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Example 51 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeCompositionCompositionRelatesToComponent.

protected void composeCompositionCompositionRelatesToComponent(Complex parent, String parentType, String name, Composition.CompositionRelatesToComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "relatesTo", name, element, index);
    if (element.hasCodeElement())
        composeEnum(t, "Composition", "code", element.getCodeElement(), -1);
    if (element.hasTarget())
        composeType(t, "Composition", "target", element.getTarget(), -1);
}
Also used : Complex(org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)

Example 52 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeComposition.

protected void composeComposition(Complex parent, String parentType, String name, Composition element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeDomainResource(t, "Composition", name, element, index);
    if (element.hasIdentifier())
        composeIdentifier(t, "Composition", "identifier", element.getIdentifier(), -1);
    if (element.hasStatusElement())
        composeEnum(t, "Composition", "status", element.getStatusElement(), -1);
    if (element.hasType())
        composeCodeableConcept(t, "Composition", "type", element.getType(), -1);
    for (int i = 0; i < element.getCategory().size(); i++) composeCodeableConcept(t, "Composition", "category", element.getCategory().get(i), i);
    if (element.hasSubject())
        composeReference(t, "Composition", "subject", element.getSubject(), -1);
    if (element.hasEncounter())
        composeReference(t, "Composition", "encounter", element.getEncounter(), -1);
    if (element.hasDateElement())
        composeDateTime(t, "Composition", "date", element.getDateElement(), -1);
    for (int i = 0; i < element.getAuthor().size(); i++) composeReference(t, "Composition", "author", element.getAuthor().get(i), i);
    if (element.hasTitleElement())
        composeString(t, "Composition", "title", element.getTitleElement(), -1);
    if (element.hasConfidentialityElement())
        composeEnum(t, "Composition", "confidentiality", element.getConfidentialityElement(), -1);
    for (int i = 0; i < element.getAttester().size(); i++) composeCompositionCompositionAttesterComponent(t, "Composition", "attester", element.getAttester().get(i), i);
    if (element.hasCustodian())
        composeReference(t, "Composition", "custodian", element.getCustodian(), -1);
    for (int i = 0; i < element.getRelatesTo().size(); i++) composeCompositionCompositionRelatesToComponent(t, "Composition", "relatesTo", element.getRelatesTo().get(i), i);
    for (int i = 0; i < element.getEvent().size(); i++) composeCompositionCompositionEventComponent(t, "Composition", "event", element.getEvent().get(i), i);
    for (int i = 0; i < element.getSection().size(); i++) composeCompositionSectionComponent(t, "Composition", "section", element.getSection().get(i), i);
}
Also used : Complex(org.hl7.fhir.r4.utils.formats.Turtle.Complex)

Example 53 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class BundleValidator method validateDocumentSubReference.

public void validateDocumentSubReference(List<ValidationMessage> errors, List<Element> entries, Element composition, NodeStack stack, String fullUrl, String id, String title, String parent, boolean repeats, String propName) {
    List<Element> list = new ArrayList<>();
    composition.getNamedChildren(parent, list);
    int i = 1;
    for (Element elem : list) {
        validateDocumentReference(errors, entries, elem, stack.push(elem, i, null, null), fullUrl, id, repeats, propName, title + "." + parent);
        i++;
    }
}
Also used : IndexedElement(org.hl7.fhir.validation.instance.utils.IndexedElement) Element(org.hl7.fhir.r5.elementmodel.Element) ArrayList(java.util.ArrayList)

Example 54 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class BundleValidator method validateSections.

private void validateSections(List<ValidationMessage> errors, List<Element> entries, Element focus, NodeStack stack, String fullUrl, String id) {
    List<Element> sections = new ArrayList<Element>();
    focus.getNamedChildren("section", sections);
    int i = 1;
    for (Element section : sections) {
        NodeStack localStack = stack.push(section, i, null, null);
        // technically R4+, but there won't be matches from before that
        validateDocumentReference(errors, entries, section, stack, fullUrl, id, true, "author", "Section");
        validateDocumentReference(errors, entries, section, stack, fullUrl, id, false, "focus", "Section");
        List<Element> sectionEntries = new ArrayList<Element>();
        section.getNamedChildren(ENTRY, sectionEntries);
        int j = 1;
        for (Element sectionEntry : sectionEntries) {
            NodeStack localStack2 = localStack.push(sectionEntry, j, null, null);
            validateBundleReference(errors, entries, sectionEntry, "Section Entry", localStack2, fullUrl, "Composition", id);
            j++;
        }
        validateSections(errors, entries, section, localStack, fullUrl, id);
        i++;
    }
}
Also used : IndexedElement(org.hl7.fhir.validation.instance.utils.IndexedElement) Element(org.hl7.fhir.r5.elementmodel.Element) ArrayList(java.util.ArrayList) NodeStack(org.hl7.fhir.validation.instance.utils.NodeStack)

Example 55 with Composition

use of org.hl7.fhir.dstu2.model.Composition in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generateDocumentNarrative.

public XhtmlNode generateDocumentNarrative(Bundle feed) {
    /*
     When the document is presented for human consumption, applications must present the collated narrative portions of the following resources in order:
     * The Composition resource
     * The Subject resource
     * Resources referenced in the section.content
     */
    XhtmlNode root = new XhtmlNode(NodeType.Element, "div");
    Composition comp = (Composition) feed.getEntry().get(0).getResource();
    root.getChildNodes().add(comp.getText().getDiv());
    Resource subject = ResourceUtilities.getById(feed, null, comp.getSubject().getReference());
    if (subject != null && subject instanceof DomainResource) {
        root.addTag("hr");
        root.getChildNodes().add(((DomainResource) subject).getText().getDiv());
    }
    List<SectionComponent> sections = comp.getSection();
    renderSections(feed, root, sections, 1);
    return root;
}
Also used : Composition(org.hl7.fhir.dstu2016may.model.Composition) DomainResource(org.hl7.fhir.dstu2016may.model.DomainResource) Resource(org.hl7.fhir.dstu2016may.model.Resource) DomainResource(org.hl7.fhir.dstu2016may.model.DomainResource) SectionComponent(org.hl7.fhir.dstu2016may.model.Composition.SectionComponent) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Aggregations

ArrayList (java.util.ArrayList)16 XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)12 Coding (org.hl7.fhir.r4.model.Coding)8 FHIRException (org.hl7.fhir.exceptions.FHIRException)7 CodeableConcept (org.hl7.fhir.r4.model.CodeableConcept)7 Composition (org.hl7.fhir.r4.model.Composition)6 IOException (java.io.IOException)5 Composition (org.hl7.fhir.dstu3.model.Composition)5 Complex (org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)5 Reference (org.hl7.fhir.r4.model.Reference)5 Complex (org.hl7.fhir.r4.utils.formats.Turtle.Complex)5 UnsupportedEncodingException (java.io.UnsupportedEncodingException)4 Complex (org.hl7.fhir.dstu2016may.formats.RdfGenerator.Complex)4 HashMap (java.util.HashMap)3 List (java.util.List)3 Encounter (org.hl7.fhir.dstu3.model.Encounter)3 QuestionnaireResponse (org.hl7.fhir.dstu3.model.QuestionnaireResponse)3 Reference (org.hl7.fhir.dstu3.model.Reference)3 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)3 Map (java.util.Map)2