use of org.apache.sysml.api.DMLScript.RUNTIME_PLATFORM in project incubator-systemml by apache.
the class OptimizerUtils method getDefaultExecutionMode.
public static RUNTIME_PLATFORM getDefaultExecutionMode() {
//default execution type is hybrid (cp+mr)
RUNTIME_PLATFORM ret = RUNTIME_PLATFORM.HYBRID;
//switch default to hybrid_spark (cp+spark) if in spark driver
String sparkenv = System.getenv().get("SPARK_ENV_LOADED");
if (sparkenv != null && sparkenv.equals("1"))
ret = RUNTIME_PLATFORM.HYBRID_SPARK;
return ret;
}
use of org.apache.sysml.api.DMLScript.RUNTIME_PLATFORM in project incubator-systemml by apache.
the class FullGroupedAggregateMatrixTest method runGroupedAggregateOperationTest.
/**
*
* @param testname
* @param type
* @param sparse
* @param instType
*/
@SuppressWarnings("rawtypes")
private void runGroupedAggregateOperationTest(String testname, OpType type, boolean sparse, ExecType instType, int numCols) {
//rtplatform for MR
RUNTIME_PLATFORM platformOld = rtplatform;
switch(instType) {
case MR:
rtplatform = RUNTIME_PLATFORM.HADOOP;
break;
case SPARK:
rtplatform = RUNTIME_PLATFORM.SPARK;
break;
default:
rtplatform = RUNTIME_PLATFORM.HYBRID;
break;
}
boolean sparkConfigOld = DMLScript.USE_LOCAL_SPARK_CONFIG;
if (rtplatform == RUNTIME_PLATFORM.SPARK)
DMLScript.USE_LOCAL_SPARK_CONFIG = true;
try {
//determine script and function name
String TEST_NAME = testname;
int fn = type.ordinal();
double sparsity = (sparse) ? sparsity1 : sparsity2;
String TEST_CACHE_DIR = TEST_CACHE_ENABLED ? TEST_NAME + type.ordinal() + "_" + sparsity + "_" + numCols + "/" : "";
boolean exceptionExpected = !TEST_NAME.equals(TEST_NAME1);
TestConfiguration config = getTestConfiguration(TEST_NAME);
loadTestConfiguration(config, TEST_CACHE_DIR);
// This is for running the junit test the new way, i.e., construct the arguments directly
String HOME = SCRIPT_DIR + TEST_DIR;
fullDMLScriptName = HOME + TEST_NAME + ".dml";
programArgs = new String[] { "-explain", "-args", input("A"), input("B"), String.valueOf(fn), String.valueOf(numGroups), output("C") };
fullRScriptName = HOME + TEST_NAME + ".R";
rCmd = "Rscript" + " " + fullRScriptName + " " + inputDir() + " " + fn + " " + expectedDir();
//generate actual dataset
double[][] A = getRandomMatrix(rows, numCols, -0.05, 1, sparsity, 7);
writeInputMatrix("A", A, true);
MatrixCharacteristics mc1 = new MatrixCharacteristics(rows, numCols, 1000, 1000);
MapReduceTool.writeMetaDataFile(input("A.mtd"), ValueType.DOUBLE, mc1, OutputInfo.TextCellOutputInfo);
double[][] B = TestUtils.round(getRandomMatrix(rows, 1, 1, numGroups, 1.0, 3));
writeInputMatrix("B", B, true);
MatrixCharacteristics mc2 = new MatrixCharacteristics(rows, 1, 1000, 1000);
MapReduceTool.writeMetaDataFile(input("B.mtd"), ValueType.DOUBLE, mc2, OutputInfo.TextCellOutputInfo);
//run tests
Class cla = (exceptionExpected ? DMLException.class : null);
runTest(true, exceptionExpected, cla, -1);
//compare matrices
if (!exceptionExpected) {
//run R script for comparison
runRScript(true);
//compare output matrices
HashMap<CellIndex, Double> dmlfile = readDMLMatrixFromHDFS("C");
HashMap<CellIndex, Double> rfile = readRMatrixFromFS("C");
TestUtils.compareMatrices(dmlfile, rfile, eps, "Stat-DML", "Stat-R");
//check dml output meta data
checkDMLMetaDataFile("C", new MatrixCharacteristics(numGroups, numCols, 1, 1));
}
} catch (IOException ex) {
ex.printStackTrace();
throw new RuntimeException(ex);
} finally {
rtplatform = platformOld;
DMLScript.USE_LOCAL_SPARK_CONFIG = sparkConfigOld;
}
}
use of org.apache.sysml.api.DMLScript.RUNTIME_PLATFORM in project incubator-systemml by apache.
the class FullGroupedAggregateTest method runGroupedAggregateOperationTest.
/* TODO weighted central moment in R
@Test
public void testGroupedAggMoment4DenseWeightsMR()
{
runGroupedAggregateOperationTest(OpType.MOMENT4, false, true, false, ExecType.MR);
}
@Test
public void testGroupedAggMoment4SparseWeightsMR()
{
runGroupedAggregateOperationTest(OpType.MOMENT4, true, true, false, ExecType.MR);
}
*/
/**
*
* @param sparseM1
* @param sparseM2
* @param instType
* @throws IOException
*/
private void runGroupedAggregateOperationTest(OpType type, boolean sparse, boolean weights, boolean transpose, ExecType instType) {
//rtplatform for MR
RUNTIME_PLATFORM platformOld = rtplatform;
switch(instType) {
case MR:
rtplatform = RUNTIME_PLATFORM.HADOOP;
break;
case SPARK:
rtplatform = RUNTIME_PLATFORM.SPARK;
break;
default:
rtplatform = RUNTIME_PLATFORM.HYBRID;
break;
}
boolean sparkConfigOld = DMLScript.USE_LOCAL_SPARK_CONFIG;
if (rtplatform == RUNTIME_PLATFORM.SPARK)
DMLScript.USE_LOCAL_SPARK_CONFIG = true;
try {
//determine script and function name
String TEST_NAME = weights ? TEST_NAME2 : TEST_NAME1;
int fn = type.ordinal();
double sparsity = (sparse) ? sparsity1 : sparsity2;
String TEST_CACHE_DIR = "";
if (TEST_CACHE_ENABLED) {
TEST_CACHE_DIR = TEST_NAME + type.ordinal() + "_" + sparsity + "_" + transpose + "/";
}
TestConfiguration config = getTestConfiguration(TEST_NAME);
loadTestConfiguration(config, TEST_CACHE_DIR);
// This is for running the junit test the new way, i.e., construct the arguments directly
String HOME = SCRIPT_DIR + TEST_DIR;
fullDMLScriptName = HOME + TEST_NAME + ".dml";
if (!weights) {
programArgs = new String[] { "-explain", "-args", input("A"), input("B"), Integer.toString(fn), output("C") };
} else {
programArgs = new String[] { "-args", input("A"), input("B"), input("C"), Integer.toString(fn), output("D") };
}
fullRScriptName = HOME + TEST_NAME + ".R";
rCmd = "Rscript" + " " + fullRScriptName + " " + inputDir() + " " + fn + " " + expectedDir();
//generate actual dataset
double[][] A = getRandomMatrix(transpose ? cols : rows, transpose ? rows : cols, -0.05, 1, sparsity, 7);
writeInputMatrix("A", A, true);
MatrixCharacteristics mc1 = new MatrixCharacteristics(transpose ? cols : rows, transpose ? rows : cols, 1000, 1000);
MapReduceTool.writeMetaDataFile(input("A.mtd"), ValueType.DOUBLE, mc1, OutputInfo.TextCellOutputInfo);
double[][] B = TestUtils.round(getRandomMatrix(rows, cols, 1, numGroups, 1.0, 3));
writeInputMatrix("B", B, true);
MatrixCharacteristics mc2 = new MatrixCharacteristics(rows, cols, 1000, 1000);
MapReduceTool.writeMetaDataFile(input("B.mtd"), ValueType.DOUBLE, mc2, OutputInfo.TextCellOutputInfo);
if (weights) {
//currently we use integer weights due to our definition of weight as multiplicity
double[][] C = TestUtils.round(getRandomMatrix(rows, cols, 1, maxWeight, 1.0, 3));
writeInputMatrix("C", C, true);
MatrixCharacteristics mc3 = new MatrixCharacteristics(rows, cols, 1000, 1000);
MapReduceTool.writeMetaDataFile(input("C.mtd"), ValueType.DOUBLE, mc3, OutputInfo.TextCellOutputInfo);
}
//run tests
runTest(true, false, null, -1);
runRScript(true);
//compare matrices
HashMap<CellIndex, Double> dmlfile = readDMLMatrixFromHDFS(weights ? "D" : "C");
HashMap<CellIndex, Double> rfile = readRMatrixFromFS(weights ? "D" : "C");
TestUtils.compareMatrices(dmlfile, rfile, eps, "Stat-DML", "Stat-R");
} catch (IOException ex) {
ex.printStackTrace();
throw new RuntimeException(ex);
} finally {
rtplatform = platformOld;
DMLScript.USE_LOCAL_SPARK_CONFIG = sparkConfigOld;
}
}
use of org.apache.sysml.api.DMLScript.RUNTIME_PLATFORM in project incubator-systemml by apache.
the class AggregateInfTest method runInfAggregateOperationTest.
/**
*
* @param sparseM1
* @param sparseM2
* @param instType
*/
private void runInfAggregateOperationTest(boolean pos, boolean sparse, ExecType instType) {
//rtplatform for MR
RUNTIME_PLATFORM platformOld = rtplatform;
rtplatform = (instType == ExecType.MR) ? RUNTIME_PLATFORM.HADOOP : RUNTIME_PLATFORM.HYBRID;
try {
double sparsity = (sparse) ? sparsity1 : sparsity2;
getAndLoadTestConfiguration(TEST_NAME);
/* This is for running the junit test the new way, i.e., construct the arguments directly */
String HOME = SCRIPT_DIR + TEST_DIR;
fullDMLScriptName = HOME + TEST_NAME + ".dml";
programArgs = new String[] { "-args", input("A"), output("B") };
fullRScriptName = HOME + TEST_NAME + ".R";
rCmd = "Rscript" + " " + fullRScriptName + " " + inputDir() + " " + expectedDir();
//generate actual dataset
double[][] A = getRandomMatrix(rows, cols, -0.05, 1, sparsity, 7);
double infval = pos ? Double.POSITIVE_INFINITY : Double.NEGATIVE_INFINITY;
A[7][7] = infval;
writeInputMatrixWithMTD("A", A, false);
//run test
runTest(true, false, null, -1);
//compare matrices
HashMap<CellIndex, Double> dmlfile = readDMLMatrixFromHDFS("B");
HashMap<CellIndex, Double> compfile = new HashMap<CellIndex, Double>();
compfile.put(new CellIndex(1, 1), infval);
TestUtils.compareMatrices(dmlfile, compfile, eps, "Stat-DML", "Stat-R");
} finally {
rtplatform = platformOld;
}
}
use of org.apache.sysml.api.DMLScript.RUNTIME_PLATFORM in project incubator-systemml by apache.
the class ColSumsSqTest method testColSumsSquared.
/**
* Test the column sums of squared values function, "colSums(X^2)",
* on dense/sparse matrices/vectors with rewrites/no rewrites on
* the CP/Spark/MR platforms.
*
* @param testName The name of this test case.
* @param sparse Whether or not the matrix/vector should be sparse.
* @param vector Boolean value choosing between a vector and a matrix.
* @param rewrites Whether or not to employ algebraic rewrites.
* @param platform Selection between CP/Spark/MR platforms.
*/
private void testColSumsSquared(String testName, boolean sparse, boolean vector, boolean rewrites, ExecType platform) {
// Configure settings for this test case
boolean rewritesOld = OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION;
OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewrites;
RUNTIME_PLATFORM platformOld = rtplatform;
switch(platform) {
case MR:
rtplatform = RUNTIME_PLATFORM.HADOOP;
break;
case SPARK:
rtplatform = RUNTIME_PLATFORM.SPARK;
break;
default:
rtplatform = RUNTIME_PLATFORM.SINGLE_NODE;
break;
}
boolean sparkConfigOld = DMLScript.USE_LOCAL_SPARK_CONFIG;
if (rtplatform == RUNTIME_PLATFORM.SPARK)
DMLScript.USE_LOCAL_SPARK_CONFIG = true;
try {
// Create and load test configuration
getAndLoadTestConfiguration(testName);
String HOME = SCRIPT_DIR + TEST_DIR;
fullDMLScriptName = HOME + testName + ".dml";
programArgs = new String[] { "-explain", "-stats", "-args", input(INPUT_NAME), output(OUTPUT_NAME) };
fullRScriptName = HOME + testName + ".R";
rCmd = "Rscript" + " " + fullRScriptName + " " + inputDir() + " " + expectedDir();
// Generate data
double sparsity = sparse ? sparsity2 : sparsity1;
int columns = vector ? 1 : cols;
double[][] X = getRandomMatrix(rows, columns, -1, 1, sparsity, 7);
writeInputMatrixWithMTD(INPUT_NAME, X, true);
// Run DML and R scripts
runTest(true, false, null, -1);
runRScript(true);
// Compare output matrices
HashMap<CellIndex, Double> dmlfile = readDMLMatrixFromHDFS(OUTPUT_NAME);
HashMap<CellIndex, Double> rfile = readRMatrixFromFS(OUTPUT_NAME);
TestUtils.compareMatrices(dmlfile, rfile, eps, "Stat-DML", "Stat-R");
// occurred for matrix cases and not for vector cases.
if (rewrites && (platform == ExecType.SPARK || platform == ExecType.CP)) {
String prefix = (platform == ExecType.SPARK) ? Instruction.SP_INST_PREFIX : "";
String opcode = prefix + op;
boolean rewriteApplied = Statistics.getCPHeavyHitterOpCodes().contains(opcode);
if (vector)
Assert.assertFalse("Rewrite applied to vector case.", rewriteApplied);
else
Assert.assertTrue("Rewrite not applied to matrix case.", rewriteApplied);
}
} finally {
// Reset settings
OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewritesOld;
rtplatform = platformOld;
DMLScript.USE_LOCAL_SPARK_CONFIG = sparkConfigOld;
}
}
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