Search in sources :

Example 66 with Coverage

use of org.hl7.fhir.dstu3.model.Coverage in project beneficiary-fhir-data by CMSgov.

the class TransformerUtils method createBundle.

/**
 * Create a bundle from the entire search result
 *
 * @param resources a list of {@link ExplanationOfBenefit}s, {@link Coverage}s, or {@link
 *     Patient}s, all of which will be added to the bundle
 * @param paging contains the {@link LinkBuilder} information to add to the bundle
 * @param transactionTime date for the bundle
 * @return Returns a {@link Bundle} of either {@link ExplanationOfBenefit}s, {@link Coverage}s, or
 *     {@link Patient}s, which may contain multiple matching resources, or may also be empty.
 */
public static Bundle createBundle(List<IBaseResource> resources, LinkBuilder paging, Instant transactionTime) {
    Bundle bundle = new Bundle();
    TransformerUtils.addResourcesToBundle(bundle, resources);
    paging.addLinks(bundle);
    bundle.setTotalElement(paging.isPagingRequested() ? new UnsignedIntType() : new UnsignedIntType(resources.size()));
    /*
     * Dev Note: the Bundle's lastUpdated timestamp is the known last update time for the whole
     * database. Because the filterManager's tracking of this timestamp is lazily updated for
     * performance reason, the resources of the bundle may be after the filter manager's version of
     * the timestamp.
     */
    Instant maxBundleDate = resources.stream().map(r -> r.getMeta().getLastUpdated().toInstant()).filter(Objects::nonNull).max(Instant::compareTo).orElse(transactionTime);
    bundle.getMeta().setLastUpdated(transactionTime.isAfter(maxBundleDate) ? Date.from(transactionTime) : Date.from(maxBundleDate));
    return bundle;
}
Also used : Arrays(java.util.Arrays) CarrierClaimColumn(gov.cms.bfd.model.rif.CarrierClaimColumn) CcwCodebookInterface(gov.cms.bfd.model.codebook.model.CcwCodebookInterface) Identifier(org.hl7.fhir.dstu3.model.Identifier) Constants(ca.uhn.fhir.rest.api.Constants) Coding(org.hl7.fhir.dstu3.model.Coding) InpatientClaim(gov.cms.bfd.model.rif.InpatientClaim) CodeableConcept(org.hl7.fhir.dstu3.model.CodeableConcept) DomainResource(org.hl7.fhir.dstu3.model.DomainResource) IBaseExtension(org.hl7.fhir.instance.model.api.IBaseExtension) StringUtils(org.apache.commons.lang3.StringUtils) SNFClaimColumn(gov.cms.bfd.model.rif.SNFClaimColumn) BigDecimal(java.math.BigDecimal) SNFClaimLine(gov.cms.bfd.model.rif.SNFClaimLine) IBaseResource(org.hl7.fhir.instance.model.api.IBaseResource) CarrierClaimLine(gov.cms.bfd.model.rif.CarrierClaimLine) Map(java.util.Map) ProcedureComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.ProcedureComponent) CcwCodebookMissingVariable(gov.cms.bfd.model.codebook.data.CcwCodebookMissingVariable) TemporalPrecisionEnum(ca.uhn.fhir.model.api.TemporalPrecisionEnum) Value(gov.cms.bfd.model.codebook.model.Value) Diagnosis(gov.cms.bfd.server.war.commons.Diagnosis) OutpatientClaim(gov.cms.bfd.model.rif.OutpatientClaim) Coverage(org.hl7.fhir.dstu3.model.Coverage) IdDt(ca.uhn.fhir.model.primitive.IdDt) ExplanationOfBenefit(org.hl7.fhir.dstu3.model.ExplanationOfBenefit) MedicareSegment(gov.cms.bfd.server.war.commons.MedicareSegment) Reference(org.hl7.fhir.dstu3.model.Reference) DiagnosisComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.DiagnosisComponent) InpatientClaimColumn(gov.cms.bfd.model.rif.InpatientClaimColumn) Set(java.util.Set) StandardCharsets(java.nio.charset.StandardCharsets) ZoneId(java.time.ZoneId) UncheckedIOException(java.io.UncheckedIOException) ReferralRequestStatus(org.hl7.fhir.dstu3.model.ReferralRequest.ReferralRequestStatus) Stream(java.util.stream.Stream) ReferralRequestRequesterComponent(org.hl7.fhir.dstu3.model.ReferralRequest.ReferralRequestRequesterComponent) CarrierClaim(gov.cms.bfd.model.rif.CarrierClaim) HHAClaimLine(gov.cms.bfd.model.rif.HHAClaimLine) Money(org.hl7.fhir.dstu3.model.Money) ReferralRequest(org.hl7.fhir.dstu3.model.ReferralRequest) BenefitComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.BenefitComponent) IAnyResource(org.hl7.fhir.instance.model.api.IAnyResource) ArrayList(java.util.ArrayList) Strings(com.google.common.base.Strings) CCWUtils(gov.cms.bfd.server.war.commons.CCWUtils) RequestDetails(ca.uhn.fhir.rest.api.server.RequestDetails) ResourceType(org.hl7.fhir.dstu3.model.ResourceType) CcwCodebookVariable(gov.cms.bfd.model.codebook.data.CcwCodebookVariable) Period(org.hl7.fhir.dstu3.model.Period) CurrencyIdentifier(gov.cms.bfd.server.war.stu3.providers.BeneficiaryTransformer.CurrencyIdentifier) CCWProcedure(gov.cms.bfd.server.war.commons.CCWProcedure) OffsetLinkBuilder(gov.cms.bfd.server.war.commons.OffsetLinkBuilder) Practitioner(org.hl7.fhir.dstu3.model.Practitioner) MetricRegistry(com.codahale.metrics.MetricRegistry) LinkBuilder(gov.cms.bfd.server.war.commons.LinkBuilder) BadCodeMonkeyException(gov.cms.bfd.sharedutils.exceptions.BadCodeMonkeyException) SimpleQuantity(org.hl7.fhir.dstu3.model.SimpleQuantity) IOException(java.io.IOException) Observation(org.hl7.fhir.dstu3.model.Observation) InputStreamReader(java.io.InputStreamReader) FDADrugDataUtilityApp(gov.cms.bfd.server.war.FDADrugDataUtilityApp) SupportingInformationComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.SupportingInformationComponent) DMEClaimColumn(gov.cms.bfd.model.rif.DMEClaimColumn) Patient(org.hl7.fhir.dstu3.model.Patient) MDC(org.slf4j.MDC) BufferedReader(java.io.BufferedReader) IBaseHasExtensions(org.hl7.fhir.instance.model.api.IBaseHasExtensions) Bundle(org.hl7.fhir.dstu3.model.Bundle) Date(java.util.Date) BundleEntryComponent(org.hl7.fhir.dstu3.model.Bundle.BundleEntryComponent) LoggerFactory(org.slf4j.LoggerFactory) Extension(org.hl7.fhir.dstu3.model.Extension) ClaimCareteamrole(org.hl7.fhir.dstu3.model.codesystems.ClaimCareteamrole) Organization(org.hl7.fhir.dstu3.model.Organization) SNFClaim(gov.cms.bfd.model.rif.SNFClaim) HHAClaimColumn(gov.cms.bfd.model.rif.HHAClaimColumn) BenefitBalanceComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.BenefitBalanceComponent) Collection(java.util.Collection) ItemComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.ItemComponent) Instant(java.time.Instant) Collectors(java.util.stream.Collectors) DiagnosisLabel(gov.cms.bfd.server.war.commons.Diagnosis.DiagnosisLabel) Quantity(org.hl7.fhir.dstu3.model.Quantity) UnsignedIntType(org.hl7.fhir.dstu3.model.UnsignedIntType) Objects(java.util.Objects) Beneficiary(gov.cms.bfd.model.rif.Beneficiary) List(java.util.List) CareTeamComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.CareTeamComponent) TransformerConstants(gov.cms.bfd.server.war.commons.TransformerConstants) LocalDate(java.time.LocalDate) Optional(java.util.Optional) UnsupportedEncodingException(java.io.UnsupportedEncodingException) DateType(org.hl7.fhir.dstu3.model.DateType) OutpatientClaimColumn(gov.cms.bfd.model.rif.OutpatientClaimColumn) HospiceClaimLine(gov.cms.bfd.model.rif.HospiceClaimLine) DataFormatException(ca.uhn.fhir.parser.DataFormatException) HashMap(java.util.HashMap) InpatientClaimLine(gov.cms.bfd.model.rif.InpatientClaimLine) OutpatientClaimLine(gov.cms.bfd.model.rif.OutpatientClaimLine) HashSet(java.util.HashSet) ExplanationOfBenefitStatus(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.ExplanationOfBenefitStatus) HHAClaim(gov.cms.bfd.model.rif.HHAClaim) ObservationStatus(org.hl7.fhir.dstu3.model.Observation.ObservationStatus) InvalidRifValueException(gov.cms.bfd.model.rif.parse.InvalidRifValueException) DMEClaim(gov.cms.bfd.model.rif.DMEClaim) DMEClaimLine(gov.cms.bfd.model.rif.DMEClaimLine) LinkedList(java.util.LinkedList) NoSuchElementException(java.util.NoSuchElementException) AdjudicationComponent(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.AdjudicationComponent) BenefitCategory(org.hl7.fhir.dstu3.model.codesystems.BenefitCategory) Logger(org.slf4j.Logger) Resource(org.hl7.fhir.dstu3.model.Resource) Variable(gov.cms.bfd.model.codebook.model.Variable) HospiceClaim(gov.cms.bfd.model.rif.HospiceClaim) Consumer(java.util.function.Consumer) URLEncoder(java.net.URLEncoder) IdentifierType(gov.cms.bfd.server.war.commons.IdentifierType) InputStream(java.io.InputStream) Bundle(org.hl7.fhir.dstu3.model.Bundle) Instant(java.time.Instant) Objects(java.util.Objects) UnsignedIntType(org.hl7.fhir.dstu3.model.UnsignedIntType)

Example 67 with Coverage

use of org.hl7.fhir.dstu3.model.Coverage in project beneficiary-fhir-data by CMSgov.

the class HHAClaimTransformerV2Test method shouldReferenceCoverageInInsurance.

/**
 * Insurance
 */
@Test
public void shouldReferenceCoverageInInsurance() {
    // Only one insurance object
    assertEquals(1, eob.getInsurance().size());
    InsuranceComponent insurance = eob.getInsuranceFirstRep();
    InsuranceComponent compare = new InsuranceComponent().setCoverage(new Reference().setReference("Coverage/part-b-567834"));
    assertTrue(compare.equalsDeep(insurance));
}
Also used : Reference(org.hl7.fhir.r4.model.Reference) InsuranceComponent(org.hl7.fhir.r4.model.ExplanationOfBenefit.InsuranceComponent) Test(org.junit.jupiter.api.Test)

Example 68 with Coverage

use of org.hl7.fhir.dstu3.model.Coverage in project beneficiary-fhir-data by CMSgov.

the class CoverageTransformerV2Test method verifyCoverageContract.

private static void verifyCoverageContract(String partId) {
    assertEquals(2, coverage.getContract().size());
    Coverage compare = new Coverage();
    compare.addContract().setId("contract1");
    compare.addContract().setReference("Coverage/" + partId + "-contract1");
    assertTrue(compare.getContract().get(0).equalsDeep(coverage.getContract().get(0)));
    assertTrue(compare.getContract().get(1).equalsDeep(coverage.getContract().get(1)));
}
Also used : Coverage(org.hl7.fhir.r4.model.Coverage)

Example 69 with Coverage

use of org.hl7.fhir.dstu3.model.Coverage in project beneficiary-fhir-data by CMSgov.

the class CoverageResourceProviderIT method searchByExistingBeneficiary.

/**
 * Verifies that {@link
 * gov.cms.bfd.server.war.stu3.providers.CoverageResourceProvider#searchByBeneficiary(ca.uhn.fhir.rest.param.ReferenceParam)}
 * works as expected for a {@link Beneficiary} that does exist in the DB.
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void searchByExistingBeneficiary() throws FHIRException {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClient();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    Bundle searchResults = fhirClient.search().forResource(Coverage.class).where(Coverage.BENEFICIARY.hasId(TransformerUtils.buildPatientId(beneficiary))).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    assertEquals(MedicareSegment.values().length, searchResults.getTotal());
    /*
     * Verify that no paging links exist within the bundle.
     */
    assertNull(searchResults.getLink(Constants.LINK_FIRST));
    assertNull(searchResults.getLink(Constants.LINK_NEXT));
    assertNull(searchResults.getLink(Constants.LINK_PREVIOUS));
    assertNull(searchResults.getLink(Constants.LINK_LAST));
    /*
     * Verify that each of the expected Coverages (one for every
     * MedicareSegment) is present and looks correct.
     */
    Coverage partACoverageFromSearchResult = searchResults.getEntry().stream().filter(e -> e.getResource() instanceof Coverage).map(e -> (Coverage) e.getResource()).filter(c -> TransformerConstants.COVERAGE_PLAN_PART_A.equals(c.getGrouping().getSubPlan())).findFirst().get();
    CoverageTransformerTest.assertPartAMatches(beneficiary, partACoverageFromSearchResult);
    Coverage partBCoverageFromSearchResult = searchResults.getEntry().stream().filter(e -> e.getResource() instanceof Coverage).map(e -> (Coverage) e.getResource()).filter(c -> TransformerConstants.COVERAGE_PLAN_PART_B.equals(c.getGrouping().getSubPlan())).findFirst().get();
    CoverageTransformerTest.assertPartBMatches(beneficiary, partBCoverageFromSearchResult);
    Coverage partDCoverageFromSearchResult = searchResults.getEntry().stream().filter(e -> e.getResource() instanceof Coverage).map(e -> (Coverage) e.getResource()).filter(c -> TransformerConstants.COVERAGE_PLAN_PART_D.equals(c.getGrouping().getSubPlan())).findFirst().get();
    CoverageTransformerTest.assertPartDMatches(beneficiary, partDCoverageFromSearchResult);
}
Also used : Assertions.assertNotNull(org.junit.jupiter.api.Assertions.assertNotNull) Arrays(java.util.Arrays) Bundle(org.hl7.fhir.dstu3.model.Bundle) Date(java.util.Date) Assertions.assertNull(org.junit.jupiter.api.Assertions.assertNull) Constants(ca.uhn.fhir.rest.api.Constants) LoggerFactory(org.slf4j.LoggerFactory) PipelineTestUtils(gov.cms.bfd.pipeline.sharedutils.PipelineTestUtils) DateRangeParam(ca.uhn.fhir.rest.param.DateRangeParam) BeforeAll(org.junit.jupiter.api.BeforeAll) Assertions.assertEquals(org.junit.jupiter.api.Assertions.assertEquals) IGenericClient(ca.uhn.fhir.rest.client.api.IGenericClient) ResourceNotFoundException(ca.uhn.fhir.rest.server.exceptions.ResourceNotFoundException) StaticRifResourceGroup(gov.cms.bfd.model.rif.samples.StaticRifResourceGroup) ServerTestUtils(gov.cms.bfd.server.war.ServerTestUtils) Coverage(org.hl7.fhir.dstu3.model.Coverage) Logger(org.slf4j.Logger) MedicareSegment(gov.cms.bfd.server.war.commons.MedicareSegment) InvalidRequestException(ca.uhn.fhir.rest.server.exceptions.InvalidRequestException) Instant(java.time.Instant) Test(org.junit.jupiter.api.Test) Beneficiary(gov.cms.bfd.model.rif.Beneficiary) List(java.util.List) AfterEach(org.junit.jupiter.api.AfterEach) TransformerConstants(gov.cms.bfd.server.war.commons.TransformerConstants) FHIRException(org.hl7.fhir.exceptions.FHIRException) IGenericClient(ca.uhn.fhir.rest.client.api.IGenericClient) Bundle(org.hl7.fhir.dstu3.model.Bundle) Coverage(org.hl7.fhir.dstu3.model.Coverage) Beneficiary(gov.cms.bfd.model.rif.Beneficiary) Test(org.junit.jupiter.api.Test)

Example 70 with Coverage

use of org.hl7.fhir.dstu3.model.Coverage in project beneficiary-fhir-data by CMSgov.

the class CoverageTransformerTest method transformSampleARecord.

/**
 * Verifies that {@link
 * gov.cms.bfd.server.war.stu3.providers.CoverageTransformer#transform(MedicareSegment,
 * Beneficiary)} works as expected when run against the {@link StaticRifResource#SAMPLE_A_CARRIER}
 * {@link Beneficiary}.
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void transformSampleARecord() throws FHIRException {
    List<Object> parsedRecords = ServerTestUtils.parseData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    Beneficiary beneficiary = parsedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    beneficiary.setLastUpdated(Instant.now());
    Coverage partACoverage = CoverageTransformer.transform(new MetricRegistry(), MedicareSegment.PART_A, beneficiary);
    assertPartAMatches(beneficiary, partACoverage);
    Coverage partBCoverage = CoverageTransformer.transform(new MetricRegistry(), MedicareSegment.PART_B, beneficiary);
    assertPartBMatches(beneficiary, partBCoverage);
    Coverage partCCoverage = CoverageTransformer.transform(new MetricRegistry(), MedicareSegment.PART_C, beneficiary);
    assertPartCMatches(beneficiary, partCCoverage);
    Coverage partDCoverage = CoverageTransformer.transform(new MetricRegistry(), MedicareSegment.PART_D, beneficiary);
    assertPartDMatches(beneficiary, partDCoverage);
    // Test with null lastUpdated
    beneficiary.setLastUpdated(Optional.empty());
    Coverage partACoverageNullLastUpdated = CoverageTransformer.transform(new MetricRegistry(), MedicareSegment.PART_A, beneficiary);
    assertPartAMatches(beneficiary, partACoverageNullLastUpdated);
}
Also used : Coverage(org.hl7.fhir.dstu3.model.Coverage) Assertions.assertNotNull(org.junit.jupiter.api.Assertions.assertNotNull) Arrays(java.util.Arrays) MetricRegistry(com.codahale.metrics.MetricRegistry) StaticRifResource(gov.cms.bfd.model.rif.samples.StaticRifResource) MedicareSegment(gov.cms.bfd.server.war.commons.MedicareSegment) CoverageStatus(org.hl7.fhir.dstu3.model.Coverage.CoverageStatus) Instant(java.time.Instant) Test(org.junit.jupiter.api.Test) Beneficiary(gov.cms.bfd.model.rif.Beneficiary) List(java.util.List) TransformerConstants(gov.cms.bfd.server.war.commons.TransformerConstants) CcwCodebookVariable(gov.cms.bfd.model.codebook.data.CcwCodebookVariable) Optional(java.util.Optional) FHIRException(org.hl7.fhir.exceptions.FHIRException) Assertions.assertEquals(org.junit.jupiter.api.Assertions.assertEquals) StaticRifResourceGroup(gov.cms.bfd.model.rif.samples.StaticRifResourceGroup) ServerTestUtils(gov.cms.bfd.server.war.ServerTestUtils) MetricRegistry(com.codahale.metrics.MetricRegistry) Coverage(org.hl7.fhir.dstu3.model.Coverage) Beneficiary(gov.cms.bfd.model.rif.Beneficiary) Test(org.junit.jupiter.api.Test)

Aggregations

Test (org.junit.jupiter.api.Test)31 Coverage (org.hl7.fhir.r4.model.Coverage)28 Beneficiary (gov.cms.bfd.model.rif.Beneficiary)16 BundleEntryComponent (org.hl7.fhir.r4.model.Bundle.BundleEntryComponent)16 MedicareSegment (gov.cms.bfd.server.war.commons.MedicareSegment)15 Coverage (org.hl7.fhir.dstu3.model.Coverage)15 Reference (org.hl7.fhir.r4.model.Reference)14 TransformerConstants (gov.cms.bfd.server.war.commons.TransformerConstants)13 Arrays (java.util.Arrays)13 Instant (java.time.Instant)12 List (java.util.List)12 Date (java.util.Date)11 Complex (org.hl7.fhir.dstu2016may.formats.RdfGenerator.Complex)11 Constants (ca.uhn.fhir.rest.api.Constants)10 Timer (com.codahale.metrics.Timer)10 Bundle (org.hl7.fhir.r4.model.Bundle)10 Complex (org.hl7.fhir.r4.utils.formats.Turtle.Complex)10 CcwCodebookVariable (gov.cms.bfd.model.codebook.data.CcwCodebookVariable)9 Patient (org.hl7.fhir.r4.model.Patient)9 Assertions.assertEquals (org.junit.jupiter.api.Assertions.assertEquals)9