Examples with ItemBean org.akaza.openclinica.bean.submit.ItemBean used on opensource projects

Example 36 with ItemBean

use of org.akaza.openclinica.bean.submit.ItemBean in project OpenClinica by OpenClinica.

the class PrintDataEntryServlet method validateDisplayItemBean.

/*
     * (non-Javadoc)
     *
     * @see org.akaza.openclinica.control.submit.DataEntryServlet#validateDisplayItemBean(org.akaza.openclinica.core.form.Validator,
     *      org.akaza.openclinica.bean.submit.DisplayItemBean)
     */
@Override
protected DisplayItemBean validateDisplayItemBean(DiscrepancyValidator v, DisplayItemBean dib, String inputName, HttpServletRequest request) {
    ItemBean ib = dib.getItem();
    org.akaza.openclinica.bean.core.ResponseType rt = dib.getMetadata().getResponseSet().getResponseType();
    // note that this step sets us up both for
    // displaying the data on the form again, in the event of an error
    // and sending the data to the database, in the event of no error
    dib = loadFormValue(dib, request);
    // types TEL and ED are not supported yet
    if (rt.equals(org.akaza.openclinica.bean.core.ResponseType.TEXT) || rt.equals(org.akaza.openclinica.bean.core.ResponseType.TEXTAREA)) {
        dib = validateDisplayItemBeanText(v, dib, inputName, request);
    } else if (rt.equals(org.akaza.openclinica.bean.core.ResponseType.RADIO) || rt.equals(org.akaza.openclinica.bean.core.ResponseType.SELECT)) {
        dib = validateDisplayItemBeanSingleCV(v, dib, inputName);
    } else if (rt.equals(org.akaza.openclinica.bean.core.ResponseType.CHECKBOX) || rt.equals(org.akaza.openclinica.bean.core.ResponseType.SELECTMULTI)) {
        dib = validateDisplayItemBeanMultipleCV(v, dib, inputName);
    } else if (rt.equals(org.akaza.openclinica.bean.core.ResponseType.CALCULATION) || rt.equals(org.akaza.openclinica.bean.core.ResponseType.GROUP_CALCULATION)) {
        // for now, treat calculation like any other text input --
        // eventually this might need to be customized
        dib = validateDisplayItemBeanText(v, dib, inputName, request);
    }
    return dib;
}

Example 37 with ItemBean

use of org.akaza.openclinica.bean.submit.ItemBean in project OpenClinica by OpenClinica.

the class ViewEventCRFServlet method processRequest.

@Override
public void processRequest() throws Exception {
    FormProcessor fp = new FormProcessor(request);
    int eventCRFId = fp.getInt("id", true);
    int studySubId = fp.getInt("studySubId", true);
    StudySubjectDAO subdao = new StudySubjectDAO(sm.getDataSource());
    EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
    ItemDataDAO iddao = new ItemDataDAO(sm.getDataSource());
    ItemDAO idao = new ItemDAO(sm.getDataSource());
    ItemFormMetadataDAO ifmdao = new ItemFormMetadataDAO(sm.getDataSource());
    CRFDAO cdao = new CRFDAO(sm.getDataSource());
    SectionDAO secdao = new SectionDAO(sm.getDataSource());
    if (eventCRFId == 0) {
        addPageMessage(respage.getString("please_choose_an_event_CRF_to_view"));
        forwardPage(Page.LIST_STUDY_SUBJECTS);
    } else {
        StudySubjectBean studySub = (StudySubjectBean) subdao.findByPK(studySubId);
        request.setAttribute("studySub", studySub);
        EventCRFBean eventCRF = (EventCRFBean) ecdao.findByPK(eventCRFId);
        CRFBean crf = cdao.findByVersionId(eventCRF.getCRFVersionId());
        request.setAttribute("crf", crf);
        ArrayList sections = secdao.findAllByCRFVersionId(eventCRF.getCRFVersionId());
        for (int j = 0; j < sections.size(); j++) {
            SectionBean section = (SectionBean) sections.get(j);
            ArrayList itemData = iddao.findAllByEventCRFId(eventCRFId);
            ArrayList displayItemData = new ArrayList();
            for (int i = 0; i < itemData.size(); i++) {
                ItemDataBean id = (ItemDataBean) itemData.get(i);
                DisplayItemBean dib = new DisplayItemBean();
                ItemBean item = (ItemBean) idao.findByPK(id.getItemId());
                ItemFormMetadataBean ifm = ifmdao.findByItemIdAndCRFVersionId(item.getId(), eventCRF.getCRFVersionId());
                item.setItemMeta(ifm);
                dib.setItem(item);
                dib.setData(id);
                dib.setMetadata(ifm);
                displayItemData.add(dib);
            }
            section.setItems(displayItemData);
        }
        request.setAttribute("sections", sections);
        request.setAttribute("studySubId", new Integer(studySubId).toString());
        forwardPage(Page.VIEW_EVENT_CRF);
    }
}

Example 38 with ItemBean

use of org.akaza.openclinica.bean.submit.ItemBean in project OpenClinica by OpenClinica.

the class DataEntryServlet method getParentDisplayItems.

/**
     * For each single item in this section which is a parent, get a DisplayItemBean corresponding to that item. Note that an item is a parent iff its parentId
     * == 0.
     * @param sb
     *            The section whose items we are retrieving.
     * @param hasUngroupedItems
     * @param request TODO
     *
     * @return An array of DisplayItemBean objects, one per parent item in the section. Note that there is no guarantee on the ordering of the objects.
     * @throws Exception
     */
private ArrayList getParentDisplayItems(boolean hasGroup, SectionBean sb, EventDefinitionCRFBean edcb, ItemDAO idao, ItemFormMetadataDAO ifmdao, ItemDataDAO iddao, boolean hasUngroupedItems, HttpServletRequest request) throws Exception {
    ArrayList answer = new ArrayList();
    EventCRFBean ecb = (EventCRFBean) request.getAttribute(INPUT_EVENT_CRF);
    HashMap displayItems = new HashMap();
    // ArrayList items = idao.findAllParentsBySectionId(sb.getId());
    ArrayList items = new ArrayList();
    ArrayList itemsUngrped = new ArrayList();
    if (hasGroup) {
        // See: FormBeanUtil.sectionHasUngroupedItems.
        if (hasUngroupedItems) {
            // @pgawade 05-Aug-2011 fix for issue 10628 - commented out the
            // if-else logic based on 'hasGroup' flag.
            // 'if' part is unchanged but else part is changed to be
            // executed always because that is to get the non-repeating and
            // ungrouped item details and was getting skipped in case the
            // section has repeating group items plus non-repeating group
            // items
            itemsUngrped = idao.findAllUngroupedParentsBySectionId(sb.getId(), sb.getCRFVersionId());
        }
    // however, if we have true:true, we exclude all grouped items
    // items.addAll(
    // idao.findAllGroupedParentsBySectionId(
    // sb.getId(), sb.getCRFVersionId()));
    }
    // else {
    LOGGER.trace("no item groups");
    // items = idao.findAllParentsBySectionId(sb.getId());
    items = idao.findAllNonRepeatingParentsBySectionId(sb.getId());
    items.addAll(itemsUngrped);
    // }
    LOGGER.debug("items size" + items.size());
    for (int i = 0; i < items.size(); i++) {
        DisplayItemBean dib = new DisplayItemBean();
        dib.setEventDefinitionCRF(edcb);
        ItemBean ib = (ItemBean) items.get(i);
        dib.setItem(ib);
        displayItems.put(new Integer(dib.getItem().getId()), dib);
    }
    ArrayList data = iddao.findAllBySectionIdAndEventCRFId(sb.getId(), ecb.getId());
    for (int i = 0; i < data.size(); i++) {
        ItemDataBean idb = (ItemDataBean) data.get(i);
        DisplayItemBean dib = (DisplayItemBean) displayItems.get(new Integer(idb.getItemId()));
        if (dib != null) {
            dib.setData(idb);
            dib.setDbData((ItemDataBean) BeanUtils.cloneBean(idb));
            displayItems.put(new Integer(idb.getItemId()), dib);
        }
    }
    ArrayList metadata = ifmdao.findAllBySectionId(sb.getId());
    for (int i = 0; i < metadata.size(); i++) {
        ItemFormMetadataBean ifmb = (ItemFormMetadataBean) metadata.get(i);
        DisplayItemBean dib = (DisplayItemBean) displayItems.get(new Integer(ifmb.getItemId()));
        if (dib != null) {
            // boolean showItem = false;
            boolean needsHighlighting = !ifmb.isShowItem();
            logMe("Entering thread before getting ItemMetadataService:::" + Thread.currentThread());
            boolean showItem = getItemMetadataService().isShown(ifmb.getItemId(), ecb, dib.getData());
            if (getServletPage(request).equals(Page.DOUBLE_DATA_ENTRY_SERVLET)) {
                showItem = getItemMetadataService().hasPassedDDE(ifmb, ecb, dib.getData());
            }
            // is the above needed for children items too?
            boolean passedDDE = getItemMetadataService().hasPassedDDE(ifmb, ecb, dib.getData());
            if (showItem) {
                // we are only showing, not hiding
                LOGGER.debug("set show item " + ifmb.getItemId() + " idb " + dib.getData().getId() + " show item " + showItem + " passed dde " + passedDDE);
                // ifmb.setShowItem(showItem);
                ifmb.setShowItem(true);
            } else {
                LOGGER.debug("DID NOT set show item " + ifmb.getItemId() + " idb " + dib.getData().getId() + " show item " + showItem + " passed dde " + passedDDE + " value " + dib.getData().getValue());
            }
            dib.setMetadata(ifmb);
            displayItems.put(new Integer(ifmb.getItemId()), dib);
        }
    }
    Iterator hmIt = displayItems.keySet().iterator();
    while (hmIt.hasNext()) {
        Integer key = (Integer) hmIt.next();
        DisplayItemBean dib = (DisplayItemBean) displayItems.get(key);
        answer.add(dib);
        LOGGER.debug("*** getting with key: " + key + " display item bean with value: " + dib.getData().getValue());
    }
    LOGGER.debug("*** test of the display items: " + displayItems.toString());
    return answer;
}

Example 39 with ItemBean

use of org.akaza.openclinica.bean.submit.ItemBean in project OpenClinica by OpenClinica.

the class DataEntryServlet method loadItemsWithGroupRows.

protected void loadItemsWithGroupRows(DisplayItemWithGroupBean itemWithGroup, SectionBean sb, EventDefinitionCRFBean edcb, EventCRFBean ecb, HttpServletRequest request) {
    //this method is a copy of the method: createItemWithGroups ,
    //only modified for load one DisplayItemWithGroupBean.
    //
    ItemDAO idao = new ItemDAO(getDataSource());
    // For adding null values to display items
    FormBeanUtil formBeanUtil = new FormBeanUtil();
    List<String> nullValuesList = new ArrayList<String>();
    // BWP>> Get a List<String> of any null values such as NA or NI
    // method returns null values as a List<String>
    nullValuesList = formBeanUtil.getNullValuesByEventCRFDefId(edcb.getId(), getDataSource());
    // >>BWP
    ItemDataDAO iddao = new ItemDataDAO(getDataSource(), locale);
    ArrayList data = iddao.findAllActiveBySectionIdAndEventCRFId(sb.getId(), ecb.getId());
    DisplayItemGroupBean itemGroup = itemWithGroup.getItemGroup();
    // to arrange item groups and other single items, the ordinal of
    // a item group will be the ordinal of the first item in this
    // group
    DisplayItemBean firstItem = itemGroup.getItems().get(0);
    DisplayItemBean checkItem = firstItem;
    // does not work if there is not any data in the first item of the group
    // i.e. imports.
    // does it make a difference if we take a last item?
    boolean noNeedToSwitch = false;
    for (int i = 0; i < data.size(); i++) {
        ItemDataBean idb = (ItemDataBean) data.get(i);
        if (idb.getItemId() == firstItem.getItem().getId()) {
            noNeedToSwitch = true;
        }
    }
    if (!noNeedToSwitch) {
        checkItem = itemGroup.getItems().get(itemGroup.getItems().size() - 1);
    }
    // so we are either checking the first or the last item, BUT ONLY ONCE
    itemWithGroup.setPageNumberLabel(firstItem.getMetadata().getPageNumberLabel());
    itemWithGroup.setItemGroup(itemGroup);
    itemWithGroup.setInGroup(true);
    itemWithGroup.setOrdinal(itemGroup.getGroupMetaBean().getOrdinal());
    List<ItemBean> itBeans = idao.findAllItemsByGroupId(itemGroup.getItemGroupBean().getId(), sb.getCRFVersionId());
    boolean hasData = false;
    int checkAllColumns = 0;
    // first item should be same as the row number
    for (int i = 0; i < data.size(); i++) {
        ItemDataBean idb = (ItemDataBean) data.get(i);
        LOGGER.debug("check all columns: " + checkAllColumns);
        if (idb.getItemId() == checkItem.getItem().getId()) {
            hasData = true;
            LOGGER.debug("set has data to --TRUE--");
            checkAllColumns = 0;
            // so that we only fire once a row
            LOGGER.debug("has data set to true");
            DisplayItemGroupBean digb = new DisplayItemGroupBean();
            // always get a fresh copy for items, may use other
            // better way to
            // do deep copy, like clone
            List<DisplayItemBean> dibs = FormBeanUtil.getDisplayBeansFromItems(itBeans, getDataSource(), ecb, sb.getId(), edcb, 0, getServletContext());
            digb.setItems(dibs);
            LOGGER.trace("set with dibs list of : " + dibs.size());
            digb.setGroupMetaBean(runDynamicsCheck(itemGroup.getGroupMetaBean(), request));
            digb.setItemGroupBean(itemGroup.getItemGroupBean());
            itemWithGroup.getItemGroups().add(digb);
            itemWithGroup.getDbItemGroups().add(digb);
        }
    }
    List<DisplayItemGroupBean> groupRows = itemWithGroup.getItemGroups();
    LOGGER.trace("how many group rows:" + groupRows.size());
    LOGGER.trace("how big is the data:" + data.size());
    if (hasData) {
        // the group
        for (int i = 0; i < groupRows.size(); i++) {
            DisplayItemGroupBean displayGroup = groupRows.get(i);
            for (DisplayItemBean dib : displayGroup.getItems()) {
                for (int j = 0; j < data.size(); j++) {
                    ItemDataBean idb = (ItemDataBean) data.get(j);
                    if (idb.getItemId() == dib.getItem().getId() && !idb.isSelected()) {
                        idb.setSelected(true);
                        dib.setData(idb);
                        LOGGER.debug("--> set data " + idb.getId() + ": " + idb.getValue());
                        if (shouldLoadDBValues(dib)) {
                            LOGGER.debug("+++should load db values is true, set value");
                            dib.loadDBValue();
                            LOGGER.debug("+++data loaded: " + idb.getName() + ": " + idb.getOrdinal() + " " + idb.getValue());
                            LOGGER.debug("+++try dib OID: " + dib.getItem().getOid());
                        }
                        break;
                    }
                }
            }
        }
    } else {
        // no data, still add a blank row for displaying
        DisplayItemGroupBean digb2 = new DisplayItemGroupBean();
        List<DisplayItemBean> dibs = FormBeanUtil.getDisplayBeansFromItems(itBeans, getDataSource(), ecb, sb.getId(), nullValuesList, getServletContext());
        digb2.setItems(dibs);
        LOGGER.trace("set with nullValuesList of : " + nullValuesList);
        digb2.setEditFlag("initial");
        digb2.setGroupMetaBean(itemGroup.getGroupMetaBean());
        digb2.setItemGroupBean(itemGroup.getItemGroupBean());
        itemWithGroup.getItemGroups().add(digb2);
        itemWithGroup.getDbItemGroups().add(digb2);
    }
}

Example 40 with ItemBean

use of org.akaza.openclinica.bean.submit.ItemBean in project OpenClinica by OpenClinica.

the class DataEntryServlet method createItemWithGroups.

//@pgawade 30-May-2012 Fix for issue 13963 - added an extra parameter 'isSubmitted' to method createItemWithGroups
protected List<DisplayItemWithGroupBean> createItemWithGroups(DisplaySectionBean dsb, boolean hasItemGroup, int eventCRFDefId, HttpServletRequest request, boolean isSubmitted) {
    HttpSession session = request.getSession();
    List<DisplayItemWithGroupBean> displayItemWithGroups = new ArrayList<DisplayItemWithGroupBean>();
    EventCRFBean ecb = (EventCRFBean) request.getAttribute(INPUT_EVENT_CRF);
    ItemDAO idao = new ItemDAO(getDataSource());
    SectionBean sb = (SectionBean) request.getAttribute(SECTION_BEAN);
    EventDefinitionCRFBean edcb = (EventDefinitionCRFBean) request.getAttribute(EVENT_DEF_CRF_BEAN);
    // BWP>> Get a List<String> of any null values such as NA or NI
    // method returns null values as a List<String>
    // >>BWP
    ArrayList items = dsb.getItems();
    // For adding null values to display items
    FormBeanUtil formBeanUtil = new FormBeanUtil();
    List<String> nullValuesList = formBeanUtil.getNullValuesByEventCRFDefId(eventCRFDefId, getDataSource());
    LOGGER.trace("single items size: " + items.size());
    for (int i = 0; i < items.size(); i++) {
        DisplayItemBean item = (DisplayItemBean) items.get(i);
        DisplayItemWithGroupBean newOne = new DisplayItemWithGroupBean();
        newOne.setSingleItem(runDynamicsItemCheck(item, null, request));
        newOne.setOrdinal(item.getMetadata().getOrdinal());
        newOne.setInGroup(false);
        newOne.setPageNumberLabel(item.getMetadata().getPageNumberLabel());
        displayItemWithGroups.add(newOne);
    // logger.trace("just added on line 1979:
    // "+newOne.getSingleItem().getData().getValue());
    }
    if (hasItemGroup) {
        ItemDataDAO iddao = new ItemDataDAO(getDataSource(), locale);
        ArrayList<ItemDataBean> data = iddao.findAllBySectionIdAndEventCRFId(sb.getId(), ecb.getId());
        HashMap<String, ItemDataBean> dataMap = (HashMap<String, ItemDataBean>) getAllActive(data);
        if (data != null && data.size() > 0) {
            session.setAttribute(HAS_DATA_FLAG, true);
        }
        LOGGER.trace("found data: " + data.size());
        LOGGER.trace("data.toString: " + data.toString());
        for (DisplayItemGroupBean itemGroup : dsb.getDisplayFormGroups()) {
            LOGGER.debug("found one itemGroup");
            DisplayItemWithGroupBean newOne = new DisplayItemWithGroupBean();
            // to arrange item groups and other single items, the ordinal of
            // a item group will be the ordinal of the first item in this
            // group
            DisplayItemBean firstItem = itemGroup.getItems().get(0);
            // so we are either checking the first or the last item, BUT ONLY ONCE
            newOne.setPageNumberLabel(firstItem.getMetadata().getPageNumberLabel());
            newOne.setItemGroup(itemGroup);
            newOne.setInGroup(true);
            newOne.setOrdinal(itemGroup.getGroupMetaBean().getOrdinal());
            List<ItemBean> itBeans = idao.findAllItemsByGroupIdOrdered(itemGroup.getItemGroupBean().getId(), sb.getCRFVersionId());
            List<DisplayItemBean> dibs = new ArrayList();
            boolean hasData = false;
            int checkAllColumns = 0;
            if (data.size() > 0)
                hasData = true;
            //@pgawade 30-May-2012 Fix for issue 13963 - added an extra parameter 'isSubmitted' to method buildMatrixForRepeatingGroups
            newOne = buildMatrixForRepeatingGroups(newOne, itemGroup, ecb, sb, itBeans, dataMap, nullValuesList, isSubmitted);
            if (hasData) {
                //TODO: fix the group_has_data flag on bean not on session
                session.setAttribute(GROUP_HAS_DATA, Boolean.TRUE);
            } else {
                session.setAttribute(GROUP_HAS_DATA, Boolean.FALSE);
                // no data, still add a blank row for displaying
                if (nullValuesList != null && nullValuesList.size() > 0) {
                    LOGGER.trace("set with nullValuesList of : " + nullValuesList);
                }
                dibs = FormBeanUtil.getDisplayBeansFromItems(itBeans, getDataSource(), ecb, sb.getId(), nullValuesList, getServletContext());
                DisplayItemGroupBean digb2 = new DisplayItemGroupBean();
                digb2.setItems(dibs);
                digb2.setEditFlag("initial");
            }
            displayItemWithGroups.add(newOne);
        }
    }
    // if hasItemGroup
    Collections.sort(displayItemWithGroups);
    return displayItemWithGroups;
}