Examples with ByteType net.imglib2.type.numeric.integer.ByteType used on opensource projects

Example 71 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class OpeningTest method testListOpen.

@Test
public void testListOpen() {
    final List<Shape> shapes = new ArrayList<>();
    shapes.add(new DiamondShape(1));
    shapes.add(new DiamondShape(1));
    shapes.add(new RectangleShape(1, false));
    shapes.add(new HorizontalLineShape(2, 1, false));
    @SuppressWarnings("unchecked") final IterableInterval<ByteType> out1 = (IterableInterval<ByteType>) ops.run(ListOpen.class, IterableInterval.class, in, shapes);
    final Img<ByteType> out2 = Opening.open(in, shapes, 1);
    assertIterationsEqual(out2, out1);
}

Example 72 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class TopHatTest method testListTopHat.

@Test
public void testListTopHat() {
    final List<Shape> shapes = new ArrayList<>();
    shapes.add(new DiamondShape(1));
    shapes.add(new DiamondShape(1));
    shapes.add(new RectangleShape(1, false));
    shapes.add(new HorizontalLineShape(2, 1, false));
    @SuppressWarnings("unchecked") final IterableInterval<ByteType> out1 = (IterableInterval<ByteType>) ops.run(ListTopHat.class, IterableInterval.class, in, shapes);
    final Img<ByteType> out2 = TopHat.topHat(in, shapes, 1);
    assertIterationsEqual(out2, out1);
}

Example 73 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class SliceTest method testNonZeroMinimumInterval.

@Test
public void testNonZeroMinimumInterval() {
    Img<ByteType> img3D = ArrayImgs.bytes(50, 50, 3);
    IntervalView<ByteType> interval2D = Views.interval(img3D, new FinalInterval(new long[] { 25, 25, 2 }, new long[] { 35, 35, 2 }));
    final int[] xyAxis = new int[] { 0, 1 };
    // iterate through every slice, should return a single
    // RandomAccessibleInterval<?> from 25, 25, 2 to 35, 35, 2
    final SlicesII<ByteType> hyperSlices = new SlicesII<>(interval2D, xyAxis, true);
    final Cursor<RandomAccessibleInterval<ByteType>> c = hyperSlices.cursor();
    int i = 0;
    while (c.hasNext()) {
        c.next();
        i++;
    }
    assertEquals(1, i);
}

Example 74 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class SliceTest method setUp.

@Override
@Before
public void setUp() {
    context = new Context(OpService.class);
    ops = context.service(OpService.class);
    in = ArrayImgs.bytes(20, 20, 21);
    out = ArrayImgs.bytes(20, 20, 21);
    for (final Cursor<ByteType> cur = in.cursor(); cur.hasNext(); ) {
        cur.fwd();
        cur.get().set((byte) cur.getIntPosition(2));
    }
}

Example 75 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class JoinTest method testJoinComputerAndInplace.

@Test
public void testJoinComputerAndInplace() {
    final Op op = ops.op(DefaultJoinComputerAndInplace.class, out, in, computerOp, inplaceOp);
    op.run();
    // test
    final Cursor<ByteType> c = out.cursor();
    while (c.hasNext()) {
        assertEquals(2, c.next().get());
    }
}