Examples with IndexOf org.hl7.elm.r1.IndexOf used on opensource projects

Example 51 with IndexOf

use of org.hl7.elm.r1.IndexOf in project nia-patient-switching-standard-adaptor by NHSDigital.

the class COPCMessageHandler method extractFragmentsAndLog.

private void extractFragmentsAndLog(PatientMigrationRequest migrationRequest, PatientAttachmentLog parentAttachmentLog, String conversationId, InboundMessage message) throws ParseException, SAXException, ValidationException, InlineAttachmentProcessingException {
    List<EbxmlReference> attachmentReferenceDescription = new ArrayList<>();
    attachmentReferenceDescription.addAll(xmlParseUtilService.getEbxmlAttachmentsData(message));
    // first item is always the message payload reference so skip it
    for (var index = 1; index < attachmentReferenceDescription.size(); index++) {
        var payloadReference = attachmentReferenceDescription.get(index);
        var descriptionString = "";
        var messageId = "";
        var fileUpload = false;
        // in this instance there should only ever be one CID on a fragment index file
        if (payloadReference.getHref().contains("cid:")) {
            messageId = payloadReference.getHref().substring(payloadReference.getHref().indexOf("cid:") + "cid:".length());
            descriptionString = message.getAttachments().get(0).getDescription();
            // upload the file
            attachmentHandlerService.storeAttachments(message.getAttachments(), conversationId);
            fileUpload = true;
        } else {
            var localMessageId = payloadReference.getHref().substring(payloadReference.getHref().indexOf("mid:") + "mid:".length());
            messageId = localMessageId;
            var externalAttachmentResult = message.getExternalAttachments().stream().filter(attachment -> attachment.getMessageId().equals(localMessageId)).findFirst();
            if (externalAttachmentResult == null || externalAttachmentResult.stream().count() != 1) {
                throw new ValidationException("External Attachment in payload header does not match a received External Attachment ID");
            }
            var externalAttachment = externalAttachmentResult.get();
            descriptionString = externalAttachment.getDescription();
        }
        PatientAttachmentLog fragmentLog = patientAttachmentLogService.findAttachmentLog(messageId, conversationId);
        if (fragmentLog != null) {
            updateFragmentLog(fragmentLog, parentAttachmentLog, descriptionString, index - 1, parentAttachmentLog.getLargeAttachment());
            patientAttachmentLogService.updateAttachmentLog(fragmentLog, conversationId);
        } else {
            PatientAttachmentLog newFragmentLog = buildPatientAttachmentLog(messageId, descriptionString, parentAttachmentLog.getMid(), migrationRequest.getId(), index - 1, fileUpload, parentAttachmentLog.getLargeAttachment());
            patientAttachmentLogService.addAttachmentLog(newFragmentLog);
        }
    }
}