Examples with Invariant org.hl7.fhir.definitions.model.Invariant used on opensource projects

Example 21 with Invariant

use of org.hl7.fhir.definitions.model.Invariant in project kindling by HL7.

the class OldSpreadsheetParser method processExtension.

private int processExtension(ElementDefn extensions, Sheet sheet, int row, Definitions definitions, String uri, Profile ap, List<ValidationMessage> issues, Map<String, Invariant> invariants, WorkGroup wg) throws Exception {
    // first, we build the extension definition
    StructureDefinition ex = new StructureDefinition();
    ex.setUserData(ToolResourceUtilities.NAME_RES_IG, ig == null ? "core" : ig.getCode());
    ex.setUserData("profile", ap);
    ex.setKind(StructureDefinitionKind.COMPLEXTYPE);
    ex.setType("Extension");
    ex.setBaseDefinition("http://hl7.org/fhir/StructureDefinition/Extension");
    ex.setDerivation(TypeDerivationRule.CONSTRAINT);
    ex.setAbstract(false);
    ex.setFhirVersion(version);
    ex.setVersion(version.toCode());
    if (wg != null)
        ToolingExtensions.setCodeExtension(ex, ToolingExtensions.EXT_WORKGROUP, wg.getCode());
    String fmm = sheet.getColumn(row, "FMM");
    if (Utilities.noString(fmm))
        // default fmm value for extensions
        fmm = "1";
    ToolingExtensions.addIntegerExtension(ex, ToolingExtensions.EXT_FMM_LEVEL, Integer.parseInt(fmm));
    if (ap.hasMetadata("fmm-level"))
        ToolingExtensions.addIntegerExtension(ex, ToolingExtensions.EXT_FMM_LEVEL, Integer.parseInt(ap.getFmmLevel()));
    if (ap.hasMetadata("workgroup"))
        ToolingExtensions.setCodeExtension(ex, ToolingExtensions.EXT_WORKGROUP, ap.getWg());
    ToolResourceUtilities.updateUsage(ex, ap.getCategory());
    String name = sheet.getColumn(row, "Code");
    String context = null;
    if (Utilities.noString(name))
        throw new Exception("No code found on Extension at " + getLocation(row));
    if (name.contains("."))
        throw new Exception("Extension Definition Error: Extension names cannot contain '.': " + name + "  at " + getLocation(row));
    ex.setUrl(uri + name);
    ex.setId(tail(ex.getUrl()));
    ex.setUserData("path", "extension-" + ex.getId().toLowerCase() + ".html");
    ap.getExtensions().add(ex);
    if (context == null) {
        ExtensionContextType ct = readContextType(sheet.getColumn(row, "Context Type"), row);
        if (sheet.hasColumn("Context Invariant"))
            for (String s : sheet.getColumn(row, "Context Invariant").split("~")) ex.addContextInvariant(s);
        String cc = checkContextMacro(sheet.getColumn(row, "Context"));
        if (!Utilities.noString(cc))
            for (String c : cc.split("\\;")) {
                StructureDefinitionContextComponent ec = ex.addContext();
                ec.setExpression(c.trim());
                ec.setType(ct);
                if (definitions != null) {
                    definitions.checkContextValid(ec, this.name, this.context);
                }
            }
    }
    ex.setTitle(sheet.getColumn(row, "Display"));
    ElementDefn exe = new ElementDefn();
    exe.setName(sheet.getColumn(row, "Code"));
    ElementDefn exu = new ElementDefn();
    exu.setName("url");
    exu.setXmlAttribute(true);
    exe.getElements().add(exu);
    exu.setFixed(new UriType(ex.getUrl()));
    exu.getTypes().add(new TypeRef().setName("uri"));
    if (invariants != null) {
        for (Invariant inv : invariants.values()) {
            if (inv.getContext().equals(name))
                exe.getInvariants().put(inv.getId(), inv);
        }
    }
    parseExtensionElement(sheet, row, definitions, exe, false);
    String sl = exe.getShortDefn();
    ex.setName(sheet.getColumn(row, "Name"));
    if (!ex.hasName())
        ex.setName(exe.getName());
    if (!ex.hasName())
        ex.setName(ex.getTitle());
    if (!ex.hasName() && !Utilities.noString(sl))
        ex.setName(sl);
    if (!ex.hasName())
        throw new Exception("Extension " + ex.getUrl() + " missing name at " + getLocation(row));
    ex.setDescription(preProcessMarkdown(exe.getDefinition(), "Extension Definition"));
    ex.setPublisher(ap.metadata("author.name"));
    if (ap.hasMetadata("author.reference"))
        ex.addContact().getTelecom().add(Factory.newContactPoint(ContactPointSystem.URL, ap.metadata("author.reference")));
    // <code> opt Zero+ Coding assist with indexing and finding</code>
    if (ap.hasMetadata("date"))
        ex.setDateElement(Factory.newDateTime(ap.metadata("date").substring(0, 10)));
    else
        ex.setDate(genDate.getTime());
    if (ap.hasMetadata("status"))
        ex.setStatus(PublicationStatus.fromCode(ap.metadata("status")));
    row++;
    if (ig == null || ig.isCore()) {
        if (!ex.getUrl().startsWith("http://hl7.org/fhir/StructureDefinition/") && !ex.getUrl().startsWith("http://fhir-registry.smarthealthit.org/StructureDefinition/"))
            throw new Exception("extension " + ex.getUrl() + " is not valid in the publication tooling");
    } else {
        if (!ex.getUrl().startsWith("http://hl7.org/fhir/StructureDefinition/" + ig.getCode() + "-"))
            throw new Exception("extension " + ex.getUrl() + " is not valid for the IG " + ig.getCode() + " in the publication tooling");
    }
    while (row < sheet.getRows().size() && sheet.getColumn(row, "Code").startsWith(name + ".")) {
        String n = sheet.getColumn(row, "Code");
        ElementDefn p = findContext(exe, n.substring(0, n.lastIndexOf(".")), "Extension Definition " + name);
        ElementDefn child = new ElementDefn();
        p.getElements().add(child);
        child.setName(n.substring(n.lastIndexOf(".") + 1));
        child.setProfileName(child.getName());
        parseExtensionElement(sheet, row, definitions, child, true);
        if (invariants != null) {
            for (Invariant inv : invariants.values()) {
                if (inv.getContext().equals(n))
                    child.getInvariants().put(inv.getId(), inv);
            }
        }
        row++;
    }
    ProfileGenerator gen = new ProfileGenerator(definitions, null, pkp, null, version, null, fpUsages, null, null, rc);
    ProfileUtilities utils = new ProfileUtilities(this.context, issues, pkp);
    gen.convertElements(exe, ex, null);
    ex.getDifferential().getElementFirstRep().getType().clear();
    utils.setIds(ex, false);
    StructureDefinition base = definitions != null ? definitions.getSnapShotForType("Extension") : this.context.fetchResource(StructureDefinition.class, "http://hl7.org/fhir/StructureDefinition/Extension");
    List<String> errors = new ArrayList<String>();
    utils.sortDifferential(base, ex, "extension " + ex.getUrl(), errors, false);
    assert (errors.size() == 0);
    utils.generateSnapshot(base, ex, ex.getUrl(), "http://hl7.org/fhir", ex.getName());
    utils.setIds(ex, true);
    new ExtensionDefinitionValidator(context).validate(ex);
    this.context.cacheResource(ex);
    return row;
}

Example 22 with Invariant

use of org.hl7.fhir.definitions.model.Invariant in project kindling by HL7.

the class OldSpreadsheetParser method copyInvariants.

private void copyInvariants(ResourceDefn resource) {
    if (!resource.isInterface()) {
        String abb = ini.getStringProperty("tla", resource.getName());
        if (abb == null)
            abb = ini.getStringProperty("tla", resource.getName().toLowerCase());
        ResourceDefn t2 = definitions.getBaseResources().get(template.getRoot().typeCode());
        if (t2 != null && t2.isInterface()) {
            String t2Title = Utilities.unCamelCase(t2.getName());
            for (String n : t2.getRoot().getInvariants().keySet()) {
                Invariant inv = t2.getRoot().getInvariants().get(n);
                resource.getRoot().getInvariants().put(n.replace("inv", abb), new Invariant(inv, t2.getName(), resource.getName(), t2Title, abb));
            }
        }
        for (String n : template.getRoot().getInvariants().keySet()) {
            Invariant inv = template.getRoot().getInvariants().get(n);
            resource.getRoot().getInvariants().put(n.replace("inv", abb), new Invariant(inv, template.getName(), resource.getName(), templateTitle, abb));
        }
    }
}

Example 23 with Invariant

use of org.hl7.fhir.definitions.model.Invariant in project kindling by HL7.

the class OldSpreadsheetParser method readInvariants.

private Map<String, Invariant> readInvariants(Sheet sheet, String id, String sheetName) throws Exception {
    Map<String, Invariant> result = new HashMap<String, Invariant>();
    for (int row = 0; row < sheet.rows.size(); row++) {
        Invariant inv = new Invariant();
        String s = sheet.getColumn(row, "Id");
        if (!s.startsWith("!")) {
            inv.setId(s.contains("-") ? s : getAbbreviationFor(id) + "-" + s);
            inv.setRequirements(sheet.getColumn(row, "Requirements"));
            inv.setContext(sheet.getColumn(row, "Context"));
            inv.setEnglish(sheet.getColumn(row, "English"));
            inv.setXpath(sheet.getColumn(row, "XPath"));
            inv.setExpression(sheet.getColumn(row, "Expression"));
            inv.setExplanation(sheet.getColumn(row, "Explanation"));
            if (Utilities.noString(inv.getExpression()))
                throw new Exception("missing expression " + getLocation(row));
            inv.setSeverity(sheet.getColumn(row, "Severity"));
            inv.setTurtle(sheet.getColumn(row, "RDF"));
            inv.setOcl(sheet.getColumn(row, "OCL"));
            if (s.equals("") || result.containsKey(s))
                throw new Exception("duplicate or missing invariant id " + getLocation(row));
            result.put(s, inv);
        }
    }
    return result;
}

Example 24 with Invariant

use of org.hl7.fhir.definitions.model.Invariant in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method describeExtensionContext.

public static String describeExtensionContext(StructureDefinition ext) {
    StringBuilder b = new StringBuilder();
    b.append("Use on ");
    for (int i = 0; i < ext.getContext().size(); i++) {
        StructureDefinitionContextComponent ec = ext.getContext().get(i);
        if (i > 0)
            b.append(i < ext.getContext().size() - 1 ? ", " : " or ");
        b.append(ec.getType().getDisplay());
        b.append(" ");
        b.append(ec.getExpression());
    }
    if (ext.hasContextInvariant()) {
        b.append(", with <a href=\"structuredefinition-definitions.html#StructureDefinition.contextInvariant\">Context Invariant</a> = ");
        boolean first = true;
        for (StringType s : ext.getContextInvariant()) {
            if (first)
                first = false;
            else
                b.append(", ");
            b.append("<code>" + s.getValue() + "</code>");
        }
    }
    return b.toString();
}

Example 25 with Invariant

use of org.hl7.fhir.definitions.model.Invariant in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method describeExtensionContext.

public static String describeExtensionContext(StructureDefinition ext) {
    StringBuilder b = new StringBuilder();
    b.append("Use on ");
    for (int i = 0; i < ext.getContext().size(); i++) {
        StructureDefinitionContextComponent ec = ext.getContext().get(i);
        if (i > 0)
            b.append(i < ext.getContext().size() - 1 ? ", " : " or ");
        b.append(ec.getType().getDisplay());
        b.append(" ");
        b.append(ec.getExpression());
    }
    if (ext.hasContextInvariant()) {
        b.append(", with <a href=\"structuredefinition-definitions.html#StructureDefinition.contextInvariant\">Context Invariant</a> = ");
        boolean first = true;
        for (StringType s : ext.getContextInvariant()) {
            if (first)
                first = false;
            else
                b.append(", ");
            b.append("<code>" + s.getValue() + "</code>");
        }
    }
    return b.toString();
}