use of javax.swing.GroupLayout.DEFAULT_SIZE in project EnrichmentMapApp by BaderLab.
the class HeatMapMainPanel method createToolbarPanel.
private JPanel createToolbarPanel() {
gradientLegendPanel = new GradientLegendPanel(table);
showValuesCheck = new JCheckBox("Show Values");
JLabel operatorLabel = new JLabel("Genes:");
operatorCombo = new JComboBox<>();
JLabel normLabel = new JLabel("Expressions:");
normCombo = new JComboBox<>();
SwingUtil.makeSmall(operatorLabel, operatorCombo, normLabel, normCombo, showValuesCheck);
operatorCombo.addItem(new ComboItem<>(Operator.UNION, "Union"));
operatorCombo.addItem(new ComboItem<>(Operator.INTERSECTION, "Intersection"));
operatorCombo.setSelectedItem(ComboItem.of(Operator.UNION));
normCombo.addItem(new ComboItem<>(Transform.AS_IS, "Expression Values"));
normCombo.addItem(new ComboItem<>(Transform.ROW_NORMALIZE, "Row Normalize"));
normCombo.addItem(new ComboItem<>(Transform.LOG_TRANSFORM, "Log Transform"));
normCombo.addItem(new ComboItem<>(Transform.COMPRESS_MEDIAN, "Compress (Median)"));
normCombo.addItem(new ComboItem<>(Transform.COMPRESS_MIN, "Compress (Min)"));
normCombo.addItem(new ComboItem<>(Transform.COMPRESS_MAX, "Compress (Max)"));
normCombo.setSelectedItem(ComboItem.of(Transform.COMPRESS_MEDIAN));
operatorCombo.addActionListener(operatorActionListener = e -> updateSetting_Operator(getOperator()));
normCombo.addActionListener(normActionListener = e -> updateSetting_Transform(getTransform()));
showValuesCheck.addActionListener(showValueActionListener = e -> updateSetting_ShowValues(isShowValues()));
JButton plusButton = SwingUtil.createIconButton(iconManager, IconManager.ICON_PLUS, "Add Rankings...");
JButton gearButton = SwingUtil.createIconButton(iconManager, IconManager.ICON_GEAR, "Settings");
JButton menuButton = SwingUtil.createIconButton(iconManager, IconManager.ICON_EXTERNAL_LINK, "Export");
LookAndFeelUtil.equalizeSize(gearButton, menuButton);
plusButton.addActionListener(e -> addRankings());
gearButton.addActionListener(e -> settingsPanel.popup(gearButton));
menuButton.addActionListener(this::showExportMenu);
JPanel panel = new JPanel();
GroupLayout layout = new GroupLayout(panel);
panel.setLayout(layout);
layout.setAutoCreateContainerGaps(false);
layout.setAutoCreateGaps(!LookAndFeelUtil.isAquaLAF());
layout.setHorizontalGroup(layout.createSequentialGroup().addComponent(gradientLegendPanel, 180, 180, 180).addGap(0, 0, Short.MAX_VALUE).addComponent(operatorLabel).addComponent(operatorCombo, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addGap(5).addComponent(normLabel).addComponent(normCombo, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addGap(5).addComponent(showValuesCheck).addGap(5).addComponent(plusButton).addComponent(gearButton).addComponent(menuButton));
layout.setVerticalGroup(layout.createParallelGroup(Alignment.BASELINE).addComponent(gradientLegendPanel).addComponent(operatorLabel).addComponent(operatorCombo).addComponent(normLabel).addComponent(normCombo).addComponent(showValuesCheck).addComponent(plusButton).addComponent(gearButton).addComponent(menuButton));
panel.setOpaque(false);
return panel;
}
use of javax.swing.GroupLayout.DEFAULT_SIZE in project EnrichmentMapApp by BaderLab.
the class PostAnalysisWeightPanel method createHypergeomPanel.
private JPanel createHypergeomPanel() {
ActionListener universeSelectActionListener = e -> {
boolean enable = e.getActionCommand().equals("User Defined");
universeSelectionTextField.setEnabled(enable);
};
gmtRadioButton = new JRadioButton();
gmtRadioButton.setActionCommand("GMT");
gmtRadioButton.addActionListener(universeSelectActionListener);
gmtRadioButton.setSelected(true);
expressionSetRadioButton = new JRadioButton();
expressionSetRadioButton.setActionCommand("Expression Set");
expressionSetRadioButton.addActionListener(universeSelectActionListener);
intersectionRadioButton = new JRadioButton();
intersectionRadioButton.setActionCommand("Intersection");
intersectionRadioButton.addActionListener(universeSelectActionListener);
userDefinedRadioButton = new JRadioButton("User Defined:");
userDefinedRadioButton.setActionCommand("User Defined");
userDefinedRadioButton.addActionListener(universeSelectActionListener);
ButtonGroup buttonGroup = new ButtonGroup();
buttonGroup.add(gmtRadioButton);
buttonGroup.add(expressionSetRadioButton);
buttonGroup.add(intersectionRadioButton);
buttonGroup.add(userDefinedRadioButton);
DecimalFormat intFormat = new DecimalFormat();
intFormat.setParseIntegerOnly(true);
universeSelectionTextField = new JFormattedTextField(intFormat);
universeSelectionTextField.addPropertyChangeListener("value", e -> {
Number val = (Number) universeSelectionTextField.getValue();
if (val == null || val.intValue() < 0) {
universeSelectionTextField.setValue(1);
CySwingApplication application = serviceRegistrar.getService(CySwingApplication.class);
JOptionPane.showMessageDialog(application.getJFrame(), "Universe value must be greater than zero", "Parameter out of bounds", JOptionPane.WARNING_MESSAGE);
}
});
universeSelectionTextField.setEnabled(false);
gmtRadioButton.setText("GMT");
expressionSetRadioButton.setText("Expression Set");
intersectionRadioButton.setText("Intersection");
universeSelectionTextField.setValue(0);
makeSmall(gmtRadioButton, expressionSetRadioButton, intersectionRadioButton, userDefinedRadioButton, universeSelectionTextField);
JPanel panel = new JPanel();
panel.setBorder(LookAndFeelUtil.createTitledBorder("Advanced Hypergeometric Universe"));
final GroupLayout layout = new GroupLayout(panel);
panel.setLayout(layout);
layout.setAutoCreateContainerGaps(true);
layout.setAutoCreateGaps(!LookAndFeelUtil.isAquaLAF());
layout.setHorizontalGroup(layout.createParallelGroup(Alignment.LEADING, true).addComponent(gmtRadioButton).addComponent(expressionSetRadioButton).addComponent(intersectionRadioButton).addGroup(layout.createSequentialGroup().addComponent(userDefinedRadioButton, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addPreferredGap(ComponentPlacement.RELATED).addComponent(universeSelectionTextField, DEFAULT_SIZE, DEFAULT_SIZE, Short.MAX_VALUE)));
layout.setVerticalGroup(layout.createSequentialGroup().addComponent(gmtRadioButton, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addComponent(expressionSetRadioButton, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addComponent(intersectionRadioButton, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addGroup(layout.createParallelGroup(Alignment.CENTER, false).addComponent(userDefinedRadioButton, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE).addComponent(universeSelectionTextField, PREFERRED_SIZE, DEFAULT_SIZE, PREFERRED_SIZE)));
if (LookAndFeelUtil.isAquaLAF())
panel.setOpaque(false);
return panel;
}
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