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Example 26 with PrimitiveType

use of org.hl7.fhir.dstu3.model.PrimitiveType in project org.hl7.fhir.core by hapifhir.

the class ObjectConverter method convertElement.

private Element convertElement(Property property, Base base) throws FHIRException {
    if (base == null)
        return null;
    String tn = base.fhirType();
    StructureDefinition sd = context.fetchResource(StructureDefinition.class, ProfileUtilities.sdNs(tn, context.getOverrideVersionNs()));
    if (sd == null)
        throw new FHIRException("Unable to find definition for type " + tn);
    Element res = new Element(property.getName(), property);
    if (sd.getKind() == StructureDefinitionKind.PRIMITIVETYPE)
        res.setValue(((PrimitiveType) base).asStringValue());
    List<ElementDefinition> children = profileUtilities.getChildMap(sd, sd.getSnapshot().getElementFirstRep());
    for (ElementDefinition child : children) {
        String n = tail(child.getPath());
        if (sd.getKind() != StructureDefinitionKind.PRIMITIVETYPE || !"value".equals(n)) {
            Base[] values = base.getProperty(n.hashCode(), n, false);
            if (values != null)
                for (Base value : values) {
                    res.getChildren().add(convertElement(new Property(context, child, sd), value));
                }
        }
    }
    return res;
}
Also used : StructureDefinition(org.hl7.fhir.r4b.model.StructureDefinition) NamedElement(org.hl7.fhir.r4b.elementmodel.ParserBase.NamedElement) PrimitiveType(org.hl7.fhir.r4b.model.PrimitiveType) ElementDefinition(org.hl7.fhir.r4b.model.ElementDefinition) FHIRException(org.hl7.fhir.exceptions.FHIRException) Base(org.hl7.fhir.r4b.model.Base)

Example 27 with PrimitiveType

use of org.hl7.fhir.dstu3.model.PrimitiveType in project org.hl7.fhir.core by hapifhir.

the class FHIRToolingClient method operateType.

public <T extends Resource> Parameters operateType(Class<T> resourceClass, String name, Parameters params) {
    boolean complex = false;
    for (ParametersParameterComponent p : params.getParameter()) complex = complex || !(p.getValue() instanceof PrimitiveType);
    String ps = "";
    try {
        if (!complex)
            for (ParametersParameterComponent p : params.getParameter()) if (p.getValue() instanceof PrimitiveType)
                ps += p.getName() + "=" + Utilities.encodeUri(((PrimitiveType) p.getValue()).asStringValue()) + "&";
        ResourceRequest<T> result;
        URI url = resourceAddress.resolveOperationURLFromClass(resourceClass, name, ps);
        if (complex) {
            byte[] body = ByteUtils.resourceToByteArray(params, false, isJson(getPreferredResourceFormat()));
            result = client.issuePostRequest(url, body, getPreferredResourceFormat(), generateHeaders(), "POST " + resourceClass.getName() + "/$" + name, TIMEOUT_OPERATION_LONG);
        } else {
            result = client.issueGetResourceRequest(url, getPreferredResourceFormat(), generateHeaders(), "GET " + resourceClass.getName() + "/$" + name, TIMEOUT_OPERATION_LONG);
        }
        if (result.isUnsuccessfulRequest()) {
            throw new EFhirClientException("Server returned error code " + result.getHttpStatus(), (OperationOutcome) result.getPayload());
        }
        if (result.getPayload() instanceof Parameters) {
            return (Parameters) result.getPayload();
        } else {
            Parameters p_out = new Parameters();
            p_out.addParameter().setName("return").setResource(result.getPayload());
            return p_out;
        }
    } catch (Exception e) {
        handleException("Error performing tx5 operation '" + name + ": " + e.getMessage() + "' (parameters = \"" + ps + "\")", e);
    }
    return null;
}
Also used : URI(java.net.URI) MalformedURLException(java.net.MalformedURLException) URISyntaxException(java.net.URISyntaxException) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) ParametersParameterComponent(org.hl7.fhir.r4b.model.Parameters.ParametersParameterComponent)

Example 28 with PrimitiveType

use of org.hl7.fhir.dstu3.model.PrimitiveType in project org.hl7.fhir.core by hapifhir.

the class StructureMapUtilities method describeTransformCCorC.

@SuppressWarnings("rawtypes")
private String describeTransformCCorC(StructureMapGroupRuleTargetComponent tgt) throws FHIRException {
    if (tgt.getParameter().size() < 2)
        return null;
    DataType p1 = tgt.getParameter().get(0).getValue();
    DataType p2 = tgt.getParameter().get(1).getValue();
    if (p1 instanceof IdType || p2 instanceof IdType)
        return null;
    if (!(p1 instanceof PrimitiveType) || !(p2 instanceof PrimitiveType))
        return null;
    String uri = ((PrimitiveType) p1).asStringValue();
    String code = ((PrimitiveType) p2).asStringValue();
    if (Utilities.noString(uri))
        throw new FHIRException("Describe Transform, but the uri is blank");
    if (Utilities.noString(code))
        throw new FHIRException("Describe Transform, but the code is blank");
    Coding c = buildCoding(uri, code);
    return TerminologyRenderer.describeSystem(c.getSystem()) + "#" + c.getCode() + (c.hasDisplay() ? "(" + c.getDisplay() + ")" : "");
}
Also used : FHIRException(org.hl7.fhir.exceptions.FHIRException)

Example 29 with PrimitiveType

use of org.hl7.fhir.dstu3.model.PrimitiveType in project org.hl7.fhir.core by hapifhir.

the class PrimitiveType method equalsShallow.

@Override
public boolean equalsShallow(Base obj) {
    if (obj == null) {
        return false;
    }
    if (!(obj.getClass() == getClass())) {
        return false;
    }
    PrimitiveType<?> o = (PrimitiveType<?>) obj;
    EqualsBuilder b = new EqualsBuilder();
    b.append(getValue(), o.getValue());
    return b.isEquals();
}
Also used : IPrimitiveType(org.hl7.fhir.instance.model.api.IPrimitiveType) EqualsBuilder(org.apache.commons.lang3.builder.EqualsBuilder)

Example 30 with PrimitiveType

use of org.hl7.fhir.dstu3.model.PrimitiveType in project org.hl7.fhir.core by hapifhir.

the class ProfileDrivenRenderer method displayLeaf.

private boolean displayLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, String name, boolean showCodeDetails, boolean allowLinks) throws FHIRException, UnsupportedEncodingException, IOException {
    if (ew == null)
        return false;
    Base e = ew.getBase();
    if (e == null)
        return false;
    Map<String, String> displayHints = readDisplayHints(defn);
    if (name.endsWith("[x]"))
        name = name.substring(0, name.length() - 3);
    if (!showCodeDetails && e instanceof PrimitiveType && isDefault(displayHints, ((PrimitiveType) e)))
        return false;
    if (e instanceof StringType) {
        x.addText(name + ": " + ((StringType) e).getValue());
        return true;
    } else if (e instanceof CodeType) {
        x.addText(name + ": " + ((CodeType) e).getValue());
        return true;
    } else if (e instanceof IdType) {
        x.addText(name + ": " + ((IdType) e).getValue());
        return true;
    } else if (e instanceof UriType) {
        if (Utilities.isAbsoluteUrlLinkable(((UriType) e).getValue()) && allowLinks) {
            x.tx(name + ": ");
            x.ah(((UriType) e).getValue()).addText(((UriType) e).getValue());
        } else {
            x.addText(name + ": " + ((UriType) e).getValue());
        }
        return true;
    } else if (e instanceof DateTimeType) {
        x.addText(name + ": " + ((DateTimeType) e).toHumanDisplay());
        return true;
    } else if (e instanceof InstantType) {
        x.addText(name + ": " + ((InstantType) e).toHumanDisplay());
        return true;
    } else if (e instanceof Extension) {
        // x.tx("Extensions: todo");
        return false;
    } else if (e instanceof org.hl7.fhir.r4b.model.DateType) {
        x.addText(name + ": " + ((org.hl7.fhir.r4b.model.DateType) e).toHumanDisplay());
        return true;
    } else if (e instanceof Enumeration) {
        // todo: look up a display name if there is one
        x.addText(((Enumeration<?>) e).getValue().toString());
        return true;
    } else if (e instanceof BooleanType) {
        if (((BooleanType) e).hasValue()) {
            x.addText(name);
            x.addText(": ");
            x.addText(((BooleanType) e).getValueAsString());
            return true;
        }
    } else if (e instanceof CodeableReference) {
        if (((CodeableReference) e).hasReference()) {
            Reference r = ((CodeableReference) e).getReference();
            renderReference(res, x, r, allowLinks);
        } else {
            renderCodeableConcept(x, ((CodeableReference) e).getConcept(), showCodeDetails);
        }
        return true;
    } else if (e instanceof CodeableConcept) {
        renderCodeableConcept(x, (CodeableConcept) e, showCodeDetails);
        return true;
    } else if (e instanceof Coding) {
        renderCoding(x, (Coding) e, showCodeDetails);
        return true;
    } else if (e instanceof Annotation) {
        renderAnnotation(x, (Annotation) e, showCodeDetails);
        return true;
    } else if (e instanceof org.hl7.fhir.r4b.model.IntegerType) {
        x.addText(Integer.toString(((org.hl7.fhir.r4b.model.IntegerType) e).getValue()));
        return true;
    } else if (e instanceof org.hl7.fhir.r4b.model.DecimalType) {
        x.addText(((org.hl7.fhir.r4b.model.DecimalType) e).getValue().toString());
        return true;
    } else if (e instanceof Identifier) {
        renderIdentifier(x, (Identifier) e);
        return true;
    } else if (e instanceof HumanName) {
        renderHumanName(x, (HumanName) e);
        return true;
    } else if (e instanceof SampledData) {
        renderSampledData(x, (SampledData) e);
        return true;
    } else if (e instanceof Address) {
        renderAddress(x, (Address) e);
        return true;
    } else if (e instanceof ContactPoint) {
        if (allowLinks) {
            renderContactPoint(x, (ContactPoint) e);
        } else {
            displayContactPoint(x, (ContactPoint) e);
        }
        return true;
    } else if (e instanceof Timing) {
        renderTiming(x, (Timing) e);
        return true;
    } else if (e instanceof Quantity) {
        renderQuantity(x, (Quantity) e, showCodeDetails);
        return true;
    } else if (e instanceof Ratio) {
        renderQuantity(x, ((Ratio) e).getNumerator(), showCodeDetails);
        x.tx("/");
        renderQuantity(x, ((Ratio) e).getDenominator(), showCodeDetails);
        return true;
    } else if (e instanceof Period) {
        Period p = (Period) e;
        x.addText(name + ": ");
        x.addText(!p.hasStart() ? "?ngen-2?" : p.getStartElement().toHumanDisplay());
        x.tx(" --> ");
        x.addText(!p.hasEnd() ? "(ongoing)" : p.getEndElement().toHumanDisplay());
        return true;
    } else if (e instanceof Reference) {
        Reference r = (Reference) e;
        if (r.hasDisplayElement())
            x.addText(r.getDisplay());
        else if (r.hasReferenceElement()) {
            ResourceWithReference tr = resolveReference(res, r.getReference());
            // getDisplayForReference(tr.getReference()));
            x.addText(tr == null ? r.getReference() : "?ngen-3");
        } else
            x.tx("?ngen-4?");
        return true;
    } else if (e instanceof Narrative) {
        return false;
    } else if (e instanceof Resource) {
        return false;
    } else if (e instanceof ContactDetail) {
        ContactDetail cd = (ContactDetail) e;
        if (cd.hasName()) {
            x.tx(cd.getName() + ": ");
        }
        boolean first = true;
        for (ContactPoint c : cd.getTelecom()) {
            if (first)
                first = false;
            else
                x.tx(",");
            if (allowLinks) {
                renderContactPoint(x, c);
            } else {
                displayContactPoint(x, c);
            }
        }
        return true;
    } else if (e instanceof Range) {
        return false;
    } else if (e instanceof Meta) {
        return false;
    } else if (e instanceof Dosage) {
        return false;
    } else if (e instanceof Signature) {
        return false;
    } else if (e instanceof UsageContext) {
        return false;
    } else if (e instanceof RelatedArtifact) {
        return false;
    } else if (e instanceof ElementDefinition) {
        return false;
    } else if (e instanceof Base64BinaryType) {
        return false;
    } else if (!(e instanceof Attachment))
        throw new NotImplementedException("type " + e.getClass().getName() + " not handled yet");
    return false;
}
Also used : Meta(org.hl7.fhir.r4b.model.Meta) Address(org.hl7.fhir.r4b.model.Address) StringType(org.hl7.fhir.r4b.model.StringType) Attachment(org.hl7.fhir.r4b.model.Attachment) Dosage(org.hl7.fhir.r4b.model.Dosage) Identifier(org.hl7.fhir.r4b.model.Identifier) Coding(org.hl7.fhir.r4b.model.Coding) Narrative(org.hl7.fhir.r4b.model.Narrative) SampledData(org.hl7.fhir.r4b.model.SampledData) PrimitiveType(org.hl7.fhir.r4b.model.PrimitiveType) ElementDefinition(org.hl7.fhir.r4b.model.ElementDefinition) InstantType(org.hl7.fhir.r4b.model.InstantType) DomainResource(org.hl7.fhir.r4b.model.DomainResource) Resource(org.hl7.fhir.r4b.model.Resource) Period(org.hl7.fhir.r4b.model.Period) ResourceWithReference(org.hl7.fhir.r4b.renderers.utils.Resolver.ResourceWithReference) Range(org.hl7.fhir.r4b.model.Range) RelatedArtifact(org.hl7.fhir.r4b.model.RelatedArtifact) IdType(org.hl7.fhir.r4b.model.IdType) DateTimeType(org.hl7.fhir.r4b.model.DateTimeType) UsageContext(org.hl7.fhir.r4b.model.UsageContext) Timing(org.hl7.fhir.r4b.model.Timing) CodeableConcept(org.hl7.fhir.r4b.model.CodeableConcept) NotImplementedException(org.apache.commons.lang3.NotImplementedException) UriType(org.hl7.fhir.r4b.model.UriType) HumanName(org.hl7.fhir.r4b.model.HumanName) ContactPoint(org.hl7.fhir.r4b.model.ContactPoint) Ratio(org.hl7.fhir.r4b.model.Ratio) Enumeration(org.hl7.fhir.r4b.model.Enumeration) CodeableReference(org.hl7.fhir.r4b.model.CodeableReference) ResourceWithReference(org.hl7.fhir.r4b.renderers.utils.Resolver.ResourceWithReference) Reference(org.hl7.fhir.r4b.model.Reference) BooleanType(org.hl7.fhir.r4b.model.BooleanType) Quantity(org.hl7.fhir.r4b.model.Quantity) Base(org.hl7.fhir.r4b.model.Base) Annotation(org.hl7.fhir.r4b.model.Annotation) Extension(org.hl7.fhir.r4b.model.Extension) ContactDetail(org.hl7.fhir.r4b.model.ContactDetail) CodeableReference(org.hl7.fhir.r4b.model.CodeableReference) Signature(org.hl7.fhir.r4b.model.Signature) CodeType(org.hl7.fhir.r4b.model.CodeType) Base64BinaryType(org.hl7.fhir.r4b.model.Base64BinaryType)

Aggregations

FHIRException (org.hl7.fhir.exceptions.FHIRException)18 EqualsBuilder (org.apache.commons.lang3.builder.EqualsBuilder)12 IPrimitiveType (org.hl7.fhir.instance.model.api.IPrimitiveType)12 IOException (java.io.IOException)10 NotImplementedException (org.apache.commons.lang3.NotImplementedException)10 ParameterizedTest (org.junit.jupiter.params.ParameterizedTest)9 MethodSource (org.junit.jupiter.params.provider.MethodSource)9 PrimitiveType (org.hl7.fhir.r5.model.PrimitiveType)8 CommaSeparatedStringBuilder (org.hl7.fhir.utilities.CommaSeparatedStringBuilder)8 URISyntaxException (java.net.URISyntaxException)6 PrimitiveType (org.hl7.fhir.definitions.model.PrimitiveType)6 FileNotFoundException (java.io.FileNotFoundException)5 ArrayList (java.util.ArrayList)5 PrimitiveType (org.hl7.fhir.dstu3.model.PrimitiveType)5 PrimitiveType (org.hl7.fhir.r4b.model.PrimitiveType)5 XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)5 URI (java.net.URI)4 ElementDefn (org.hl7.fhir.definitions.model.ElementDefn)4 StringType (org.hl7.fhir.dstu3.model.StringType)4 ParserConfigurationException (javax.xml.parsers.ParserConfigurationException)3