use of org.hl7.fhir.dstu2.model.Annotation in project org.hl7.fhir.core by hapifhir.
the class ListRenderer method render.
public boolean render(XhtmlNode x, ListResource list) throws FHIRFormatError, DefinitionException, IOException {
if (list.hasTitle()) {
x.h2().tx(list.getTitle());
}
XhtmlNode t = x.table("clstu");
XhtmlNode tr = t.tr();
if (list.hasDate()) {
tr.td().tx("Date: " + list.getDate().toLocaleString());
}
if (list.hasMode()) {
tr.td().tx("Mode: " + list.getMode().getDisplay());
}
if (list.hasStatus()) {
tr.td().tx("Status: " + list.getStatus().getDisplay());
}
if (list.hasCode()) {
tr.td().tx("Code: " + display(list.getCode()));
}
tr = t.tr();
if (list.hasSubject()) {
shortForRef(tr.td().txN("Subject: "), list.getSubject());
}
if (list.hasEncounter()) {
shortForRef(tr.td().txN("Encounter: "), list.getEncounter());
}
if (list.hasSource()) {
shortForRef(tr.td().txN("Source: "), list.getEncounter());
}
if (list.hasOrderedBy()) {
tr.td().tx("Order: " + display(list.getOrderedBy()));
}
for (Annotation a : list.getNote()) {
renderAnnotation(x, a);
}
boolean flag = false;
boolean deleted = false;
boolean date = false;
for (ListResourceEntryComponent e : list.getEntry()) {
flag = flag || e.hasFlag();
deleted = deleted || e.hasDeleted();
date = date || e.hasDate();
}
t = x.table("grid");
tr = t.tr().style("backgound-color: #eeeeee");
tr.td().b().tx("Items");
if (date) {
tr.td().tx("Date");
}
if (flag) {
tr.td().tx("Flag");
}
if (deleted) {
tr.td().tx("Deleted");
}
for (ListResourceEntryComponent e : list.getEntry()) {
tr = t.tr();
shortForRef(tr.td(), e.getItem());
if (date) {
tr.td().tx(e.hasDate() ? e.getDate().toLocaleString() : "");
}
if (flag) {
tr.td().tx(e.hasFlag() ? display(e.getFlag()) : "");
}
if (deleted) {
tr.td().tx(e.hasDeleted() ? Boolean.toString(e.getDeleted()) : "");
}
}
return false;
}
use of org.hl7.fhir.dstu2.model.Annotation in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method renderLeaf.
private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints, String path) throws FHIRException, UnsupportedEncodingException, IOException {
if (ew == null)
return;
Base e = ew.getBase();
if (e instanceof StringType)
x.addText(((StringType) e).getValue());
else if (e instanceof CodeType)
x.addText(((CodeType) e).getValue());
else if (e instanceof IdType)
x.addText(((IdType) e).getValue());
else if (e instanceof Extension)
return;
else if (e instanceof InstantType)
x.addText(((InstantType) e).toHumanDisplay());
else if (e instanceof DateTimeType)
x.addText(((DateTimeType) e).toHumanDisplay());
else if (e instanceof Base64BinaryType)
x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
else if (e instanceof org.hl7.fhir.dstu3.model.DateType)
x.addText(((org.hl7.fhir.dstu3.model.DateType) e).toHumanDisplay());
else if (e instanceof Enumeration) {
Object ev = ((Enumeration<?>) e).getValue();
// todo: look up a display name if there is one
x.addText(ev == null ? "" : ev.toString());
} else if (e instanceof BooleanType)
x.addText(((BooleanType) e).getValue().toString());
else if (e instanceof CodeableConcept) {
renderCodeableConcept((CodeableConcept) e, x, showCodeDetails);
} else if (e instanceof Coding) {
renderCoding((Coding) e, x, showCodeDetails);
} else if (e instanceof Annotation) {
renderAnnotation((Annotation) e, x);
} else if (e instanceof Identifier) {
renderIdentifier((Identifier) e, x);
} else if (e instanceof org.hl7.fhir.dstu3.model.IntegerType) {
x.addText(Integer.toString(((org.hl7.fhir.dstu3.model.IntegerType) e).getValue()));
} else if (e instanceof org.hl7.fhir.dstu3.model.DecimalType) {
x.addText(((org.hl7.fhir.dstu3.model.DecimalType) e).getValue().toString());
} else if (e instanceof HumanName) {
renderHumanName((HumanName) e, x);
} else if (e instanceof SampledData) {
renderSampledData((SampledData) e, x);
} else if (e instanceof Address) {
renderAddress((Address) e, x);
} else if (e instanceof ContactPoint) {
renderContactPoint((ContactPoint) e, x);
} else if (e instanceof UriType) {
renderUri((UriType) e, x);
} else if (e instanceof Timing) {
renderTiming((Timing) e, x);
} else if (e instanceof Range) {
renderRange((Range) e, x);
} else if (e instanceof Quantity) {
renderQuantity((Quantity) e, x, showCodeDetails);
} else if (e instanceof Ratio) {
renderQuantity(((Ratio) e).getNumerator(), x, showCodeDetails);
x.tx("/");
renderQuantity(((Ratio) e).getDenominator(), x, showCodeDetails);
} else if (e instanceof Period) {
Period p = (Period) e;
x.addText(!p.hasStart() ? "??" : p.getStartElement().toHumanDisplay());
x.tx(" --> ");
x.addText(!p.hasEnd() ? "(ongoing)" : p.getEndElement().toHumanDisplay());
} else if (e instanceof Reference) {
Reference r = (Reference) e;
XhtmlNode c = x;
ResourceWithReference tr = null;
if (r.hasReferenceElement()) {
tr = resolveReference(res, r.getReference());
if (!r.getReference().startsWith("#")) {
if (tr != null && tr.getReference() != null)
c = x.ah(tr.getReference());
else
c = x.ah(r.getReference());
}
}
// what to display: if text is provided, then that. if the reference was resolved, then show the generated narrative
if (r.hasDisplayElement()) {
c.addText(r.getDisplay());
if (tr != null && tr.getResource() != null) {
c.tx(". Generated Summary: ");
generateResourceSummary(c, tr.getResource(), true, r.getReference().startsWith("#"));
}
} else if (tr != null && tr.getResource() != null) {
generateResourceSummary(c, tr.getResource(), r.getReference().startsWith("#"), r.getReference().startsWith("#"));
} else {
c.addText(r.getReference());
}
} else if (e instanceof Resource) {
return;
} else if (e instanceof ElementDefinition) {
x.tx("todo-bundle");
} else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta)) {
StructureDefinition sd = context.fetchTypeDefinition(e.fhirType());
if (sd == null)
throw new NotImplementedException("type " + e.getClass().getName() + " not handled yet, and no structure found");
else
generateByProfile(res, sd, ew, sd.getSnapshot().getElement(), sd.getSnapshot().getElementFirstRep(), getChildrenForPath(sd.getSnapshot().getElement(), sd.getSnapshot().getElementFirstRep().getPath()), x, path, showCodeDetails);
}
}
use of org.hl7.fhir.dstu2.model.Annotation in project org.hl7.fhir.core by hapifhir.
the class QuestionnaireBuilder method processDataType.
private void processDataType(StructureDefinition profile, QuestionnaireItemComponent group, ElementDefinition element, String path, TypeRefComponent t, List<QuestionnaireResponse.QuestionnaireResponseItemComponent> answerGroups, List<ElementDefinition> parents) throws FHIRException {
String tc = t.getWorkingCode();
if (tc.equals("code"))
addCodeQuestions(group, element, path, answerGroups);
else if (Utilities.existsInList(tc, "string", "id", "oid", "uuid", "markdown"))
addStringQuestions(group, element, path, answerGroups);
else if (Utilities.existsInList(tc, "uri", "url", "canonical"))
addUriQuestions(group, element, path, answerGroups);
else if (tc.equals("boolean"))
addBooleanQuestions(group, element, path, answerGroups);
else if (tc.equals("decimal"))
addDecimalQuestions(group, element, path, answerGroups);
else if (tc.equals("dateTime") || tc.equals("date"))
addDateTimeQuestions(group, element, path, answerGroups);
else if (tc.equals("instant"))
addInstantQuestions(group, element, path, answerGroups);
else if (tc.equals("time"))
addTimeQuestions(group, element, path, answerGroups);
else if (tc.equals("CodeableConcept"))
addCodeableConceptQuestions(group, element, path, answerGroups);
else if (tc.equals("Period"))
addPeriodQuestions(group, element, path, answerGroups);
else if (tc.equals("Ratio"))
addRatioQuestions(group, element, path, answerGroups);
else if (tc.equals("HumanName"))
addHumanNameQuestions(group, element, path, answerGroups);
else if (tc.equals("Address"))
addAddressQuestions(group, element, path, answerGroups);
else if (tc.equals("ContactPoint"))
addContactPointQuestions(group, element, path, answerGroups);
else if (tc.equals("Identifier"))
addIdentifierQuestions(group, element, path, answerGroups);
else if (tc.equals("integer") || tc.equals("positiveInt") || tc.equals("unsignedInt"))
addIntegerQuestions(group, element, path, answerGroups);
else if (tc.equals("Coding"))
addCodingQuestions(group, element, path, answerGroups);
else if (Utilities.existsInList(tc, "Quantity", "Count", "Age", "Duration", "Distance", "Money"))
addQuantityQuestions(group, element, path, answerGroups);
else if (tc.equals("Money"))
addMoneyQuestions(group, element, path, answerGroups);
else if (tc.equals("Reference"))
addReferenceQuestions(group, element, path, t.getTargetProfile(), answerGroups);
else if (tc.equals("Duration"))
addDurationQuestions(group, element, path, answerGroups);
else if (tc.equals("base64Binary"))
addBinaryQuestions(group, element, path, answerGroups);
else if (tc.equals("Attachment"))
addAttachmentQuestions(group, element, path, answerGroups);
else if (tc.equals("Age"))
addAgeQuestions(group, element, path, answerGroups);
else if (tc.equals("Range"))
addRangeQuestions(group, element, path, answerGroups);
else if (tc.equals("Timing"))
addTimingQuestions(group, element, path, answerGroups);
else if (tc.equals("Annotation"))
addAnnotationQuestions(group, element, path, answerGroups);
else if (tc.equals("SampledData"))
addSampledDataQuestions(group, element, path, answerGroups);
else if (tc.equals("Extension")) {
if (t.hasProfile())
addExtensionQuestions(profile, group, element, path, t.getProfile().get(0).getValue(), answerGroups, parents);
} else if (tc.equals("SampledData"))
addSampledDataQuestions(group, element, path, answerGroups);
else if (!tc.equals("Narrative") && !tc.equals("Resource") && !tc.equals("Meta") && !tc.equals("Signature")) {
StructureDefinition sd = context.fetchTypeDefinition(tc);
if (sd == null)
throw new NotImplementedException("Unhandled Data Type: " + tc + " on element " + element.getPath());
buildGroup(group, sd, sd.getSnapshot().getElementFirstRep(), parents, answerGroups);
}
}
use of org.hl7.fhir.dstu2.model.Annotation in project org.hl7.fhir.core by hapifhir.
the class ProfileDrivenRenderer method renderLeaf.
private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode parent, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints, String path, int indent) throws FHIRException, UnsupportedEncodingException, IOException, EOperationOutcome {
if (ew == null)
return;
Base e = ew.getBase();
if (e instanceof StringType)
x.addText(((StringType) e).getValue());
else if (e instanceof CodeType)
x.addText(((CodeType) e).getValue());
else if (e instanceof IdType)
x.addText(((IdType) e).getValue());
else if (e instanceof Extension)
return;
else if (e instanceof InstantType)
x.addText(((InstantType) e).toHumanDisplay());
else if (e instanceof DateTimeType) {
renderDateTime(x, e);
} else if (e instanceof Base64BinaryType)
x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
else if (e instanceof org.hl7.fhir.r5.model.DateType) {
org.hl7.fhir.r5.model.DateType dt = ((org.hl7.fhir.r5.model.DateType) e);
renderDate(x, dt);
} else if (e instanceof Enumeration) {
Object ev = ((Enumeration<?>) e).getValue();
// todo: look up a display name if there is one
x.addText(ev == null ? "" : ev.toString());
} else if (e instanceof BooleanType) {
x.addText(((BooleanType) e).getValue().toString());
} else if (e instanceof CodeableConcept) {
renderCodeableConcept(x, (CodeableConcept) e, showCodeDetails);
} else if (e instanceof Coding) {
renderCoding(x, (Coding) e, showCodeDetails);
} else if (e instanceof CodeableReference) {
renderCodeableReference(x, (CodeableReference) e, showCodeDetails);
} else if (e instanceof Annotation) {
renderAnnotation(x, (Annotation) e);
} else if (e instanceof Identifier) {
renderIdentifier(x, (Identifier) e);
} else if (e instanceof org.hl7.fhir.r5.model.IntegerType) {
if (((org.hl7.fhir.r5.model.IntegerType) e).hasValue()) {
x.addText(Integer.toString(((org.hl7.fhir.r5.model.IntegerType) e).getValue()));
} else {
x.addText("??");
}
} else if (e instanceof org.hl7.fhir.r5.model.Integer64Type) {
if (((org.hl7.fhir.r5.model.Integer64Type) e).hasValue()) {
x.addText(Long.toString(((org.hl7.fhir.r5.model.Integer64Type) e).getValue()));
} else {
x.addText("??");
}
} else if (e instanceof org.hl7.fhir.r5.model.DecimalType) {
x.addText(((org.hl7.fhir.r5.model.DecimalType) e).getValue().toString());
} else if (e instanceof HumanName) {
renderHumanName(x, (HumanName) e);
} else if (e instanceof SampledData) {
renderSampledData(x, (SampledData) e);
} else if (e instanceof Address) {
renderAddress(x, (Address) e);
} else if (e instanceof ContactPoint) {
renderContactPoint(x, (ContactPoint) e);
} else if (e instanceof Expression) {
renderExpression(x, (Expression) e);
} else if (e instanceof Money) {
renderMoney(x, (Money) e);
} else if (e instanceof ContactDetail) {
ContactDetail cd = (ContactDetail) e;
if (cd.hasName()) {
x.tx(cd.getName() + ": ");
}
boolean first = true;
for (ContactPoint c : cd.getTelecom()) {
if (first)
first = false;
else
x.tx(",");
renderContactPoint(x, c);
}
} else if (e instanceof UriType) {
renderUri(x, (UriType) e, defn.getPath(), rcontext != null && rcontext.getResourceResource() != null ? rcontext.getResourceResource().getId() : null);
} else if (e instanceof Timing) {
renderTiming(x, (Timing) e);
} else if (e instanceof Range) {
renderRange(x, (Range) e);
} else if (e instanceof Quantity) {
renderQuantity(x, (Quantity) e, showCodeDetails);
} else if (e instanceof Ratio) {
renderQuantity(x, ((Ratio) e).getNumerator(), showCodeDetails);
x.tx("/");
renderQuantity(x, ((Ratio) e).getDenominator(), showCodeDetails);
} else if (e instanceof Period) {
Period p = (Period) e;
renderPeriod(x, p);
} else if (e instanceof Reference) {
Reference r = (Reference) e;
if (r.getReference() != null && r.getReference().contains("#")) {
if (containedIds.contains(r.getReference().substring(1))) {
x.ah(r.getReference()).tx("See " + r.getReference());
} else {
// in this case, we render the resource in line
ResourceWrapper rw = null;
for (ResourceWrapper t : res.getContained()) {
if (r.getReference().substring(1).equals(t.getId())) {
rw = t;
}
}
if (rw == null) {
renderReference(res, x, r);
} else {
x.an(rw.getId());
ResourceRenderer rr = RendererFactory.factory(rw, context.copy().setAddGeneratedNarrativeHeader(false));
rr.render(parent.blockquote(), rw);
}
}
} else {
renderReference(res, x, r);
}
} else if (e instanceof Resource) {
return;
} else if (e instanceof DataRequirement) {
DataRequirement p = (DataRequirement) e;
renderDataRequirement(x, p);
} else if (e instanceof PrimitiveType) {
x.tx(((PrimitiveType) e).primitiveValue());
} else if (e instanceof ElementDefinition) {
x.tx("todo-bundle");
} else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta)) {
throw new NotImplementedException("type " + e.getClass().getName() + " not handled - should not be here");
}
}
use of org.hl7.fhir.dstu2.model.Annotation in project fhir-bridge by ehrbase.
the class VorliegendeDiagnoseEvaluationConverter method mapKommentar.
private void mapKommentar(Condition condition, VorliegendeDiagnoseEvaluation vorliegendeDiagnose) {
if (condition.hasNote()) {
StringBuilder kommentar = new StringBuilder();
for (Annotation annotation : condition.getNote()) {
kommentar.append(annotation.getText());
}
vorliegendeDiagnose.setKommentarValue(kommentar.toString());
isEmpty = false;
}
}
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