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Example 1 with ClassType

use of org.hl7.cql.model.ClassType in project clinical_quality_language by cqframework.

the class Cql2ElmVisitor method visitContextDefinition.

@Override
public Object visitContextDefinition(cqlParser.ContextDefinitionContext ctx) {
    String modelIdentifier = parseString(ctx.modelIdentifier());
    String unqualifiedIdentifier = parseString(ctx.identifier());
    currentContext = modelIdentifier != null ? modelIdentifier + "." + unqualifiedIdentifier : unqualifiedIdentifier;
    if (!isUnfilteredContext(unqualifiedIdentifier)) {
        ModelContext modelContext = libraryBuilder.resolveContextName(modelIdentifier, unqualifiedIdentifier);
        // If this is the first time a context definition is encountered, construct a context definition:
        // define <Context> = element of [<Context model type>]
        Element modelContextDefinition = contextDefinitions.get(modelContext.getName());
        if (modelContextDefinition == null) {
            if (libraryBuilder.hasUsings()) {
                ModelInfo modelInfo = modelIdentifier == null ? libraryBuilder.getModel(libraryInfo.getDefaultModelName()).getModelInfo() : libraryBuilder.getModel(modelIdentifier).getModelInfo();
                // String contextTypeName = modelContext.getName();
                // DataType contextType = libraryBuilder.resolveTypeName(modelInfo.getName(), contextTypeName);
                DataType contextType = modelContext.getType();
                modelContextDefinition = libraryBuilder.resolveParameterRef(modelContext.getName());
                if (modelContextDefinition != null) {
                    contextDefinitions.put(modelContext.getName(), modelContextDefinition);
                } else {
                    Retrieve contextRetrieve = of.createRetrieve().withDataType(libraryBuilder.dataTypeToQName(contextType));
                    track(contextRetrieve, ctx);
                    contextRetrieve.setResultType(new ListType(contextType));
                    String contextClassIdentifier = ((ClassType) contextType).getIdentifier();
                    if (contextClassIdentifier != null) {
                        contextRetrieve.setTemplateId(contextClassIdentifier);
                    }
                    modelContextDefinition = of.createExpressionDef().withName(unqualifiedIdentifier).withContext(currentContext).withExpression(of.createSingletonFrom().withOperand(contextRetrieve));
                    track(modelContextDefinition, ctx);
                    ((ExpressionDef) modelContextDefinition).getExpression().setResultType(contextType);
                    modelContextDefinition.setResultType(contextType);
                    libraryBuilder.addExpression((ExpressionDef) modelContextDefinition);
                    contextDefinitions.put(modelContext.getName(), modelContextDefinition);
                }
            } else {
                modelContextDefinition = of.createExpressionDef().withName(unqualifiedIdentifier).withContext(currentContext).withExpression(of.createNull());
                track(modelContextDefinition, ctx);
                ((ExpressionDef) modelContextDefinition).getExpression().setResultType(libraryBuilder.resolveTypeName("System", "Any"));
                modelContextDefinition.setResultType(((ExpressionDef) modelContextDefinition).getExpression().getResultType());
                libraryBuilder.addExpression((ExpressionDef) modelContextDefinition);
                contextDefinitions.put(modelContext.getName(), modelContextDefinition);
            }
        }
    }
    ContextDef contextDef = of.createContextDef().withName(currentContext);
    track(contextDef, ctx);
    if (libraryBuilder.isCompatibleWith("1.5")) {
        libraryBuilder.addContext(contextDef);
    }
    return currentContext;
}
Also used : ModelInfo(org.hl7.elm_modelinfo.r1.ModelInfo) Element(org.hl7.elm.r1.Element)

Example 2 with ClassType

use of org.hl7.cql.model.ClassType in project clinical_quality_language by cqframework.

the class ElmDataRequirement method applyJoinRequirementTo.

private void applyJoinRequirementTo(ElmJoinRequirement joinRequirement, Retrieve retrieve, ElmRequirementsContext context, ElmQueryRequirement queryRequirements) {
    ElmDataRequirement leftRequirement = queryRequirements.getDataRequirement(joinRequirement.getLeftProperty().getSource());
    ElmDataRequirement rightRequirement = queryRequirements.getDataRequirement(joinRequirement.getRightProperty().getSource());
    if (leftRequirement != null && rightRequirement != null) {
        Retrieve leftRetrieve = leftRequirement.getRetrieve();
        Retrieve rightRetrieve = rightRequirement.getRetrieve();
        // Only report include possibility if the retrieves can both be tied to the data model
        if (leftRetrieve.getDataType() != null && rightRetrieve.getDataType() != null) {
            ClassType leftRetrieveType = getRetrieveType(context, leftRetrieve);
            ClassType rightRetrieveType = getRetrieveType(context, rightRetrieve);
            if (leftRetrieveType != null && rightRetrieveType != null) {
                SearchType leftSearch;
                SearchType rightSearch;
                for (SearchType search : leftRetrieveType.getSearches()) {
                    if (joinRequirement.getLeftProperty().getProperty().getPath().startsWith(search.getPath())) {
                        if (search.getType().isCompatibleWith(rightRetrieveType)) {
                            leftSearch = search;
                            break;
                        }
                    }
                }
                for (SearchType search : rightRetrieveType.getSearches()) {
                    if (joinRequirement.getRightProperty().getProperty().getPath().startsWith(search.getPath())) {
                        if (search.getType().isCompatibleWith(leftRetrieveType)) {
                            rightSearch = search;
                            break;
                        }
                    }
                }
            // Search from the model info should be used to inform the selection, but will in general resolve to multiple choices
            // May be a choice better left to the capabilityStatement-informed planning phase anyway
            }
            // In the absence of search information, either of these formulations is correct, favor primary query sources over withs
            if (leftRetrieve.getLocalId() == null) {
                leftRetrieve.setLocalId(context.generateLocalId());
            }
            if (rightRetrieve.getLocalId() == null) {
                rightRetrieve.setLocalId(context.generateLocalId());
            }
            if (rightRequirement.getQuerySource() instanceof With) {
                leftRetrieve.getInclude().add(new IncludeElement().withIncludeFrom(rightRetrieve.getLocalId()).withRelatedDataType(rightRetrieve.getDataType()).withRelatedProperty(joinRequirement.getLeftProperty().getProperty().getPath()).withIsReverse(false));
                rightRetrieve.setIncludedIn(leftRetrieve.getLocalId());
            } else {
                rightRetrieve.getInclude().add(new IncludeElement().withIncludeFrom(leftRetrieve.getLocalId()).withRelatedDataType(leftRetrieve.getDataType()).withRelatedProperty(joinRequirement.getRightProperty().getProperty().getPath()).withIsReverse(false));
                leftRetrieve.setIncludedIn(rightRetrieve.getLocalId());
            }
        }
    }
}
Also used : SearchType(org.hl7.cql.model.SearchType) ClassType(org.hl7.cql.model.ClassType)

Example 3 with ClassType

use of org.hl7.cql.model.ClassType in project clinical_quality_language by cqframework.

the class BaseTest method assertResultType.

private void assertResultType(CompiledLibrary translatedLibrary, String expressionName, String namespace, String name) {
    ExpressionDef ed = translatedLibrary.resolveExpressionRef(expressionName);
    DataType resultType = ed.getExpression().getResultType();
    assertThat(resultType, instanceOf(ClassType.class));
    ClassType resultClassType = (ClassType) resultType;
    assertThat(resultClassType.getNamespace(), equalTo(namespace));
    assertThat(resultClassType.getSimpleName(), equalTo(name));
}
Also used : QuickDataType.quickDataType(org.cqframework.cql.cql2elm.matchers.QuickDataType.quickDataType) DataType(org.hl7.cql.model.DataType) ClassType(org.hl7.cql.model.ClassType)

Example 4 with ClassType

use of org.hl7.cql.model.ClassType in project clinical_quality_language by cqframework.

the class Cql2ElmVisitor method visitRetrieve.

@Override
@SuppressWarnings("unchecked")
public Retrieve visitRetrieve(cqlParser.RetrieveContext ctx) {
    libraryBuilder.checkLiteralContext();
    List<String> qualifiers = parseQualifiers(ctx.namedTypeSpecifier());
    String model = getModelIdentifier(qualifiers);
    String label = getTypeIdentifier(qualifiers, parseString(ctx.namedTypeSpecifier().referentialOrTypeNameIdentifier()));
    DataType dataType = libraryBuilder.resolveTypeName(model, label);
    if (dataType == null) {
        // ERROR:
        throw new IllegalArgumentException(String.format("Could not resolve type name %s.", label));
    }
    if (!(dataType instanceof ClassType) || !((ClassType) dataType).isRetrievable()) {
        // ERROR:
        throw new IllegalArgumentException(String.format("Specified data type %s does not support retrieval.", label));
    }
    ClassType classType = (ClassType) dataType;
    // BTR -> The original intent of this code was to have the retrieve return the base type, and use the "templateId"
    // element of the retrieve to communicate the "positive" or "negative" profile to the data access layer.
    // However, because this notion of carrying the "profile" through a type is not general, it causes inconsistencies
    // when using retrieve results with functions defined in terms of the same type (see GitHub Issue #131).
    // Based on the discussion there, the retrieve will now return the declared type, whether it is a profile or not.
    // ProfileType profileType = dataType instanceof ProfileType ? (ProfileType)dataType : null;
    // NamedType namedType = profileType == null ? classType : (NamedType)classType.getBaseType();
    NamedType namedType = classType;
    ModelInfo modelInfo = libraryBuilder.getModel(namedType.getNamespace()).getModelInfo();
    boolean useStrictRetrieveTyping = modelInfo.isStrictRetrieveTyping() != null && modelInfo.isStrictRetrieveTyping();
    Retrieve retrieve = of.createRetrieve().withDataType(libraryBuilder.dataTypeToQName((DataType) namedType)).withTemplateId(classType.getIdentifier());
    if (ctx.contextIdentifier() != null) {
        List<String> identifiers = (List<String>) visit(ctx.contextIdentifier());
        Expression contextExpression = resolveQualifiedIdentifier(identifiers);
        retrieve.setContext(contextExpression);
    }
    if (ctx.terminology() != null) {
        if (ctx.codePath() != null) {
            String identifiers = (String) visit(ctx.codePath());
            retrieve.setCodeProperty(identifiers);
        } else if (classType.getPrimaryCodePath() != null) {
            retrieve.setCodeProperty(classType.getPrimaryCodePath());
        }
        Property property = null;
        CqlCompilerException propertyException = null;
        if (retrieve.getCodeProperty() == null) {
            // ERROR:
            // WARNING:
            propertyException = new CqlSemanticException("Retrieve has a terminology target but does not specify a code path and the type of the retrieve does not have a primary code path defined.", useStrictRetrieveTyping ? CqlCompilerException.ErrorSeverity.Error : CqlCompilerException.ErrorSeverity.Warning, getTrackBack(ctx));
            libraryBuilder.recordParsingException(propertyException);
        } else {
            try {
                DataType codeType = libraryBuilder.resolvePath((DataType) namedType, retrieve.getCodeProperty());
                property = of.createProperty().withPath(retrieve.getCodeProperty());
                property.setResultType(codeType);
            } catch (Exception e) {
                // ERROR:
                // WARNING:
                propertyException = new CqlSemanticException(String.format("Could not resolve code path %s for the type of the retrieve %s.", retrieve.getCodeProperty(), namedType.getName()), useStrictRetrieveTyping ? CqlCompilerException.ErrorSeverity.Error : CqlCompilerException.ErrorSeverity.Warning, getTrackBack(ctx), e);
                libraryBuilder.recordParsingException(propertyException);
            }
        }
        Expression terminology = null;
        if (ctx.terminology().qualifiedIdentifierExpression() != null) {
            List<String> identifiers = (List<String>) visit(ctx.terminology());
            terminology = resolveQualifiedIdentifier(identifiers);
            track(terminology, ctx.terminology().qualifiedIdentifierExpression());
        } else {
            terminology = parseExpression(ctx.terminology().expression());
        }
        String codeComparator = ctx.codeComparator() != null ? (String) visit(ctx.codeComparator()) : null;
        // Resolve the terminology target using an in or ~ operator
        try {
            if (codeComparator == null) {
                codeComparator = (terminology.getResultType() instanceof ListType || (libraryBuilder.isCompatibleWith("1.5") && terminology.getResultType().isSubTypeOf(libraryBuilder.resolveTypeName("System", "Vocabulary")))) ? "in" : "~";
            }
            if (property == null) {
                throw propertyException;
            }
            switch(codeComparator) {
                case "in":
                    {
                        Expression in = libraryBuilder.resolveIn(property, terminology);
                        if (in instanceof In) {
                            retrieve.setCodes(((In) in).getOperand().get(1));
                        } else if (in instanceof InValueSet) {
                            retrieve.setCodes(((InValueSet) in).getValueset());
                        } else if (in instanceof InCodeSystem) {
                            retrieve.setCodes(((InCodeSystem) in).getCodesystem());
                        } else if (in instanceof AnyInValueSet) {
                            retrieve.setCodes(((AnyInValueSet) in).getValueset());
                        } else if (in instanceof AnyInCodeSystem) {
                            retrieve.setCodes(((AnyInCodeSystem) in).getCodesystem());
                        } else {
                            // ERROR:
                            // WARNING:
                            libraryBuilder.recordParsingException(new CqlSemanticException(String.format("Unexpected membership operator %s in retrieve", in.getClass().getSimpleName()), useStrictRetrieveTyping ? CqlCompilerException.ErrorSeverity.Error : CqlCompilerException.ErrorSeverity.Warning, getTrackBack(ctx)));
                        }
                    }
                    break;
                case "~":
                    {
                        // Resolve with equivalent to verify the type of the target
                        BinaryExpression equivalent = of.createEquivalent().withOperand(property, terminology);
                        libraryBuilder.resolveBinaryCall("System", "Equivalent", equivalent);
                        // Automatically promote to a list for use in the retrieve target
                        if (!(equivalent.getOperand().get(1).getResultType() instanceof ListType)) {
                            retrieve.setCodes(libraryBuilder.resolveToList(equivalent.getOperand().get(1)));
                        } else {
                            retrieve.setCodes(equivalent.getOperand().get(1));
                        }
                    }
                    break;
                case "=":
                    {
                        // Resolve with equality to verify the type of the source and target
                        BinaryExpression equal = of.createEqual().withOperand(property, terminology);
                        libraryBuilder.resolveBinaryCall("System", "Equal", equal);
                        // Automatically promote to a list for use in the retrieve target
                        if (!(equal.getOperand().get(1).getResultType() instanceof ListType)) {
                            retrieve.setCodes(libraryBuilder.resolveToList(equal.getOperand().get(1)));
                        } else {
                            retrieve.setCodes(equal.getOperand().get(1));
                        }
                    }
                    break;
                default:
                    // ERROR:
                    // WARNING:
                    libraryBuilder.recordParsingException(new CqlSemanticException(String.format("Unknown code comparator % in retrieve", codeComparator), useStrictRetrieveTyping ? CqlCompilerException.ErrorSeverity.Error : CqlCompilerException.ErrorSeverity.Warning, getTrackBack(ctx.codeComparator())));
            }
            retrieve.setCodeComparator(codeComparator);
            // In that case, convert to a list of code (Union the Code elements of the Concepts in the list)
            if (retrieve.getCodes() != null && retrieve.getCodes().getResultType() != null && retrieve.getCodes().getResultType() instanceof ListType && ((ListType) retrieve.getCodes().getResultType()).getElementType().equals(libraryBuilder.resolveTypeName("System", "Concept"))) {
                if (retrieve.getCodes() instanceof ToList) {
                    // ToList will always have a single argument
                    ToList toList = (ToList) retrieve.getCodes();
                    // If that argument is a ToConcept, replace the ToList argument with the code (skip the implicit conversion, the data access layer is responsible for it)
                    if (toList.getOperand() instanceof ToConcept) {
                        toList.setOperand(((ToConcept) toList.getOperand()).getOperand());
                    } else {
                        // Otherwise, access the codes property of the resulting Concept
                        Expression codesAccessor = libraryBuilder.buildProperty(toList.getOperand(), "codes", false, toList.getOperand().getResultType());
                        retrieve.setCodes(codesAccessor);
                    }
                } else {
                    // WARNING:
                    libraryBuilder.recordParsingException(new CqlSemanticException("Terminology target is a list of concepts, but expects a list of codes", CqlCompilerException.ErrorSeverity.Warning, getTrackBack(ctx)));
                }
            }
        } catch (Exception e) {
            // it shouldn't prevent translation unless the modelinfo indicates strict retrieve typing
            if ((libraryBuilder.isCompatibleWith("1.5") && !(terminology.getResultType().isSubTypeOf(libraryBuilder.resolveTypeName("System", "Vocabulary")))) || (!libraryBuilder.isCompatibleWith("1.5") && !(terminology.getResultType() instanceof ListType))) {
                retrieve.setCodes(libraryBuilder.resolveToList(terminology));
            } else {
                retrieve.setCodes(terminology);
            }
            retrieve.setCodeComparator(codeComparator);
            // ERROR:
            // WARNING:
            libraryBuilder.recordParsingException(new CqlSemanticException("Could not resolve membership operator for terminology target of the retrieve.", useStrictRetrieveTyping ? CqlCompilerException.ErrorSeverity.Error : CqlCompilerException.ErrorSeverity.Warning, getTrackBack(ctx), e));
        }
    }
    retrieves.add(retrieve);
    retrieve.setResultType(new ListType((DataType) namedType));
    return retrieve;
}
Also used : ModelInfo(org.hl7.elm_modelinfo.r1.ModelInfo) List(java.util.List)

Aggregations

ClassType (org.hl7.cql.model.ClassType)2 ModelInfo (org.hl7.elm_modelinfo.r1.ModelInfo)2 List (java.util.List)1 QuickDataType.quickDataType (org.cqframework.cql.cql2elm.matchers.QuickDataType.quickDataType)1 DataType (org.hl7.cql.model.DataType)1 SearchType (org.hl7.cql.model.SearchType)1 Element (org.hl7.elm.r1.Element)1