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Example 46 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeCompositionSectionComponent.

protected void composeCompositionSectionComponent(Complex parent, String parentType, String name, Composition.SectionComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "section", name, element, index);
    if (element.hasTitleElement())
        composeString(t, "Composition", "title", element.getTitleElement(), -1);
    if (element.hasCode())
        composeCodeableConcept(t, "Composition", "code", element.getCode(), -1);
    if (element.hasText())
        composeNarrative(t, "Composition", "text", element.getText(), -1);
    if (element.hasModeElement())
        composeCode(t, "Composition", "mode", element.getModeElement(), -1);
    if (element.hasOrderedBy())
        composeCodeableConcept(t, "Composition", "orderedBy", element.getOrderedBy(), -1);
    for (int i = 0; i < element.getEntry().size(); i++) composeReference(t, "Composition", "entry", element.getEntry().get(i), i);
    if (element.hasEmptyReason())
        composeCodeableConcept(t, "Composition", "emptyReason", element.getEmptyReason(), -1);
    for (int i = 0; i < element.getSection().size(); i++) composeCompositionSectionComponent(t, "Composition", "section", element.getSection().get(i), i);
}
Also used : Complex(org.hl7.fhir.dstu2016may.formats.RdfGenerator.Complex)

Example 47 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeCompositionCompositionAttesterComponent.

protected void composeCompositionCompositionAttesterComponent(Complex parent, String parentType, String name, Composition.CompositionAttesterComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "attester", name, element, index);
    for (int i = 0; i < element.getMode().size(); i++) composeEnum(t, "Composition", "mode", element.getMode().get(i), i);
    if (element.hasTimeElement())
        composeDateTime(t, "Composition", "time", element.getTimeElement(), -1);
    if (element.hasParty())
        composeReference(t, "Composition", "party", element.getParty(), -1);
}
Also used : Complex(org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)

Example 48 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class BundleRenderer method renderDocument.

private boolean renderDocument(XhtmlNode x, ResourceWrapper b, List<BaseWrapper> entries) throws UnsupportedEncodingException, FHIRException, IOException, EOperationOutcome {
    // from the spec:
    // 
    // When the document is presented for human consumption, applications SHOULD present the collated narrative portions in order:
    // * The subject resource Narrative
    // * The Composition resource Narrative
    // * The section.text Narratives
    ResourceWrapper comp = (ResourceWrapper) entries.get(0).getChildByName("resource").getAsResource();
    ResourceWrapper subject = resolveReference(entries, comp.get("subject"));
    if (subject != null) {
        if (subject.hasNarrative()) {
            x.addChildren(subject.getNarrative());
        } else {
            RendererFactory.factory(subject, context).render(x, subject);
        }
    }
    x.hr();
    if (comp.hasNarrative()) {
        x.addChildren(comp.getNarrative());
        x.hr();
    }
    List<BaseWrapper> sections = comp.children("section");
    for (BaseWrapper section : sections) {
        addSection(x, section, 2, false);
    }
    return false;
}
Also used : ResourceWrapper(org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper) BaseWrapper(org.hl7.fhir.r4b.renderers.utils.BaseWrappers.BaseWrapper)

Example 49 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class BundleRenderer method render.

@Override
public boolean render(XhtmlNode x, ResourceWrapper b) throws FHIRFormatError, DefinitionException, IOException, FHIRException, EOperationOutcome {
    List<BaseWrapper> entries = b.children("entry");
    if ("document".equals(b.get("type").primitiveValue())) {
        if (entries.isEmpty() || (entries.get(0).has("resource") && !"Composition".equals(entries.get(0).get("resource").fhirType())))
            throw new FHIRException("Invalid document '" + b.getId() + "' - first entry is not a Composition ('" + entries.get(0).get("resource").fhirType() + "')");
        return renderDocument(x, b, entries);
    } else if ("collection".equals(b.get("type").primitiveValue()) && allEntriesAreHistoryProvenance(entries)) {
    // nothing
    } else {
        XhtmlNode root = new XhtmlNode(NodeType.Element, "div");
        root.para().addText(formatMessage(RENDER_BUNDLE_HEADER_ROOT, b.getId(), b.get("type").primitiveValue()));
        int i = 0;
        for (BaseWrapper be : entries) {
            i++;
            if (be.has("fullUrl")) {
                root.an(makeInternalBundleLink(be.get("fullUrl").primitiveValue()));
            }
            if (be.has("resource") && be.getChildByName("resource").getValues().get(0).has("id")) {
                root.an(be.get("resource").fhirType() + "_" + be.getChildByName("resource").getValues().get(0).get("id").primitiveValue());
            }
            root.hr();
            if (be.has("fullUrl")) {
                root.para().addText(formatMessage(RENDER_BUNDLE_HEADER_ENTRY_URL, Integer.toString(i), be.get("fullUrl").primitiveValue()));
            } else {
                root.para().addText(formatMessage(RENDER_BUNDLE_HEADER_ENTRY, Integer.toString(i)));
            }
            // renderResponse(root, be.getResponse());
            if (be.has("resource")) {
                root.para().addText(formatMessage(RENDER_BUNDLE_RESOURCE, be.get("resource").fhirType()));
                ResourceWrapper rw = be.getChildByName("resource").getAsResource();
                XhtmlNode xn = rw.getNarrative();
                if (xn == null || xn.isEmpty()) {
                    ResourceRenderer rr = RendererFactory.factory(rw, context);
                    try {
                        xn = rr.render(rw);
                    } catch (Exception e) {
                        xn = new XhtmlNode();
                        xn.para().b().tx("Exception generating narrative: " + e.getMessage());
                    }
                }
                root.blockquote().addChildren(xn);
            }
        }
    }
    return false;
}
Also used : ResourceWrapper(org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper) BaseWrapper(org.hl7.fhir.r4b.renderers.utils.BaseWrappers.BaseWrapper) FHIRException(org.hl7.fhir.exceptions.FHIRException) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) UnsupportedEncodingException(java.io.UnsupportedEncodingException) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Example 50 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class BundleRenderer method renderDocument.

private boolean renderDocument(XhtmlNode x, Bundle b) throws UnsupportedEncodingException, FHIRException, IOException, EOperationOutcome {
    // from the spec:
    // 
    // When the document is presented for human consumption, applications SHOULD present the collated narrative portions in order:
    // * The subject resource Narrative
    // * The Composition resource Narrative
    // * The section.text Narratives
    Composition comp = (Composition) b.getEntry().get(0).getResource();
    Resource subject = resolveReference(b, comp.getSubject());
    if (subject != null) {
        XhtmlNode nx = (subject instanceof DomainResource) ? ((DomainResource) subject).getText().getDiv() : null;
        if (nx != null) {
            x.addChildren(nx);
        } else {
            RendererFactory.factory(subject, context).render(x, subject);
        }
    }
    x.hr();
    if (comp.getText().hasDiv()) {
        x.addChildren(comp.getText().getDiv());
        x.hr();
    }
    for (SectionComponent section : comp.getSection()) {
        addSection(x, section, 2, false);
    }
    return false;
}
Also used : Composition(org.hl7.fhir.r4b.model.Composition) DomainResource(org.hl7.fhir.r4b.model.DomainResource) Resource(org.hl7.fhir.r4b.model.Resource) DomainResource(org.hl7.fhir.r4b.model.DomainResource) SectionComponent(org.hl7.fhir.r4b.model.Composition.SectionComponent) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Aggregations

ArrayList (java.util.ArrayList)16 XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)12 Coding (org.hl7.fhir.r4.model.Coding)8 FHIRException (org.hl7.fhir.exceptions.FHIRException)7 CodeableConcept (org.hl7.fhir.r4.model.CodeableConcept)7 Composition (org.hl7.fhir.r4.model.Composition)6 IOException (java.io.IOException)5 Composition (org.hl7.fhir.dstu3.model.Composition)5 Complex (org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)5 Reference (org.hl7.fhir.r4.model.Reference)5 Complex (org.hl7.fhir.r4.utils.formats.Turtle.Complex)5 UnsupportedEncodingException (java.io.UnsupportedEncodingException)4 Complex (org.hl7.fhir.dstu2016may.formats.RdfGenerator.Complex)4 HashMap (java.util.HashMap)3 List (java.util.List)3 Encounter (org.hl7.fhir.dstu3.model.Encounter)3 QuestionnaireResponse (org.hl7.fhir.dstu3.model.QuestionnaireResponse)3 Reference (org.hl7.fhir.dstu3.model.Reference)3 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)3 Map (java.util.Map)2