eventPartRef = sample.getAssociatedEventParticipant();
    if (eventPartRef != null) {
        EventReferenceDto eventRef = FacadeProvider.getEventParticipantFacade().getByUuid(eventPartRef.getUuid()).getEvent();
        if (eventRef != null) {
            return FacadeProvider.getEventFacade().getEventByUuid(eventRef.getUuid(), false).getDisease();
        }
    }
    return null;
}
Also used : EventReferenceDto(de.symeda.sormas.api.event.EventReferenceDto) ContactReferenceDto(de.symeda.sormas.api.contact.ContactReferenceDto) EventParticipantReferenceDto(de.symeda.sormas.api.event.EventParticipantReferenceDto) CaseReferenceDto(de.symeda.sormas.api.caze.CaseReferenceDto)

Example 5 with ContactReferenceDto

use of de.symeda.sormas.api.contact.ContactReferenceDto in project SORMAS-Project by hzi-braunschweig.

the class SampleDataView method initView.

@Override
protected void initView(String params) {
    setHeightUndefined();
    String htmlLayout = LayoutUtil.fluidRow(LayoutUtil.fluidColumnLoc(8, 0, 12, 0, EDIT_LOC), LayoutUtil.fluidColumnLoc(4, 0, 6, 0, CASE_LOC), LayoutUtil.fluidColumnLoc(4, 0, 6, 0, CONTACT_LOC), LayoutUtil.fluidColumnLoc(4, 0, 6, 0, EVENT_PARTICIPANT_LOC), LayoutUtil.fluidColumnLoc(4, 0, 6, 0, PATHOGEN_TESTS_LOC), LayoutUtil.fluidColumnLoc(4, 0, 6, 0, ADDITIONAL_TESTS_LOC), LayoutUtil.fluidColumnLoc(4, 0, 6, 0, SORMAS_TO_SORMAS_LOC));
    DetailSubComponentWrapper container = new DetailSubComponentWrapper(() -> editComponent);
    container.setWidth(100, Unit.PERCENTAGE);
    container.setMargin(true);
    setSubComponent(container);
    CustomLayout layout = new CustomLayout();
    layout.addStyleName(CssStyles.ROOT_COMPONENT);
    layout.setTemplateContents(htmlLayout);
    layout.setWidth(100, Unit.PERCENTAGE);
    layout.setHeightUndefined();
    container.addComponent(layout);
    SampleDto sampleDto = FacadeProvider.getSampleFacade().getSampleByUuid(getSampleRef().getUuid());
    Disease disease = null;
    final CaseReferenceDto associatedCase = sampleDto.getAssociatedCase();
    if (associatedCase != null) {
        final CaseDataDto caseDto = FacadeProvider.getCaseFacade().getCaseDataByUuid(associatedCase.getUuid());
        disease = caseDto.getDisease();
        final CaseInfoLayout caseInfoLayout = new CaseInfoLayout(caseDto);
        caseInfoLayout.addStyleName(CssStyles.SIDE_COMPONENT);
        layout.addComponent(caseInfoLayout, CASE_LOC);
    }
    final ContactReferenceDto associatedContact = sampleDto.getAssociatedContact();
    if (associatedContact != null) {
        final ContactDto contactDto = FacadeProvider.getContactFacade().getByUuid(associatedContact.getUuid());
        disease = contactDto.getDisease();
        final ContactInfoLayout contactInfoLayout = new ContactInfoLayout(contactDto, UiFieldAccessCheckers.getDefault(contactDto.isPseudonymized()));
        contactInfoLayout.addStyleName(CssStyles.SIDE_COMPONENT);
        layout.addComponent(contactInfoLayout, CONTACT_LOC);
    }
    final EventParticipantReferenceDto associatedEventParticipant = sampleDto.getAssociatedEventParticipant();
    if (associatedEventParticipant != null) {
        final EventParticipantDto eventParticipantDto = FacadeProvider.getEventParticipantFacade().getEventParticipantByUuid(associatedEventParticipant.getUuid());
        final EventDto eventDto = FacadeProvider.getEventFacade().getEventByUuid(eventParticipantDto.getEvent().getUuid(), false);
        disease = eventDto.getDisease();
        final EventParticipantInfoLayout eventParticipantInfoLayout = new EventParticipantInfoLayout(eventParticipantDto, eventDto, UiFieldAccessCheckers.getDefault(eventParticipantDto.isPseudonymized()));
        eventParticipantInfoLayout.addStyleName(CssStyles.SIDE_COMPONENT);
        layout.addComponent(eventParticipantInfoLayout, EVENT_PARTICIPANT_LOC);
    }
    SampleController sampleController = ControllerProvider.getSampleController();
    editComponent = sampleController.getSampleEditComponent(getSampleRef().getUuid(), sampleDto.isPseudonymized(), disease, true);
    Consumer<Disease> createReferral = (relatedDisease) -> {
        // save changes before referral creation
        editComponent.commit();
        SampleDto committedSample = editComponent.getWrappedComponent().getValue();
        sampleController.createReferral(committedSample, relatedDisease);
    };
    Consumer<SampleDto> openReferredSample = referredSample -> sampleController.navigateToData(referredSample.getUuid());
    sampleController.addReferOrLinkToOtherLabButton(editComponent, disease, createReferral, openReferredSample);
    Consumer<SampleDto> navigate = targetSampleDto -> sampleController.navigateToData(targetSampleDto.getUuid());
    sampleController.addReferredFromButton(editComponent, navigate);
    editComponent.setMargin(new MarginInfo(false, false, true, false));
    editComponent.setWidth(100, Unit.PERCENTAGE);
    editComponent.getWrappedComponent().setWidth(100, Unit.PERCENTAGE);
    editComponent.addStyleName(CssStyles.MAIN_COMPONENT);
    layout.addComponent(editComponent, EDIT_LOC);
    BiConsumer<PathogenTestDto, Runnable> onSavedPathogenTest = (pathogenTestDto, callback) -> callback.run();
    // why? if(sampleDto.getSamplePurpose() !=null && sampleDto.getSamplePurpose().equals(SamplePurpose.EXTERNAL)) {
    Supplier<Boolean> createOrEditAllowedCallback = () -> editComponent.getWrappedComponent().getFieldGroup().isValid();
    SampleReferenceDto sampleReferenceDto = getSampleRef();
    PathogenTestListComponent pathogenTestListComponent = new PathogenTestListComponent(sampleReferenceDto);
    pathogenTestListComponent.addSideComponentCreateEventListener(e -> showNavigationConfirmPopupIfDirty(() -> {
        if (createOrEditAllowedCallback.get()) {
            ControllerProvider.getPathogenTestController().create(sampleReferenceDto, 0, pathogenTestListComponent::reload, onSavedPathogenTest);
        } else {
            Notification.show(null, I18nProperties.getString(Strings.messageFormHasErrorsPathogenTest), Notification.Type.ERROR_MESSAGE);
        }
    }));
    pathogenTestListComponent.addSideComponentEditEventListener(e -> showNavigationConfirmPopupIfDirty(() -> {
        String uuid = e.getUuid();
        if (createOrEditAllowedCallback.get()) {
            ControllerProvider.getPathogenTestController().edit(uuid, pathogenTestListComponent::reload, onSavedPathogenTest);
        } else {
            Notification.show(null, I18nProperties.getString(Strings.messageFormHasErrorsPathogenTest), Notification.Type.ERROR_MESSAGE);
        }
    }));
    layout.addComponent(new SideComponentLayout(pathogenTestListComponent), PATHOGEN_TESTS_LOC);
    if (UserProvider.getCurrent() != null && UserProvider.getCurrent().hasUserRight(UserRight.ADDITIONAL_TEST_VIEW) && FacadeProvider.getFeatureConfigurationFacade().isFeatureEnabled(FeatureType.ADDITIONAL_TESTS)) {
        AdditionalTestListComponent additionalTestList = new AdditionalTestListComponent(sampleReferenceDto.getUuid());
        additionalTestList.addStyleName(CssStyles.SIDE_COMPONENT);
        layout.addComponent(additionalTestList, ADDITIONAL_TESTS_LOC);
    }
    boolean sormasToSormasEnabled = FacadeProvider.getSormasToSormasFacade().isSharingCasesContactsAndSamplesEnabledForUser();
    if (sormasToSormasEnabled || sampleDto.getSormasToSormasOriginInfo() != null) {
        VerticalLayout sormasToSormasLocLayout = new VerticalLayout();
        sormasToSormasLocLayout.setMargin(false);
        sormasToSormasLocLayout.setSpacing(false);
        SormasToSormasListComponent sormasToSormasListComponent = new SormasToSormasListComponent(sampleDto);
        sormasToSormasListComponent.addStyleNames(CssStyles.SIDE_COMPONENT);
        sormasToSormasLocLayout.addComponent(sormasToSormasListComponent);
        layout.addComponent(sormasToSormasLocLayout, SORMAS_TO_SORMAS_LOC);
    }
    // }
    setSampleEditPermission(container);
}
Also used : FeatureType(de.symeda.sormas.api.feature.FeatureType) SideComponentLayout(de.symeda.sormas.ui.utils.components.sidecomponent.SideComponentLayout) FacadeProvider(de.symeda.sormas.api.FacadeProvider) I18nProperties(de.symeda.sormas.api.i18n.I18nProperties) PathogenTestListComponent(de.symeda.sormas.ui.samples.pathogentestlink.PathogenTestListComponent) VerticalLayout(com.vaadin.ui.VerticalLayout) EventParticipantDto(de.symeda.sormas.api.event.EventParticipantDto) Supplier(java.util.function.Supplier) CustomLayout(com.vaadin.ui.CustomLayout) DetailSubComponentWrapper(de.symeda.sormas.ui.utils.DetailSubComponentWrapper) ControllerProvider(de.symeda.sormas.ui.ControllerProvider) CaseReferenceDto(de.symeda.sormas.api.caze.CaseReferenceDto) SampleReferenceDto(de.symeda.sormas.api.sample.SampleReferenceDto) CssStyles(de.symeda.sormas.ui.utils.CssStyles) Notification(com.vaadin.ui.Notification) CaseInfoLayout(de.symeda.sormas.ui.caze.CaseInfoLayout) CommitDiscardWrapperComponent(de.symeda.sormas.ui.utils.CommitDiscardWrapperComponent) BiConsumer(java.util.function.BiConsumer) PathogenTestDto(de.symeda.sormas.api.sample.PathogenTestDto) EventParticipantReferenceDto(de.symeda.sormas.api.event.EventParticipantReferenceDto) UserProvider(de.symeda.sormas.ui.UserProvider) EventParticipantInfoLayout(de.symeda.sormas.ui.events.EventParticipantInfoLayout) CaseDataDto(de.symeda.sormas.api.caze.CaseDataDto) EventDto(de.symeda.sormas.api.event.EventDto) MarginInfo(com.vaadin.shared.ui.MarginInfo) SormasToSormasListComponent(de.symeda.sormas.ui.sormastosormas.SormasToSormasListComponent) ContactInfoLayout(de.symeda.sormas.ui.contact.ContactInfoLayout) Consumer(java.util.function.Consumer) UserRight(de.symeda.sormas.api.user.UserRight) LayoutUtil(de.symeda.sormas.ui.utils.LayoutUtil) Disease(de.symeda.sormas.api.Disease) SampleDto(de.symeda.sormas.api.sample.SampleDto) ContactDto(de.symeda.sormas.api.contact.ContactDto) ContactReferenceDto(de.symeda.sormas.api.contact.ContactReferenceDto) Strings(de.symeda.sormas.api.i18n.Strings) UiFieldAccessCheckers(de.symeda.sormas.api.utils.fieldaccess.UiFieldAccessCheckers) ContactInfoLayout(de.symeda.sormas.ui.contact.ContactInfoLayout) Disease(de.symeda.sormas.api.Disease) PathogenTestDto(de.symeda.sormas.api.sample.PathogenTestDto) SideComponentLayout(de.symeda.sormas.ui.utils.components.sidecomponent.SideComponentLayout) PathogenTestListComponent(de.symeda.sormas.ui.samples.pathogentestlink.PathogenTestListComponent) MarginInfo(com.vaadin.shared.ui.MarginInfo) ContactDto(de.symeda.sormas.api.contact.ContactDto) VerticalLayout(com.vaadin.ui.VerticalLayout) EventParticipantInfoLayout(de.symeda.sormas.ui.events.EventParticipantInfoLayout) DetailSubComponentWrapper(de.symeda.sormas.ui.utils.DetailSubComponentWrapper) SampleReferenceDto(de.symeda.sormas.api.sample.SampleReferenceDto) CaseDataDto(de.symeda.sormas.api.caze.CaseDataDto) SormasToSormasListComponent(de.symeda.sormas.ui.sormastosormas.SormasToSormasListComponent) EventDto(de.symeda.sormas.api.event.EventDto) EventParticipantDto(de.symeda.sormas.api.event.EventParticipantDto) CaseInfoLayout(de.symeda.sormas.ui.caze.CaseInfoLayout) CustomLayout(com.vaadin.ui.CustomLayout) ContactReferenceDto(de.symeda.sormas.api.contact.ContactReferenceDto) EventParticipantReferenceDto(de.symeda.sormas.api.event.EventParticipantReferenceDto) SampleDto(de.symeda.sormas.api.sample.SampleDto) CaseReferenceDto(de.symeda.sormas.api.caze.CaseReferenceDto)

Aggregations

ContactReferenceDto (de.symeda.sormas.api.contact.ContactReferenceDto)26 CaseReferenceDto (de.symeda.sormas.api.caze.CaseReferenceDto)18 EventParticipantReferenceDto (de.symeda.sormas.api.event.EventParticipantReferenceDto)12 CaseDataDto (de.symeda.sormas.api.caze.CaseDataDto)11 ContactDto (de.symeda.sormas.api.contact.ContactDto)11 Date (java.util.Date)11 SampleDto (de.symeda.sormas.api.sample.SampleDto)9 UserReferenceDto (de.symeda.sormas.api.user.UserReferenceDto)8 ArrayList (java.util.ArrayList)7 EventReferenceDto (de.symeda.sormas.api.event.EventReferenceDto)6 I18nProperties (de.symeda.sormas.api.i18n.I18nProperties)6 PersonReferenceDto (de.symeda.sormas.api.person.PersonReferenceDto)6 List (java.util.List)6 Disease (de.symeda.sormas.api.Disease)5 EventParticipantDto (de.symeda.sormas.api.event.EventParticipantDto)5 DistrictReferenceDto (de.symeda.sormas.api.infrastructure.district.DistrictReferenceDto)5 RegionReferenceDto (de.symeda.sormas.api.infrastructure.region.RegionReferenceDto)5 PersonDto (de.symeda.sormas.api.person.PersonDto)5 VisitCriteria (de.symeda.sormas.api.visit.VisitCriteria)5 Test (org.junit.Test)5