Examples with ResultsTable ij.measure.ResultsTable used on opensource projects

Example 16 with ResultsTable

use of ij.measure.ResultsTable in project TrakEM2 by trakem2.

the class Selection method measure.

/**
 * Call measure(ResultsTable) on every selected Displayable.
 */
public void measure() {
    Utils.log2("Selection.measure");
    final HashMap<Class<?>, ResultsTable> rts = new HashMap<Class<?>, ResultsTable>();
    for (final Displayable d : getSelected()) {
        Utils.log2("measured " + d);
        ResultsTable rt1 = rts.get(d.getClass());
        ResultsTable rt2 = d.measure(rt1);
        if (null == rt1 && null != rt2)
            rts.put(d.getClass(), rt2);
    }
    Utils.showAllTables(rts);
}

Example 17 with ResultsTable

use of ij.measure.ResultsTable in project TrakEM2 by trakem2.

the class Utils method createResultsTable.

/**
 * Creates a new ResultsTable with the given window title and column titles, and 2 decimals of precision, or if one exists for the given window title, returns it.
 */
public static final ResultsTable createResultsTable(final String title, final String[] columns) {
    try {
        return new TaskOnEDT<ResultsTable>(new Callable<ResultsTable>() {

            @Override
            public ResultsTable call() {
                final TextWindow tw = (TextWindow) WindowManager.getFrame(title);
                if (null != tw) {
                    // hacking again ... missing a getResultsTable() method in TextWindow
                    final ResultsTable rt = (ResultsTable) Utils.getField(tw.getTextPanel(), "rt");
                    // assumes columns will be identical
                    if (null != rt)
                        return rt;
                }
                // else create a new one
                final ResultsTable rt = new ResultsTable();
                rt.setPrecision(2);
                for (int i = 0; i < columns.length; i++) rt.setHeading(i, columns[i]);
                // 
                return rt;
            }
        }).get();
    } catch (final Throwable t) {
        IJError.print(t);
        return null;
    }
}

Example 18 with ResultsTable

use of ij.measure.ResultsTable in project mcib3d-core by mcib3d.

the class Association method getAssociationTable.

@Deprecated
public ResultsTable getAssociationTable() {
    ResultsTable rt = ResultsTable.getResultsTable();
    if (rt == null)
        rt = new ResultsTable();
    // normal asso
    int row = rt.getCounter();
    for (String s : CostsOK.keySet()) {
        Object3D object3D1 = getObject3D1fromAsso(s);
        Object3D object3D2 = getObject3D2fromAsso(s);
        rt.setValue("Label1", row, object3D1.getValue());
        rt.setValue("Label2", row, object3D2.getValue());
        rt.setValue("CostAsso", row, CostsOK.get(s));
        row++;
    }
    // orphan1
    row = rt.getCounter();
    for (String s : getOrphan1()) {
        rt.setValue("Label1", row, s);
        rt.setValue("Label2", row, 0);
        rt.setValue("CostAsso", row, 0);
        row++;
    }
    // orphan2
    row = rt.getCounter();
    for (String s : getOrphan2()) {
        rt.setValue("Label1", row, 0);
        rt.setValue("Label2", row, s);
        rt.setValue("CostAsso", row, 0);
        row++;
    }
    return rt;
}

Example 19 with ResultsTable

use of ij.measure.ResultsTable in project mcib3d-core by mcib3d.

the class TrackingAssociation method getResultsTableAssociation.

public ResultsTable getResultsTableAssociation() {
    if (finalAssociations == null)
        computeTracking();
    // create results table
    ResultsTable table = new ResultsTable();
    // list associations
    int row = table.getCounter();
    for (AssociationPair pair : finalAssociations) {
        int val1 = pair.getObject3D1().getValue();
        int val2 = pair.getObject3D2().getValue();
        double cost = pair.getAsso();
        // table
        table.setValue("Label1", row, val1);
        table.setValue("Label2", row, val2);
        table.setValue("Cost", row, cost);
        row++;
    }
    // orphan1
    row = table.getCounter();
    for (Object3D object3D : finalOrphan1) {
        table.setValue("Label1", row, object3D.getValue());
        table.setValue("Label2", row, 0);
        table.setValue("CostAsso", row, 0);
        row++;
    }
    // orphan2
    row = table.getCounter();
    for (Object3D object3D : finalOrphan2) {
        table.setValue("Label1", row, 0);
        table.setValue("Label2", row, object3D.getValue());
        table.setValue("CostAsso", row, 0);
        row++;
    }
    return table;
}

Example 20 with ResultsTable

use of ij.measure.ResultsTable in project mcib3d-core by mcib3d.

the class TrackingAssociation method getResultsTableMitosis.

public ResultsTable getResultsTableMitosis() {
    if (finalAssociations == null)
        computeTracking();
    // create results table
    ResultsTable table = new ResultsTable();
    // list associations
    int row = table.getCounter();
    for (Mitosis mitosis : finalMitosis) {
        // table
        table.setValue("Mother", row, mitosis.getMother().getValue());
        table.setValue("Daughter1", row, mitosis.getDaughter1().getValue());
        table.setValue("Daughter2", row, mitosis.getDaughter2().getValue());
        table.setValue("Colocalisation", row, mitosis.getColocMitosis());
        row++;
    }
    return table;
}