Examples with W5Entry org.hl7.fhir.definitions.model.W5Entry used on opensource projects

Example 1 with W5Entry

use of org.hl7.fhir.definitions.model.W5Entry in project kindling by HL7.

the class OldSpreadsheetParser method checkW5.

private String checkW5(String value, String path) throws Exception {
    if (Utilities.noString(value))
        return null;
    if (!definitions.getW5s().containsKey(value)) {
        if (!value.contains(".")) {
            throw new Exception("Unknown w5 value " + value + " at " + path);
        } else {
            String[] vs = value.split("\\.");
            if (vs.length != 2)
                throw new Exception("improper w5 value " + value + " at " + path);
            if (!definitions.getW5s().containsKey(vs[0]))
                throw new Exception("Unknown w5 value " + value + " at " + path);
            W5Entry w5 = definitions.getW5s().get(vs[0]);
            if (!w5.getSubClasses().contains(vs[1]))
                throw new Exception("Unknown w5 value " + value + " at " + path);
        }
    }
    return value;
}

Example 2 with W5Entry

use of org.hl7.fhir.definitions.model.W5Entry in project kindling by HL7.

the class SourceParser method loadW5s.

private void loadW5s() throws IOException {
    if (new File(Utilities.path(srcDir, "w5.ini")).exists()) {
        IniFile w5 = new IniFile(Utilities.path(srcDir, "w5.ini"));
        for (String n : w5.getPropertyNames("names")) {
            W5Entry w5o = new W5Entry(n, w5.getStringProperty("names", n), w5.getBooleanProperty("display", n), w5.getStringProperty("subclasses", n), w5.getStringProperty("fivews", n));
            definitions.getW5list().add(w5o);
            definitions.getW5s().put(n, w5o);
        }
    }
}

Example 3 with W5Entry

use of org.hl7.fhir.definitions.model.W5Entry in project kindling by HL7.

the class W5TurtleGenerator method executeMain.

public void executeMain() throws Exception {
    OntModel model = ModelFactory.createOntologyModel(OntModelSpec.OWL_MEM);
    model.setNsPrefix(RDFNamespace.W5.getPrefix(), RDFNamespace.W5.getURI());
    model.setNsPrefix(RDFNamespace.FHIR.getPrefix(), RDFNamespace.FHIR.getURI());
    Ontology w5 = model.createOntology("http://hl7.org/fhir/w5.ttl");
    w5.addProperty(RDFS.label, "W5 Categorization");
    w5.addProperty(RDFS.comment, "FHIR W5 categorization is a preliminary classification of the fhir property");
    w5.addVersionInfo("FHIR W5 categorization (Preliminary)");
    w5.addProperty(OWL2.versionIRI, "http://build.fhir.org/w5.ttl");
    // The only way to differentiate predicates from classes is the existence of subclasses -- if something
    // has subclasses or is a subclass then it is a class.  Otherwise it is a predicate...
    Set<String> w5classes = new HashSet<String>();
    for (W5Entry e : definitions.getW5list()) {
        Set<String> escs = e.getSubClasses();
        if (!escs.isEmpty()) {
            w5classes.add(e.getCode());
            for (String s : e.getSubClasses()) {
                if (!s.contains("."))
                    s = e.getCode() + '.' + s;
                w5classes.add(s);
            }
        }
    }
    // TODO: Temporary fix -- add 'when' element
    OntProperty wp = model.createObjectProperty(RDFNamespace.W5.uriFor("when"));
    wp.addLabel("when", null);
    wp.addComment("point in time", null);
    for (W5Entry e : definitions.getW5list()) {
        String es = e.getCode();
        if (w5classes.contains(es)) {
            OntClass ec = model.createClass(RDFNamespace.W5.uriFor(es));
            ec.addLabel(es, null);
            ec.addComment(e.getDescription(), null);
            for (String s : e.getSubClasses()) {
                String s_uri = RDFNamespace.W5.uriFor(s.contains(".") ? s : e.getCode() + "." + s);
                OntClass c = model.createClass(s_uri);
                c.addSuperClass(ec);
                c.addLabel(s, null);
            }
        } else {
            OntProperty ep = model.createObjectProperty(RDFNamespace.W5.uriFor(es));
            ep.addLabel(es, null);
            ep.addComment(e.getDescription(), null);
            String esroot = es;
            while (esroot.contains(".")) {
                esroot = esroot.substring(0, esroot.lastIndexOf('.'));
                ep.addSuperProperty(model.createProperty(RDFNamespace.W5.uriFor(esroot)));
            }
        }
    }
    commit(model, true);
}

Example 4 with W5Entry

use of org.hl7.fhir.definitions.model.W5Entry in project kindling by HL7.

the class PageProcessor method genW5.

private String genW5(boolean types) throws Exception {
    StringBuilder b = new StringBuilder();
    b.append("<table border=\"1\">\r\n<tr>\r\n");
    List<W5Entry> items = new ArrayList<W5Entry>();
    for (W5Entry e : definitions.getW5list()) if (e.isDisplay())
        items.add(e);
    b.append("<td>Resource</td>");
    for (W5Entry e : items) {
        b.append("<td><span title=\"").append(Utilities.escapeXml(definitions.getW5s().get(e.getCode()).getDescription())).append("\">").append(e.getCode()).append("</span></td>");
    }
    b.append("</tr>\r\n");
    processW5(b, items, "clinical", types);
    processW5(b, items, "administrative", types);
    processW5(b, items, "workflow", types);
    processW5(b, items, "infrastructure", types);
    processW5(b, items, "conformance", types);
    processW5(b, items, "financial", types);
    b.append("</table>\r\n");
    return b.toString();
}

Example 5 with W5Entry

use of org.hl7.fhir.definitions.model.W5Entry in project kindling by HL7.

the class PageProcessor method processW5.

private void processW5(StringBuilder b, List<W5Entry> items, String cat, boolean types) throws Exception {
    b.append("<tr><td colspan=\"").append(Integer.toString(items.size() + 1)).append("\"><b>").append(Utilities.escapeXml(definitions.getW5s().get(cat).getDescription())).append("</b></td></tr>\r\n");
    for (String rn : definitions.sortedResourceNames()) {
        ResourceDefn r = definitions.getResourceByName(rn);
        if (r.getRoot().getW5().startsWith(cat)) {
            b.append("<tr>\r\n <td>").append(rn).append(" (").append(r.getFmmLevel()).append(")").append("</td>\r\n");
            for (W5Entry e : items) {
                b.append(" <td>");
                addMatchingFields(b, r.getRoot().getElements(), r.getRoot().getName(), e.getCode(), true, types);
                b.append("</td>\r\n");
            }
            b.append("</tr>\r\n");
        }
    }
}