use of org.hl7.fhir.dstu3.model.ConceptMap.OtherElementComponent in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method generate.
public void generate(ConceptMap cm) {
XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
x.addTag("h2").addText(cm.getName() + " (" + cm.getUrl() + ")");
XhtmlNode p = x.addTag("p");
p.addText("Mapping from ");
AddVsRef(((Reference) cm.getSource()).getReference(), p);
p.addText(" to ");
AddVsRef(((Reference) cm.getTarget()).getReference(), p);
p = x.addTag("p");
if (cm.getExperimental())
p.addText(Utilities.capitalize(cm.getStatus().toString()) + " (not intended for production usage). ");
else
p.addText(Utilities.capitalize(cm.getStatus().toString()) + ". ");
p.addText("Published on " + cm.getDateElement().toHumanDisplay() + " by " + cm.getPublisher());
if (!cm.getContact().isEmpty()) {
p.addText(" (");
boolean firsti = true;
for (ConceptMapContactComponent ci : cm.getContact()) {
if (firsti)
firsti = false;
else
p.addText(", ");
if (ci.hasName())
p.addText(ci.getName() + ": ");
boolean first = true;
for (ContactPoint c : ci.getTelecom()) {
if (first)
first = false;
else
p.addText(", ");
addTelecom(p, c);
}
p.addText("; ");
}
p.addText(")");
}
p.addText(". ");
p.addText(cm.getCopyright());
if (!Utilities.noString(cm.getDescription()))
x.addTag("p").addText(cm.getDescription());
x.addTag("br");
if (!cm.getElement().isEmpty()) {
SourceElementComponent cc = cm.getElement().get(0);
String src = cc.getSystem();
boolean comments = false;
boolean ok = cc.getTarget().size() == 1;
Map<String, HashSet<String>> sources = new HashMap<String, HashSet<String>>();
sources.put("code", new HashSet<String>());
Map<String, HashSet<String>> targets = new HashMap<String, HashSet<String>>();
targets.put("code", new HashSet<String>());
if (ok) {
String dst = cc.getTarget().get(0).getSystem();
for (SourceElementComponent ccl : cm.getElement()) {
ok = ok && src.equals(ccl.getSystem()) && ccl.getTarget().size() == 1 && dst.equals(ccl.getTarget().get(0).getSystem()) && ccl.getTarget().get(0).getDependsOn().isEmpty() && ccl.getTarget().get(0).getProduct().isEmpty();
if (ccl.hasSystem())
sources.get("code").add(ccl.getSystem());
for (TargetElementComponent ccm : ccl.getTarget()) {
comments = comments || !Utilities.noString(ccm.getComments());
for (OtherElementComponent d : ccm.getDependsOn()) {
if (!sources.containsKey(d.getElement()))
sources.put(d.getElement(), new HashSet<String>());
sources.get(d.getElement()).add(d.getSystem());
}
if (ccm.hasSystem())
targets.get("code").add(ccm.getSystem());
for (OtherElementComponent d : ccm.getProduct()) {
if (!targets.containsKey(d.getElement()))
targets.put(d.getElement(), new HashSet<String>());
targets.get(d.getElement()).add(d.getSystem());
}
}
}
}
String display;
if (ok) {
// simple
XhtmlNode tbl = x.addTag("table").setAttribute("class", "grid");
XhtmlNode tr = tbl.addTag("tr");
tr.addTag("td").addTag("b").addText("Source Code");
tr.addTag("td").addTag("b").addText("Equivalence");
tr.addTag("td").addTag("b").addText("Destination Code");
if (comments)
tr.addTag("td").addTag("b").addText("Comments");
for (SourceElementComponent ccl : cm.getElement()) {
tr = tbl.addTag("tr");
XhtmlNode td = tr.addTag("td");
td.addText(ccl.getCode());
display = getDisplayForConcept(ccl.getSystem(), ccl.getCode());
if (display != null)
td.addText(" (" + display + ")");
TargetElementComponent ccm = ccl.getTarget().get(0);
tr.addTag("td").addText(!ccm.hasEquivalence() ? "" : ccm.getEquivalence().toCode());
td = tr.addTag("td");
td.addText(ccm.getCode());
display = getDisplayForConcept(ccm.getSystem(), ccm.getCode());
if (display != null)
td.addText(" (" + display + ")");
if (comments)
tr.addTag("td").addText(ccm.getComments());
}
} else {
XhtmlNode tbl = x.addTag("table").setAttribute("class", "grid");
XhtmlNode tr = tbl.addTag("tr");
XhtmlNode td;
tr.addTag("td").setAttribute("colspan", Integer.toString(sources.size())).addTag("b").addText("Source Concept");
tr.addTag("td").addTag("b").addText("Equivalence");
tr.addTag("td").setAttribute("colspan", Integer.toString(targets.size())).addTag("b").addText("Destination Concept");
if (comments)
tr.addTag("td").addTag("b").addText("Comments");
tr = tbl.addTag("tr");
if (sources.get("code").size() == 1)
tr.addTag("td").addTag("b").addText("Code " + sources.get("code").toString() + "");
else
tr.addTag("td").addTag("b").addText("Code");
for (String s : sources.keySet()) {
if (!s.equals("code")) {
if (sources.get(s).size() == 1)
tr.addTag("td").addTag("b").addText(getDescForConcept(s) + " " + sources.get(s).toString());
else
tr.addTag("td").addTag("b").addText(getDescForConcept(s));
}
}
tr.addTag("td");
if (targets.get("code").size() == 1)
tr.addTag("td").addTag("b").addText("Code " + targets.get("code").toString());
else
tr.addTag("td").addTag("b").addText("Code");
for (String s : targets.keySet()) {
if (!s.equals("code")) {
if (targets.get(s).size() == 1)
tr.addTag("td").addTag("b").addText(getDescForConcept(s) + " " + targets.get(s).toString() + "");
else
tr.addTag("td").addTag("b").addText(getDescForConcept(s));
}
}
if (comments)
tr.addTag("td");
for (SourceElementComponent ccl : cm.getElement()) {
tr = tbl.addTag("tr");
td = tr.addTag("td");
if (sources.get("code").size() == 1)
td.addText(ccl.getCode());
else
td.addText(ccl.getSystem() + " / " + ccl.getCode());
display = getDisplayForConcept(ccl.getSystem(), ccl.getCode());
if (display != null)
td.addText(" (" + display + ")");
TargetElementComponent ccm = ccl.getTarget().get(0);
for (String s : sources.keySet()) {
if (!s.equals("code")) {
td = tr.addTag("td");
td.addText(getCode(ccm.getDependsOn(), s, sources.get(s).size() != 1));
display = getDisplay(ccm.getDependsOn(), s);
if (display != null)
td.addText(" (" + display + ")");
}
}
tr.addTag("td").addText(ccm.getEquivalence().toString());
td = tr.addTag("td");
if (targets.get("code").size() == 1)
td.addText(ccm.getCode());
else
td.addText(ccm.getSystem() + " / " + ccm.getCode());
display = getDisplayForConcept(ccm.getSystem(), ccm.getCode());
if (display != null)
td.addText(" (" + display + ")");
for (String s : targets.keySet()) {
if (!s.equals("code")) {
td = tr.addTag("td");
td.addText(getCode(ccm.getProduct(), s, targets.get(s).size() != 1));
display = getDisplay(ccm.getProduct(), s);
if (display != null)
td.addText(" (" + display + ")");
}
}
if (comments)
tr.addTag("td").addText(ccm.getComments());
}
}
}
inject(cm, x, NarrativeStatus.GENERATED);
}
use of org.hl7.fhir.dstu3.model.ConceptMap.OtherElementComponent in project org.hl7.fhir.core by hapifhir.
the class MappingSheetParser method readConceptMap.
private void readConceptMap(ConceptMap cm) throws FHIRException {
for (ConceptMapGroupComponent g : cm.getGroup()) {
for (SourceElementComponent e : g.getElement()) {
if (e.hasId() && e.getTarget().size() == 1 && e.hasExtension(ToolingExtensions.EXT_MAPPING_TYPE)) {
TargetElementComponent t = e.getTargetFirstRep();
MappingRow row = new MappingRow();
row.sequence = e.getId();
row.identifier = e.getCode();
row.name = e.getExtensionString(ToolingExtensions.EXT_MAPPING_NAME);
row.dataType = e.getExtensionString(ToolingExtensions.EXT_MAPPING_TYPE);
row.cardinality = e.getExtensionString(ToolingExtensions.EXT_MAPPING_CARD);
if (e.getTargetFirstRep().getEquivalence() == ConceptMapEquivalence.UNMATCHED) {
row.attribute = "N/A";
} else {
OtherElementComponent dep = getDependency(t, "http://hl7.org/fhirpath");
if (dep != null)
row.condition = dep.getValue();
row.attribute = t.getCode();
row.type = t.getExtensionString(ToolingExtensions.EXT_MAPPING_TGTTYPE);
row.minMax = t.getExtensionString(ToolingExtensions.EXT_MAPPING_TGTCARD);
row.dtMapping = t.getExtensionString("http://hl7.org/fhir/StructureDefinition/ConceptMap-type-mapping");
row.vocabMapping = t.getExtensionString("http://hl7.org/fhir/StructureDefinition/ConceptMap-vocab-mapping");
if (t.getProduct().size() > 0) {
row.derived = t.getProductFirstRep().getProperty();
row.derivedMapping = t.getProductFirstRep().getValue();
}
}
row.comments = t.getComment();
rows.add(row);
}
}
}
}
use of org.hl7.fhir.dstu3.model.ConceptMap.OtherElementComponent in project org.hl7.fhir.core by hapifhir.
the class ConceptMapRenderer method render.
public boolean render(XhtmlNode x, ConceptMap cm) throws FHIRFormatError, DefinitionException, IOException {
x.h2().addText(cm.getName() + " (" + cm.getUrl() + ")");
XhtmlNode p = x.para();
p.tx("Mapping from ");
if (cm.hasSource())
AddVsRef(cm.getSource().primitiveValue(), p);
else
p.tx("(not specified)");
p.tx(" to ");
if (cm.hasTarget())
AddVsRef(cm.getTarget().primitiveValue(), p);
else
p.tx("(not specified)");
p = x.para();
if (cm.getExperimental())
p.addText(Utilities.capitalize(cm.getStatus().toString()) + " (not intended for production usage). ");
else
p.addText(Utilities.capitalize(cm.getStatus().toString()) + ". ");
p.tx("Published on " + (cm.hasDate() ? cm.getDateElement().toHumanDisplay() : "?ngen-10?") + " by " + cm.getPublisher());
if (!cm.getContact().isEmpty()) {
p.tx(" (");
boolean firsti = true;
for (ContactDetail ci : cm.getContact()) {
if (firsti)
firsti = false;
else
p.tx(", ");
if (ci.hasName())
p.addText(ci.getName() + ": ");
boolean first = true;
for (ContactPoint c : ci.getTelecom()) {
if (first)
first = false;
else
p.tx(", ");
addTelecom(p, c);
}
}
p.tx(")");
}
p.tx(". ");
p.addText(cm.getCopyright());
if (!Utilities.noString(cm.getDescription()))
addMarkdown(x, cm.getDescription());
x.br();
CodeSystem cs = getContext().getWorker().fetchCodeSystem("http://hl7.org/fhir/concept-map-relationship");
if (cs == null)
cs = getContext().getWorker().fetchCodeSystem("http://hl7.org/fhir/concept-map-equivalence");
String eqpath = cs == null ? null : cs.getUserString("path");
for (ConceptMapGroupComponent grp : cm.getGroup()) {
String src = grp.getSource();
boolean comment = false;
boolean ok = true;
Map<String, HashSet<String>> sources = new HashMap<String, HashSet<String>>();
Map<String, HashSet<String>> targets = new HashMap<String, HashSet<String>>();
sources.put("code", new HashSet<String>());
targets.put("code", new HashSet<String>());
SourceElementComponent cc = grp.getElement().get(0);
String dst = grp.getTarget();
sources.get("code").add(grp.getSource());
targets.get("code").add(grp.getTarget());
for (SourceElementComponent ccl : grp.getElement()) {
ok = ok && ccl.getTarget().size() == 1 && ccl.getTarget().get(0).getDependsOn().isEmpty() && ccl.getTarget().get(0).getProduct().isEmpty();
for (TargetElementComponent ccm : ccl.getTarget()) {
comment = comment || !Utilities.noString(ccm.getComment());
for (OtherElementComponent d : ccm.getDependsOn()) {
if (!sources.containsKey(d.getProperty()))
sources.put(d.getProperty(), new HashSet<String>());
sources.get(d.getProperty()).add(d.getSystem());
}
for (OtherElementComponent d : ccm.getProduct()) {
if (!targets.containsKey(d.getProperty()))
targets.put(d.getProperty(), new HashSet<String>());
targets.get(d.getProperty()).add(d.getSystem());
}
}
}
String display;
if (ok) {
// simple
XhtmlNode tbl = x.table("grid");
XhtmlNode tr = tbl.tr();
tr.td().b().tx("Source Code");
tr.td().b().tx("Relationship");
tr.td().b().tx("Destination Code");
if (comment)
tr.td().b().tx("Comment");
for (SourceElementComponent ccl : grp.getElement()) {
tr = tbl.tr();
XhtmlNode td = tr.td();
td.addText(ccl.getCode());
display = getDisplayForConcept(systemFromCanonical(grp.getSource()), versionFromCanonical(grp.getSource()), ccl.getCode());
if (display != null && !isSameCodeAndDisplay(ccl.getCode(), display))
td.tx(" (" + display + ")");
TargetElementComponent ccm = ccl.getTarget().get(0);
if (!ccm.hasEquivalence())
tr.td().tx(":" + "(" + ConceptMapEquivalence.NULL.toCode() + ")");
else {
String code = ccm.getEquivalenceElement().primitiveValue();
tr.td().ah(eqpath + "#" + code).tx(presentEquivalenceCode(code));
}
td = tr.td();
td.addText(ccm.getCode());
display = getDisplayForConcept(systemFromCanonical(grp.getTarget()), versionFromCanonical(grp.getTarget()), ccm.getCode());
if (display != null && !isSameCodeAndDisplay(ccm.getCode(), display))
td.tx(" (" + display + ")");
if (comment)
tr.td().addText(ccm.getComment());
addUnmapped(tbl, grp);
}
} else {
boolean hasRelationships = false;
for (int si = 0; si < grp.getElement().size(); si++) {
SourceElementComponent ccl = grp.getElement().get(si);
for (int ti = 0; ti < ccl.getTarget().size(); ti++) {
TargetElementComponent ccm = ccl.getTarget().get(ti);
if (ccm.hasEquivalence()) {
hasRelationships = true;
}
}
}
XhtmlNode tbl = x.table("grid");
XhtmlNode tr = tbl.tr();
XhtmlNode td;
tr.td().colspan(Integer.toString(1 + sources.size())).b().tx("Source Concept Details");
if (hasRelationships) {
tr.td().b().tx("Relationship");
}
tr.td().colspan(Integer.toString(1 + targets.size())).b().tx("Destination Concept Details");
if (comment) {
tr.td().b().tx("Comment");
}
tr = tbl.tr();
if (sources.get("code").size() == 1) {
String url = sources.get("code").iterator().next();
renderCSDetailsLink(tr, url, true);
} else
tr.td().b().tx("Code");
for (String s : sources.keySet()) {
if (!s.equals("code")) {
if (sources.get(s).size() == 1) {
String url = sources.get(s).iterator().next();
renderCSDetailsLink(tr, url, false);
} else
tr.td().b().addText(getDescForConcept(s));
}
}
if (hasRelationships) {
tr.td();
}
if (targets.get("code").size() == 1) {
String url = targets.get("code").iterator().next();
renderCSDetailsLink(tr, url, true);
} else
tr.td().b().tx("Code");
for (String s : targets.keySet()) {
if (!s.equals("code")) {
if (targets.get(s).size() == 1) {
String url = targets.get(s).iterator().next();
renderCSDetailsLink(tr, url, false);
} else
tr.td().b().addText(getDescForConcept(s));
}
}
if (comment)
tr.td();
for (int si = 0; si < grp.getElement().size(); si++) {
SourceElementComponent ccl = grp.getElement().get(si);
boolean slast = si == grp.getElement().size() - 1;
boolean first = true;
if (false) {
tr = tbl.tr();
td = tr.td().style("border-right-width: 0px");
if (!first)
td.style("border-top-style: none");
else
td.style("border-bottom-style: none");
if (sources.get("code").size() == 1)
td.addText(ccl.getCode());
else
td.addText(grp.getSource() + " / " + ccl.getCode());
display = getDisplayForConcept(systemFromCanonical(grp.getSource()), versionFromCanonical(grp.getSource()), ccl.getCode());
tr.td().style("border-left-width: 0px").tx(display == null ? "" : display);
tr.td().colspan("4").style("background-color: #efefef").tx("(not mapped)");
} else {
for (int ti = 0; ti < ccl.getTarget().size(); ti++) {
TargetElementComponent ccm = ccl.getTarget().get(ti);
boolean last = ti == ccl.getTarget().size() - 1;
tr = tbl.tr();
td = tr.td().style("border-right-width: 0px");
if (!first && !last)
td.style("border-top-style: none; border-bottom-style: none");
else if (!first)
td.style("border-top-style: none");
else if (!last)
td.style("border-bottom-style: none");
if (first) {
if (sources.get("code").size() == 1)
td.addText(ccl.getCode());
else
td.addText(grp.getSource() + " / " + ccl.getCode());
display = ccl.hasDisplay() ? ccl.getDisplay() : getDisplayForConcept(systemFromCanonical(grp.getSource()), versionFromCanonical(grp.getSource()), ccl.getCode());
td = tr.td();
if (!last)
td.style("border-left-width: 0px; border-bottom-style: none");
else
td.style("border-left-width: 0px");
td.tx(display == null ? "" : display);
} else {
// for display
td = tr.td();
if (!last)
td.style("border-left-width: 0px; border-top-style: none; border-bottom-style: none");
else
td.style("border-top-style: none; border-left-width: 0px");
}
for (String s : sources.keySet()) {
if (!s.equals("code")) {
td = tr.td();
if (first) {
td.addText(getValue(ccm.getDependsOn(), s, sources.get(s).size() != 1));
display = getDisplay(ccm.getDependsOn(), s);
if (display != null)
td.tx(" (" + display + ")");
}
}
}
first = false;
if (hasRelationships) {
if (!ccm.hasEquivalence())
tr.td();
else {
String code = ccm.getEquivalenceElement().toString();
tr.td().ah(eqpath + "#" + code).tx(presentEquivalenceCode(code));
}
}
td = tr.td().style("border-right-width: 0px");
if (targets.get("code").size() == 1)
td.addText(ccm.getCode());
else
td.addText(grp.getTarget() + " / " + ccm.getCode());
display = ccm.hasDisplay() ? ccm.getDisplay() : getDisplayForConcept(systemFromCanonical(grp.getTarget()), versionFromCanonical(grp.getTarget()), ccm.getCode());
tr.td().style("border-left-width: 0px").tx(display == null ? "" : display);
for (String s : targets.keySet()) {
if (!s.equals("code")) {
td = tr.td();
td.addText(getValue(ccm.getProduct(), s, targets.get(s).size() != 1));
display = getDisplay(ccm.getProduct(), s);
if (display != null)
td.tx(" (" + display + ")");
}
}
if (comment)
tr.td().addText(ccm.getComment());
}
}
addUnmapped(tbl, grp);
}
}
}
return true;
}
use of org.hl7.fhir.dstu3.model.ConceptMap.OtherElementComponent in project org.hl7.fhir.core by hapifhir.
the class ConceptMapRenderer method render.
public boolean render(XhtmlNode x, ConceptMap cm) throws FHIRFormatError, DefinitionException, IOException {
x.h2().addText(cm.getName() + " (" + cm.getUrl() + ")");
XhtmlNode p = x.para();
p.tx("Mapping from ");
if (cm.hasSource())
AddVsRef(cm.getSource().primitiveValue(), p);
else
p.tx("(not specified)");
p.tx(" to ");
if (cm.hasTarget())
AddVsRef(cm.getTarget().primitiveValue(), p);
else
p.tx("(not specified)");
p = x.para();
if (cm.getExperimental())
p.addText(Utilities.capitalize(cm.getStatus().toString()) + " (not intended for production usage). ");
else
p.addText(Utilities.capitalize(cm.getStatus().toString()) + ". ");
p.tx("Published on " + (cm.hasDate() ? display(cm.getDateElement()) : "?ngen-10?") + " by " + cm.getPublisher());
if (!cm.getContact().isEmpty()) {
p.tx(" (");
boolean firsti = true;
for (ContactDetail ci : cm.getContact()) {
if (firsti)
firsti = false;
else
p.tx(", ");
if (ci.hasName())
p.addText(ci.getName() + ": ");
boolean first = true;
for (ContactPoint c : ci.getTelecom()) {
if (first)
first = false;
else
p.tx(", ");
addTelecom(p, c);
}
}
p.tx(")");
}
p.tx(". ");
p.addText(cm.getCopyright());
if (!Utilities.noString(cm.getDescription()))
addMarkdown(x, cm.getDescription());
x.br();
CodeSystem cs = getContext().getWorker().fetchCodeSystem("http://hl7.org/fhir/concept-map-relationship");
if (cs == null)
cs = getContext().getWorker().fetchCodeSystem("http://hl7.org/fhir/concept-map-equivalence");
String eqpath = cs == null ? null : cs.getUserString("path");
for (ConceptMapGroupComponent grp : cm.getGroup()) {
String src = grp.getSource();
boolean comment = false;
boolean ok = true;
Map<String, HashSet<String>> sources = new HashMap<String, HashSet<String>>();
Map<String, HashSet<String>> targets = new HashMap<String, HashSet<String>>();
sources.put("code", new HashSet<String>());
targets.put("code", new HashSet<String>());
SourceElementComponent cc = grp.getElement().get(0);
String dst = grp.getTarget();
sources.get("code").add(grp.getSource());
targets.get("code").add(grp.getTarget());
for (SourceElementComponent ccl : grp.getElement()) {
ok = ok && ccl.getTarget().size() == 1 && ccl.getTarget().get(0).getDependsOn().isEmpty() && ccl.getTarget().get(0).getProduct().isEmpty();
for (TargetElementComponent ccm : ccl.getTarget()) {
comment = comment || !Utilities.noString(ccm.getComment());
for (OtherElementComponent d : ccm.getDependsOn()) {
if (!sources.containsKey(d.getProperty()))
sources.put(d.getProperty(), new HashSet<String>());
sources.get(d.getProperty()).add(d.getSystem());
}
for (OtherElementComponent d : ccm.getProduct()) {
if (!targets.containsKey(d.getProperty()))
targets.put(d.getProperty(), new HashSet<String>());
targets.get(d.getProperty()).add(d.getSystem());
}
}
}
String display;
if (ok) {
// simple
XhtmlNode tbl = x.table("grid");
XhtmlNode tr = tbl.tr();
tr.td().b().tx("Source Code");
tr.td().b().tx("Relationship");
tr.td().b().tx("Destination Code");
if (comment)
tr.td().b().tx("Comment");
tr = tbl.tr();
XhtmlNode td = tr.td().colspan(comment ? "4" : "3");
td.tx("Mapping from ");
if (grp.hasSource()) {
renderCanonical(cm, td, grp.getSource());
} else {
td.code("unspecified code system");
}
td.tx(" to ");
if (grp.hasTarget()) {
renderCanonical(cm, td, grp.getTarget());
} else {
td.code("unspecified code system");
}
for (SourceElementComponent ccl : grp.getElement()) {
tr = tbl.tr();
td = tr.td();
td.addText(ccl.getCode());
display = ccl.hasDisplay() ? ccl.getDisplay() : getDisplayForConcept(systemFromCanonical(grp.getSource()), versionFromCanonical(grp.getSource()), ccl.getCode());
if (display != null && !isSameCodeAndDisplay(ccl.getCode(), display))
td.tx(" (" + display + ")");
TargetElementComponent ccm = ccl.getTarget().get(0);
if (!ccm.hasRelationship())
tr.td().tx(":" + "(" + ConceptMapRelationship.EQUIVALENT.toCode() + ")");
else {
if (ccm.getRelationshipElement().hasExtension(ToolingExtensions.EXT_OLD_CONCEPTMAP_EQUIVALENCE)) {
String code = ToolingExtensions.readStringExtension(ccm.getRelationshipElement(), ToolingExtensions.EXT_OLD_CONCEPTMAP_EQUIVALENCE);
tr.td().ah(eqpath + "#" + code).tx(presentEquivalenceCode(code));
} else {
tr.td().ah(eqpath + "#" + ccm.getRelationship().toCode()).tx(presentRelationshipCode(ccm.getRelationship().toCode()));
}
}
td = tr.td();
td.addText(ccm.getCode());
display = ccm.hasDisplay() ? ccm.getDisplay() : getDisplayForConcept(systemFromCanonical(grp.getTarget()), versionFromCanonical(grp.getTarget()), ccm.getCode());
if (display != null && !isSameCodeAndDisplay(ccm.getCode(), display))
td.tx(" (" + display + ")");
if (comment)
tr.td().addText(ccm.getComment());
addUnmapped(tbl, grp);
}
} else {
boolean hasRelationships = false;
for (int si = 0; si < grp.getElement().size(); si++) {
SourceElementComponent ccl = grp.getElement().get(si);
for (int ti = 0; ti < ccl.getTarget().size(); ti++) {
TargetElementComponent ccm = ccl.getTarget().get(ti);
if (ccm.hasRelationship()) {
hasRelationships = true;
}
}
}
XhtmlNode tbl = x.table("grid");
XhtmlNode tr = tbl.tr();
XhtmlNode td;
tr.td().colspan(Integer.toString(1 + sources.size())).b().tx("Source Concept Details");
if (hasRelationships) {
tr.td().b().tx("Relationship");
}
tr.td().colspan(Integer.toString(1 + targets.size())).b().tx("Destination Concept Details");
if (comment) {
tr.td().b().tx("Comment");
}
tr = tbl.tr();
if (sources.get("code").size() == 1) {
String url = sources.get("code").iterator().next();
renderCSDetailsLink(tr, url, true);
} else
tr.td().b().tx("Code");
for (String s : sources.keySet()) {
if (!s.equals("code")) {
if (sources.get(s).size() == 1) {
String url = sources.get(s).iterator().next();
renderCSDetailsLink(tr, url, false);
} else
tr.td().b().addText(getDescForConcept(s));
}
}
if (hasRelationships) {
tr.td();
}
if (targets.get("code").size() == 1) {
String url = targets.get("code").iterator().next();
renderCSDetailsLink(tr, url, true);
} else
tr.td().b().tx("Code");
for (String s : targets.keySet()) {
if (!s.equals("code")) {
if (targets.get(s).size() == 1) {
String url = targets.get(s).iterator().next();
renderCSDetailsLink(tr, url, false);
} else
tr.td().b().addText(getDescForConcept(s));
}
}
if (comment)
tr.td();
for (int si = 0; si < grp.getElement().size(); si++) {
SourceElementComponent ccl = grp.getElement().get(si);
boolean slast = si == grp.getElement().size() - 1;
boolean first = true;
if (ccl.hasNoMap() && ccl.getNoMap()) {
tr = tbl.tr();
td = tr.td().style("border-right-width: 0px");
if (!first)
td.style("border-top-style: none");
else
td.style("border-bottom-style: none");
if (sources.get("code").size() == 1)
td.addText(ccl.getCode());
else
td.addText(grp.getSource() + " / " + ccl.getCode());
display = getDisplayForConcept(systemFromCanonical(grp.getSource()), versionFromCanonical(grp.getSource()), ccl.getCode());
tr.td().style("border-left-width: 0px").tx(display == null ? "" : display);
tr.td().colspan("4").style("background-color: #efefef").tx("(not mapped)");
} else {
for (int ti = 0; ti < ccl.getTarget().size(); ti++) {
TargetElementComponent ccm = ccl.getTarget().get(ti);
boolean last = ti == ccl.getTarget().size() - 1;
tr = tbl.tr();
td = tr.td().style("border-right-width: 0px");
if (!first && !last)
td.style("border-top-style: none; border-bottom-style: none");
else if (!first)
td.style("border-top-style: none");
else if (!last)
td.style("border-bottom-style: none");
if (first) {
if (sources.get("code").size() == 1)
td.addText(ccl.getCode());
else
td.addText(grp.getSource() + " / " + ccl.getCode());
display = ccl.hasDisplay() ? ccl.getDisplay() : getDisplayForConcept(systemFromCanonical(grp.getSource()), versionFromCanonical(grp.getSource()), ccl.getCode());
td = tr.td();
if (!last)
td.style("border-left-width: 0px; border-bottom-style: none");
else
td.style("border-left-width: 0px");
td.tx(display == null ? "" : display);
} else {
// for display
td = tr.td();
if (!last)
td.style("border-left-width: 0px; border-top-style: none; border-bottom-style: none");
else
td.style("border-top-style: none; border-left-width: 0px");
}
for (String s : sources.keySet()) {
if (!s.equals("code")) {
td = tr.td();
if (first) {
td.addText(getValue(ccm.getDependsOn(), s, sources.get(s).size() != 1));
display = getDisplay(ccm.getDependsOn(), s);
if (display != null)
td.tx(" (" + display + ")");
}
}
}
first = false;
if (hasRelationships) {
if (!ccm.hasRelationship())
tr.td();
else {
if (ccm.getRelationshipElement().hasExtension(ToolingExtensions.EXT_OLD_CONCEPTMAP_EQUIVALENCE)) {
String code = ToolingExtensions.readStringExtension(ccm.getRelationshipElement(), ToolingExtensions.EXT_OLD_CONCEPTMAP_EQUIVALENCE);
tr.td().ah(eqpath + "#" + code).tx(presentEquivalenceCode(code));
} else {
tr.td().ah(eqpath + "#" + ccm.getRelationship().toCode()).tx(presentRelationshipCode(ccm.getRelationship().toCode()));
}
}
}
td = tr.td().style("border-right-width: 0px");
if (targets.get("code").size() == 1)
td.addText(ccm.getCode());
else
td.addText(grp.getTarget() + " / " + ccm.getCode());
display = ccm.hasDisplay() ? ccm.getDisplay() : getDisplayForConcept(systemFromCanonical(grp.getTarget()), versionFromCanonical(grp.getTarget()), ccm.getCode());
tr.td().style("border-left-width: 0px").tx(display == null ? "" : display);
for (String s : targets.keySet()) {
if (!s.equals("code")) {
td = tr.td();
td.addText(getValue(ccm.getProduct(), s, targets.get(s).size() != 1));
display = getDisplay(ccm.getProduct(), s);
if (display != null)
td.tx(" (" + display + ")");
}
}
if (comment)
tr.td().addText(ccm.getComment());
}
}
addUnmapped(tbl, grp);
}
}
}
return true;
}
use of org.hl7.fhir.dstu3.model.ConceptMap.OtherElementComponent in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method generate.
public boolean generate(ResourceContext rcontext, ConceptMap cm) throws FHIRFormatError, DefinitionException, IOException {
XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
x.h2().addText(cm.getName() + " (" + cm.getUrl() + ")");
XhtmlNode p = x.para();
if (cm.hasSource() || cm.hasTarget())
p.tx("Mapping from ");
if (!cm.hasSource())
p.tx("(unspecified)");
else
AddVsRef(rcontext, cm.getSource() instanceof Reference ? ((Reference) cm.getSource()).getReference() : ((UriType) cm.getSource()).asStringValue(), p);
p.tx(" to ");
if (!cm.hasTarget())
p.tx("(unspecified)");
else
AddVsRef(rcontext, cm.getTarget() instanceof Reference ? ((Reference) cm.getTarget()).getReference() : ((UriType) cm.getTarget()).asStringValue(), p);
p = x.para();
if (cm.getExperimental())
p.addText(Utilities.capitalize(cm.getStatus().toString()) + " (not intended for production usage). ");
else
p.addText(Utilities.capitalize(cm.getStatus().toString()) + ". ");
p.tx("Published on " + (cm.hasDate() ? cm.getDateElement().toHumanDisplay() : "??") + " by " + cm.getPublisher());
if (!cm.getContact().isEmpty()) {
p.tx(" (");
boolean firsti = true;
for (ContactDetail ci : cm.getContact()) {
if (firsti)
firsti = false;
else
p.tx(", ");
if (ci.hasName())
p.addText(ci.getName() + ": ");
boolean first = true;
for (ContactPoint c : ci.getTelecom()) {
if (first)
first = false;
else
p.tx(", ");
addTelecom(p, c);
}
}
p.tx(")");
}
p.tx(". ");
p.addText(cm.getCopyright());
if (!Utilities.noString(cm.getDescription()))
addMarkdown(x, cm.getDescription());
x.br();
for (ConceptMapGroupComponent grp : cm.getGroup()) {
String src = grp.getSource();
boolean comment = false;
boolean ok = true;
Map<String, HashSet<String>> sources = new HashMap<String, HashSet<String>>();
Map<String, HashSet<String>> targets = new HashMap<String, HashSet<String>>();
sources.put("code", new HashSet<String>());
targets.put("code", new HashSet<String>());
SourceElementComponent cc = grp.getElement().get(0);
String dst = grp.getTarget();
sources.get("code").add(grp.getSource());
targets.get("code").add(grp.getTarget());
for (SourceElementComponent ccl : grp.getElement()) {
ok = ok && ccl.getTarget().size() == 1 && ccl.getTarget().get(0).getDependsOn().isEmpty() && ccl.getTarget().get(0).getProduct().isEmpty();
for (TargetElementComponent ccm : ccl.getTarget()) {
comment = comment || !Utilities.noString(ccm.getComment());
for (OtherElementComponent d : ccm.getDependsOn()) {
if (!sources.containsKey(d.getProperty()))
sources.put(d.getProperty(), new HashSet<String>());
sources.get(d.getProperty()).add(d.getSystem());
}
for (OtherElementComponent d : ccm.getProduct()) {
if (!targets.containsKey(d.getProperty()))
targets.put(d.getProperty(), new HashSet<String>());
targets.get(d.getProperty()).add(d.getSystem());
}
}
}
String display;
if (ok) {
// simple
XhtmlNode tbl = x.table("grid");
XhtmlNode tr = tbl.tr();
tr.td().b().tx("Source Code");
tr.td().b().tx("Equivalence");
tr.td().b().tx("Destination Code");
if (comment)
tr.td().b().tx("Comment");
for (SourceElementComponent ccl : grp.getElement()) {
tr = tbl.tr();
XhtmlNode td = tr.td();
td.addText(ccl.getCode());
display = getDisplayForConcept(grp.getSource(), ccl.getCode());
if (display != null)
td.tx(" (" + display + ")");
TargetElementComponent ccm = ccl.getTarget().get(0);
tr.td().addText(!ccm.hasEquivalence() ? "" : ccm.getEquivalence().toCode());
td = tr.td();
td.addText(ccm.getCode());
display = getDisplayForConcept(grp.getTarget(), ccm.getCode());
if (display != null)
td.tx(" (" + display + ")");
if (comment)
tr.td().addText(ccm.getComment());
}
} else {
XhtmlNode tbl = x.table("grid");
XhtmlNode tr = tbl.tr();
XhtmlNode td;
tr.td().colspan(Integer.toString(sources.size())).b().tx("Source Concept");
tr.td().b().tx("Equivalence");
tr.td().colspan(Integer.toString(targets.size())).b().tx("Destination Concept");
if (comment)
tr.td().b().tx("Comment");
tr = tbl.tr();
if (sources.get("code").size() == 1)
tr.td().b().tx("Code " + sources.get("code").toString() + "");
else
tr.td().b().tx("Code");
for (String s : sources.keySet()) {
if (!s.equals("code")) {
if (sources.get(s).size() == 1)
tr.td().b().addText(getDescForConcept(s) + " " + sources.get(s).toString());
else
tr.td().b().addText(getDescForConcept(s));
}
}
tr.td();
if (targets.get("code").size() == 1)
tr.td().b().tx("Code " + targets.get("code").toString());
else
tr.td().b().tx("Code");
for (String s : targets.keySet()) {
if (!s.equals("code")) {
if (targets.get(s).size() == 1)
tr.td().b().addText(getDescForConcept(s) + " " + targets.get(s).toString() + "");
else
tr.td().b().addText(getDescForConcept(s));
}
}
if (comment)
tr.td();
for (SourceElementComponent ccl : grp.getElement()) {
tr = tbl.tr();
td = tr.td();
if (sources.get("code").size() == 1)
td.addText(ccl.getCode());
else
td.addText(grp.getSource() + " / " + ccl.getCode());
display = getDisplayForConcept(grp.getSource(), ccl.getCode());
if (display != null)
td.tx(" (" + display + ")");
TargetElementComponent ccm = ccl.getTarget().get(0);
for (String s : sources.keySet()) {
if (!s.equals("code")) {
td = tr.td();
td.addText(getCode(ccm.getDependsOn(), s, sources.get(s).size() != 1));
display = getDisplay(ccm.getDependsOn(), s);
if (display != null)
td.tx(" (" + display + ")");
}
}
if (!ccm.hasEquivalence())
tr.td().tx(":" + "(" + ConceptMapEquivalence.EQUIVALENT.toCode() + ")");
else
tr.td().tx(":" + ccm.getEquivalence().toCode());
td = tr.td();
if (targets.get("code").size() == 1)
td.addText(ccm.getCode());
else
td.addText(grp.getTarget() + " / " + ccm.getCode());
display = getDisplayForConcept(grp.getTarget(), ccm.getCode());
if (display != null)
td.tx(" (" + display + ")");
for (String s : targets.keySet()) {
if (!s.equals("code")) {
td = tr.td();
td.addText(getCode(ccm.getProduct(), s, targets.get(s).size() != 1));
display = getDisplay(ccm.getProduct(), s);
if (display != null)
td.tx(" (" + display + ")");
}
}
if (comment)
tr.td().addText(ccm.getComment());
}
}
}
inject(cm, x, NarrativeStatus.GENERATED);
return true;
}
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