use of org.hl7.fhir.dstu2.model.Questionnaire in project org.hl7.fhir.core by hapifhir.
the class ToolingExtensions method addFlyOver.
// public static boolean hasDeprecated(Element c) {
// return findBooleanExtension(c, EXT_DEPRECATED);
// }
public static void addFlyOver(QuestionnaireItemComponent item, String text, String linkId) {
if (!StringUtils.isBlank(text)) {
QuestionnaireItemComponent display = item.addItem();
display.setType(QuestionnaireItemType.DISPLAY);
display.setText(text);
display.setLinkId(linkId);
display.getExtension().add(Factory.newExtension(EXT_CONTROL, Factory.newCodeableConcept("flyover", "http://hl7.org/fhir/questionnaire-item-control", "Fly-over"), true));
}
}
use of org.hl7.fhir.dstu2.model.Questionnaire in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method fetchResourceWithException.
@SuppressWarnings("unchecked")
public <T extends Resource> T fetchResourceWithException(String cls, String uri, CanonicalResource source) throws FHIRException {
if (uri == null) {
return null;
}
if ("StructureDefinition".equals(cls)) {
uri = ProfileUtilities.sdNs(uri, getOverrideVersionNs());
}
synchronized (lock) {
String version = null;
if (uri.contains("|")) {
version = uri.substring(uri.lastIndexOf("|") + 1);
uri = uri.substring(0, uri.lastIndexOf("|"));
}
if (uri.contains("#")) {
uri = uri.substring(0, uri.indexOf("#"));
}
if (cls == null || "Resource".equals(cls)) {
if (structures.has(uri)) {
return (T) structures.get(uri, version);
}
if (guides.has(uri)) {
return (T) guides.get(uri, version);
}
if (capstmts.has(uri)) {
return (T) capstmts.get(uri, version);
}
if (measures.has(uri)) {
return (T) measures.get(uri, version);
}
if (libraries.has(uri)) {
return (T) libraries.get(uri, version);
}
if (valueSets.has(uri)) {
return (T) valueSets.get(uri, version);
}
if (codeSystems.has(uri)) {
return (T) codeSystems.get(uri, version);
}
if (operations.has(uri)) {
return (T) operations.get(uri, version);
}
if (searchParameters.has(uri)) {
return (T) searchParameters.get(uri, version);
}
if (plans.has(uri)) {
return (T) plans.get(uri, version);
}
if (maps.has(uri)) {
return (T) maps.get(uri, version);
}
if (transforms.has(uri)) {
return (T) transforms.get(uri, version);
}
if (questionnaires.has(uri)) {
return (T) questionnaires.get(uri, version);
}
for (Map<String, ResourceProxy> rt : allResourcesById.values()) {
for (ResourceProxy r : rt.values()) {
if (uri.equals(r.getUrl())) {
return (T) r.getResource();
}
}
}
} else if ("ImplementationGuide".equals(cls)) {
return (T) guides.get(uri, version);
} else if ("CapabilityStatement".equals(cls)) {
return (T) capstmts.get(uri, version);
} else if ("Measure".equals(cls)) {
return (T) measures.get(uri, version);
} else if ("Library".equals(cls)) {
return (T) libraries.get(uri, version);
} else if ("StructureDefinition".equals(cls)) {
return (T) structures.get(uri, version);
} else if ("StructureMap".equals(cls)) {
return (T) transforms.get(uri, version);
} else if ("ValueSet".equals(cls)) {
return (T) valueSets.get(uri, version);
} else if ("CodeSystem".equals(cls)) {
return (T) codeSystems.get(uri, version);
} else if ("ConceptMap".equals(cls)) {
return (T) maps.get(uri, version);
} else if ("PlanDefinition".equals(cls)) {
return (T) plans.get(uri, version);
} else if ("OperationDefinition".equals(cls)) {
OperationDefinition od = operations.get(uri, version);
return (T) od;
} else if ("Questionnaire.class".equals(cls)) {
return (T) questionnaires.get(uri, version);
} else if ("SearchParameter.class".equals(cls)) {
SearchParameter res = searchParameters.get(uri, version);
return (T) res;
}
if ("CodeSystem".equals(cls) && codeSystems.has(uri)) {
return (T) codeSystems.get(uri, version);
}
if ("ValueSet".equals(cls) && valueSets.has(uri)) {
return (T) valueSets.get(uri, version);
}
if ("Questionnaire".equals(cls)) {
return (T) questionnaires.get(uri, version);
}
if (cls == null) {
if (uri.matches(Constants.URI_REGEX) && !uri.contains("ValueSet")) {
return null;
}
// it might be a special URL.
if (Utilities.isAbsoluteUrl(uri) || uri.startsWith("ValueSet/")) {
// findTxValueSet(uri);
Resource res = null;
if (res != null) {
return (T) res;
}
}
return null;
}
if (supportedCodeSystems.contains(uri)) {
return null;
}
throw new FHIRException(formatMessage(I18nConstants.NOT_DONE_YET_CANT_FETCH_, uri));
}
}
use of org.hl7.fhir.dstu2.model.Questionnaire in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method registerResourceFromPackage.
public void registerResourceFromPackage(CanonicalResourceProxy r, PackageVersion packageInfo) throws FHIRException {
synchronized (lock) {
if (r.getId() != null) {
Map<String, ResourceProxy> map = allResourcesById.get(r.getType());
if (map == null) {
map = new HashMap<String, ResourceProxy>();
allResourcesById.put(r.getType(), map);
}
if ((packageInfo == null || !packageInfo.isExamplesPackage()) || !map.containsKey(r.getId())) {
map.put(r.getId(), new ResourceProxy(r));
}
}
String url = r.getUrl();
if (!allowLoadingDuplicates && hasResource(r.getType(), url)) {
// spcial workaround for known problems with existing packages
if (Utilities.existsInList(url, "http://hl7.org/fhir/SearchParameter/example")) {
return;
}
throw new DefinitionException(formatMessage(I18nConstants.DUPLICATE_RESOURCE_, url));
}
switch(r.getType()) {
case "StructureDefinition":
if ("1.4.0".equals(version)) {
StructureDefinition sd = (StructureDefinition) r.getResource();
fixOldSD(sd);
}
structures.register(r, packageInfo);
break;
case "ValueSet":
valueSets.register(r, packageInfo);
break;
case "CodeSystem":
codeSystems.register(r, packageInfo);
break;
case "ImplementationGuide":
guides.register(r, packageInfo);
break;
case "CapabilityStatement":
capstmts.register(r, packageInfo);
break;
case "Measure":
measures.register(r, packageInfo);
break;
case "Library":
libraries.register(r, packageInfo);
break;
case "SearchParameter":
searchParameters.register(r, packageInfo);
break;
case "PlanDefinition":
plans.register(r, packageInfo);
break;
case "OperationDefinition":
operations.register(r, packageInfo);
break;
case "Questionnaire":
questionnaires.register(r, packageInfo);
break;
case "ConceptMap":
maps.register(r, packageInfo);
break;
case "StructureMap":
transforms.register(r, packageInfo);
break;
case "NamingSystem":
systems.register(r, packageInfo);
break;
}
}
}
use of org.hl7.fhir.dstu2.model.Questionnaire in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method cacheResourceFromPackage.
public void cacheResourceFromPackage(Resource r, PackageVersion packageInfo) throws FHIRException {
synchronized (lock) {
if (r.getId() != null) {
Map<String, ResourceProxy> map = allResourcesById.get(r.fhirType());
if (map == null) {
map = new HashMap<String, ResourceProxy>();
allResourcesById.put(r.fhirType(), map);
}
if ((packageInfo == null || !packageInfo.isExamplesPackage()) || !map.containsKey(r.getId())) {
map.put(r.getId(), new ResourceProxy(r));
} else {
logger.logDebugMessage(LogCategory.PROGRESS, "Ignore " + r.fhirType() + "/" + r.getId() + " from package " + packageInfo.toString());
}
}
if (r instanceof CodeSystem || r instanceof NamingSystem) {
oidCache.clear();
}
if (r instanceof CanonicalResource) {
CanonicalResource m = (CanonicalResource) r;
String url = m.getUrl();
if (!allowLoadingDuplicates && hasResource(r.getClass(), url)) {
// special workaround for known problems with existing packages
if (Utilities.existsInList(url, "http://hl7.org/fhir/SearchParameter/example")) {
return;
}
throw new DefinitionException(formatMessage(I18nConstants.DUPLICATE_RESOURCE_, url));
}
if (r instanceof StructureDefinition) {
StructureDefinition sd = (StructureDefinition) m;
if ("1.4.0".equals(version)) {
fixOldSD(sd);
}
structures.see(sd, packageInfo);
} else if (r instanceof ValueSet) {
valueSets.see((ValueSet) m, packageInfo);
} else if (r instanceof CodeSystem) {
CodeSystemUtilities.crossLinkCodeSystem((CodeSystem) r);
codeSystems.see((CodeSystem) m, packageInfo);
} else if (r instanceof ImplementationGuide) {
guides.see((ImplementationGuide) m, packageInfo);
} else if (r instanceof CapabilityStatement) {
capstmts.see((CapabilityStatement) m, packageInfo);
} else if (r instanceof Measure) {
measures.see((Measure) m, packageInfo);
} else if (r instanceof Library) {
libraries.see((Library) m, packageInfo);
} else if (r instanceof SearchParameter) {
searchParameters.see((SearchParameter) m, packageInfo);
} else if (r instanceof PlanDefinition) {
plans.see((PlanDefinition) m, packageInfo);
} else if (r instanceof OperationDefinition) {
operations.see((OperationDefinition) m, packageInfo);
} else if (r instanceof Questionnaire) {
questionnaires.see((Questionnaire) m, packageInfo);
} else if (r instanceof ConceptMap) {
maps.see((ConceptMap) m, packageInfo);
} else if (r instanceof StructureMap) {
transforms.see((StructureMap) m, packageInfo);
} else if (r instanceof NamingSystem) {
systems.see((NamingSystem) m, packageInfo);
}
}
}
}
use of org.hl7.fhir.dstu2.model.Questionnaire in project org.hl7.fhir.core by hapifhir.
the class Tester method main.
public static void main(String[] args) throws Exception {
IWorkerContext context = new SimpleWorkerContext.SimpleWorkerContextBuilder().fromPack(Utilities.path("C:\\work\\org.hl7.fhir\\build\\publish", "validation-min.xml.zip"));
int t = 0;
int ok = 0;
for (String f : new File("C:\\work\\org.hl7.fhir\\build\\publish").list()) {
if (f.endsWith(".xml") && !f.endsWith(".canonical.xml") && !f.contains("profile") && !f.contains("questionnaire") && new File("C:\\work\\org.hl7.fhir\\build\\publish\\" + Utilities.changeFileExt(f, ".ttl")).exists()) {
// if (f.equals("account-questionnaire.xml")) {
System.out.print("convert " + f);
// Manager.convert(context, new FileInputStream("C:\\work\\org.hl7.fhir\\build\\publish\\"+f), FhirFormat.XML,
// new FileOutputStream("C:\\work\\org.hl7.fhir\\build\\publish\\"+Utilities.changeFileExt(f, ".mm.json")), FhirFormat.JSON, OutputStyle.PRETTY);
// String src = normalise(TextFile.fileToString("C:\\work\\org.hl7.fhir\\build\\publish\\"+Utilities.changeFileExt(f, ".mm.json")));
// String tgt = normalise(TextFile.fileToString("C:\\work\\org.hl7.fhir\\build\\publish\\"+Utilities.changeFileExt(f, ".json")));
Element e = Manager.parseSingle(context, new FileInputStream("C:\\work\\org.hl7.fhir\\build\\publish\\" + f), FhirFormat.XML);
Manager.compose(context, e, new FileOutputStream("C:\\work\\org.hl7.fhir\\build\\publish\\" + Utilities.changeFileExt(f, ".mm.ttl")), FhirFormat.TURTLE, OutputStyle.PRETTY, null);
Manager.compose(context, e, new FileOutputStream(Utilities.path("[tmp]", "resource.xml")), FhirFormat.XML, OutputStyle.PRETTY, null);
String src = TextFile.fileToString("C:\\work\\org.hl7.fhir\\build\\publish\\" + Utilities.changeFileExt(f, ".mm.ttl"));
String tgt = TextFile.fileToString("C:\\work\\org.hl7.fhir\\build\\publish\\" + Utilities.changeFileExt(f, ".ttl"));
t++;
if (src.equals(tgt)) {
System.out.println(".. ok");
ok++;
} else
System.out.println(".. fail");
}
// }
}
System.out.println("done - " + Integer.toString(t) + " files, " + Integer.toString(ok) + " ok");
}
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