Examples with ItemizationDataTableView de.unijena.cheminf.mortar.gui.views.ItemizationDataTableView used on opensource projects

Example 1 with ItemizationDataTableView

use of de.unijena.cheminf.mortar.gui.views.ItemizationDataTableView in project MORTAR by FelixBaensch.

the class MainViewController method addFragmentationResultTabs.

// 
/**
 * Adds a tab for fragments and a tab for items (results of fragmentation)
 *
 * @param aFragmentationName
 */
private void addFragmentationResultTabs(String aFragmentationName) {
    // fragments tab
    FragmentsDataTableView tmpFragmentsDataTableView = new FragmentsDataTableView();
    GridTabForTableView tmpFragmentsTab = new GridTabForTableView(Message.get("MainTabPane.fragmentsTab.title") + " - " + aFragmentationName, TabNames.Fragments.name(), tmpFragmentsDataTableView);
    this.mainTabPane.getTabs().add(tmpFragmentsTab);
    ObservableList<MoleculeDataModel> tmpList = FXCollections.observableArrayList(this.mapOfFragmentDataModelLists.get(aFragmentationName));
    tmpFragmentsDataTableView.setItemsList(tmpList);
    int tmpRowsPerPage = this.settingsContainer.getRowsPerPageSetting();
    int tmpPageCount = tmpList.size() / tmpRowsPerPage;
    if (tmpList.size() % tmpRowsPerPage > 0) {
        tmpPageCount++;
    }
    Pagination tmpPagination = new Pagination(tmpPageCount, 0);
    tmpPagination.setPageFactory((pageIndex) -> tmpFragmentsDataTableView.createFragmentsTableViewPage(pageIndex, this.settingsContainer));
    VBox.setVgrow(tmpPagination, Priority.ALWAYS);
    HBox.setHgrow(tmpPagination, Priority.ALWAYS);
    tmpFragmentsTab.addPaginationToGridPane(tmpPagination, 0, 0, 2, 2);
    Button tmpExportCsvButton = new Button(Message.get("MainTabPane.fragments.buttonCSV.txt"));
    tmpExportCsvButton.setTooltip(new Tooltip(Message.get("MainTabPane.fragments.buttonCSV.tooltip")));
    Button tmpExportPdfButton = new Button(Message.get("MainTabPane.fragments.buttonPDF.txt"));
    tmpExportPdfButton.setTooltip(new Tooltip(Message.get("MainTabPane.fragments.buttonPDF.tooltip")));
    Button tmpCancelExportButton = new Button(Message.get("MainTabPane.fragments.buttonCancelExport.txt"));
    tmpCancelExportButton.setTooltip(new Tooltip(Message.get("MainTabPane.fragments.buttonCancelExport.tooltip")));
    tmpCancelExportButton.visibleProperty().bind(this.isExportRunningProperty);
    ButtonBar tmpButtonBarFragments = new ButtonBar();
    tmpButtonBarFragments.setPadding(new Insets(0, 0, 0, 0));
    tmpExportCsvButton.setPrefWidth(GuiDefinitions.GUI_BUTTON_WIDTH_VALUE);
    tmpExportCsvButton.setPrefHeight(GuiDefinitions.GUI_BUTTON_HEIGHT_VALUE);
    tmpExportPdfButton.setPrefWidth(GuiDefinitions.GUI_BUTTON_WIDTH_VALUE);
    tmpExportPdfButton.setPrefHeight(GuiDefinitions.GUI_BUTTON_HEIGHT_VALUE);
    tmpCancelExportButton.setPrefWidth(GuiDefinitions.GUI_BUTTON_WIDTH_VALUE);
    tmpCancelExportButton.setPrefHeight(GuiDefinitions.GUI_BUTTON_HEIGHT_VALUE);
    tmpButtonBarFragments.getButtons().addAll(tmpExportCsvButton, tmpExportPdfButton, tmpCancelExportButton);
    tmpFragmentsTab.addNodeToGridPane(tmpButtonBarFragments, 0, 1, 1, 1);
    tmpExportPdfButton.setOnAction(event -> this.exportFile(Exporter.ExportTypes.FRAGMENT_PDF_FILE));
    tmpExportCsvButton.setOnAction(event -> this.exportFile(Exporter.ExportTypes.FRAGMENT_CSV_FILE));
    tmpCancelExportButton.setOnAction(event -> this.interruptExport());
    tmpFragmentsDataTableView.setOnSort((EventHandler<SortEvent<TableView>>) event -> {
        GuiUtil.sortTableViewGlobally(event, tmpPagination, tmpRowsPerPage);
    });
    tmpFragmentsDataTableView.addTableViewHeightListener(this.settingsContainer);
    tmpFragmentsDataTableView.getCopyMenuItem().setOnAction(event -> GuiUtil.copySelectedTableViewCellsToClipboard(tmpFragmentsDataTableView));
    tmpFragmentsDataTableView.setOnKeyPressed(event -> {
        if (GuiDefinitions.KEY_CODE_COPY.match(event)) {
            GuiUtil.copySelectedTableViewCellsToClipboard(tmpFragmentsDataTableView);
        }
    });
    // itemization tab
    // tmpAmount is the number of fragments appearing in the molecule with the highest number of fragments
    int tmpAmount = 0;
    for (int i = 0; i < this.moleculeDataModelList.size(); i++) {
        if (!this.moleculeDataModelList.get(i).hasMoleculeUndergoneSpecificFragmentation(aFragmentationName)) {
            continue;
        }
        HashMap<String, Integer> tmpCurrentFragmentsMap = this.moleculeDataModelList.get(i).getFragmentFrequencyOfSpecificAlgorithm(aFragmentationName);
        if (tmpCurrentFragmentsMap == null) {
            // redundant, see if clause above
            continue;
        }
        int tmpNrOfFragmentsOfCurrentMolecule = tmpCurrentFragmentsMap.size();
        tmpAmount = Math.max(tmpAmount, tmpNrOfFragmentsOfCurrentMolecule);
    }
    ItemizationDataTableView tmpItemizationDataTableView = new ItemizationDataTableView(tmpAmount, aFragmentationName);
    tmpItemizationDataTableView.setItemsList(this.moleculeDataModelList);
    GridTabForTableView tmpItemizationTab = new GridTabForTableView(Message.get("MainTabPane.itemizationTab.title") + " - " + aFragmentationName, TabNames.Itemization.name(), tmpItemizationDataTableView);
    this.mainTabPane.getTabs().add(tmpItemizationTab);
    tmpPageCount = this.moleculeDataModelList.size() / tmpRowsPerPage;
    if (this.moleculeDataModelList.size() % tmpRowsPerPage > 0) {
        tmpPageCount++;
    }
    Pagination tmpPaginationItems = new Pagination(tmpPageCount, 0);
    tmpPaginationItems.setPageFactory((pageIndex) -> tmpItemizationDataTableView.createItemizationTableViewPage(pageIndex, this.settingsContainer));
    VBox.setVgrow(tmpPaginationItems, Priority.ALWAYS);
    HBox.setHgrow(tmpPaginationItems, Priority.ALWAYS);
    tmpItemizationTab.addPaginationToGridPane(tmpPaginationItems, 0, 0, 2, 2);
    Button tmpItemizationTabExportPDfButton = new Button(Message.get("MainTabPane.itemizationTab.pdfButton.txt"));
    tmpItemizationTabExportPDfButton.setTooltip(new Tooltip(Message.get("MainTabPane.itemizationTab.pdfButton.tooltip")));
    Button tmpItemizationExportCsvButton = new Button(Message.get("MainTabPane.itemizationTab.csvButton.txt"));
    tmpItemizationExportCsvButton.setTooltip(new Tooltip(Message.get("MainTabPane.itemizationTab.csvButton.tooltip")));
    ButtonBar tmpButtonBarItemization = new ButtonBar();
    tmpButtonBarItemization.setPadding(new Insets(0, 0, 0, 0));
    tmpItemizationExportCsvButton.setPrefWidth(GuiDefinitions.GUI_BUTTON_WIDTH_VALUE);
    tmpItemizationExportCsvButton.setPrefHeight(GuiDefinitions.GUI_BUTTON_HEIGHT_VALUE);
    tmpItemizationTabExportPDfButton.setPrefWidth(GuiDefinitions.GUI_BUTTON_WIDTH_VALUE);
    tmpItemizationTabExportPDfButton.setPrefHeight(GuiDefinitions.GUI_BUTTON_HEIGHT_VALUE);
    tmpButtonBarItemization.getButtons().addAll(tmpItemizationExportCsvButton, tmpItemizationTabExportPDfButton, tmpCancelExportButton);
    tmpItemizationTab.addNodeToGridPane(tmpButtonBarItemization, 0, 1, 1, 1);
    tmpItemizationExportCsvButton.setOnAction(event -> this.exportFile(Exporter.ExportTypes.ITEM_CSV_FILE));
    tmpItemizationTabExportPDfButton.setOnAction(event -> this.exportFile(Exporter.ExportTypes.ITEM_PDF_FILE));
    tmpItemizationDataTableView.setOnSort((EventHandler<SortEvent<TableView>>) event -> {
        GuiUtil.sortTableViewGlobally(event, tmpPaginationItems, tmpRowsPerPage);
    });
    tmpItemizationDataTableView.addTableViewHeightListener(this.settingsContainer);
    tmpItemizationDataTableView.getCopyMenuItem().setOnAction(event -> GuiUtil.copySelectedTableViewCellsToClipboard(tmpItemizationDataTableView));
    tmpItemizationDataTableView.setOnKeyPressed(event -> {
        if (GuiDefinitions.KEY_CODE_COPY.match(event)) {
            GuiUtil.copySelectedTableViewCellsToClipboard(tmpItemizationDataTableView);
        }
    });
    // 
    this.mainTabPane.getSelectionModel().select(tmpFragmentsTab);
}

Example 2 with ItemizationDataTableView

use of de.unijena.cheminf.mortar.gui.views.ItemizationDataTableView in project MORTAR by FelixBaensch.

the class GuiUtil method setImageStructureHeight.

// 
/**
 * Sets the height for structure images to each MoleculeDataModel object of the items list of the tableView.
 * If image height is too small it will be set to GuiDefinitions.GUI_STRUCTURE_IMAGE_MIN_HEIGHT (50.0)
 *
 * @param aTableView TableView
 * @param aHeight double
 * @param aSettingsContainer SettingsContainer
 */
public static void setImageStructureHeight(TableView aTableView, double aHeight, SettingsContainer aSettingsContainer) {
    double tmpHeight = (aHeight - GuiDefinitions.GUI_TABLE_VIEW_HEADER_HEIGHT - GuiDefinitions.GUI_PAGINATION_CONTROL_PANEL_HEIGHT) / aSettingsContainer.getRowsPerPageSetting();
    if (aTableView.getClass().equals(ItemizationDataTableView.class)) {
        tmpHeight = (aHeight - 2 * GuiDefinitions.GUI_TABLE_VIEW_HEADER_HEIGHT - GuiDefinitions.GUI_PAGINATION_CONTROL_PANEL_HEIGHT) / aSettingsContainer.getRowsPerPageSetting();
    }
    if (tmpHeight < GuiDefinitions.GUI_STRUCTURE_IMAGE_MIN_HEIGHT) {
        tmpHeight = GuiDefinitions.GUI_STRUCTURE_IMAGE_MIN_HEIGHT;
    }
    if (aTableView.getClass().equals(ItemizationDataTableView.class)) {
        for (MoleculeDataModel tmpMoleculeDataModel : ((IDataTableView) aTableView).getItemsList()) {
            tmpMoleculeDataModel.setStructureImageHeight(tmpHeight);
            String tmpFragmentationName = ((ItemizationDataTableView) aTableView).getFragmentationName();
            if (!tmpMoleculeDataModel.hasMoleculeUndergoneSpecificFragmentation(tmpFragmentationName)) {
                continue;
            }
            for (FragmentDataModel tmpFragmentDataModel : tmpMoleculeDataModel.getFragmentsOfSpecificAlgorithm(tmpFragmentationName)) {
                tmpFragmentDataModel.setStructureImageHeight(tmpHeight);
            }
        }
    } else {
        for (MoleculeDataModel tmpMoleculeDataModel : ((IDataTableView) aTableView).getItemsList()) {
            tmpMoleculeDataModel.setStructureImageHeight(tmpHeight);
        }
    }
}