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Example 16 with Property

use of org.hl7.fhir.r4.elementmodel.Property in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeConceptMapOtherElementComponent.

protected void composeConceptMapOtherElementComponent(Complex parent, String parentType, String name, ConceptMap.OtherElementComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "dependsOn", name, element, index);
    if (element.hasPropertyElement())
        composeUri(t, "ConceptMap", "property", element.getPropertyElement(), -1);
    if (element.hasSystemElement())
        composeUri(t, "ConceptMap", "system", element.getSystemElement(), -1);
    if (element.hasCodeElement())
        composeString(t, "ConceptMap", "code", element.getCodeElement(), -1);
    if (element.hasDisplayElement())
        composeString(t, "ConceptMap", "display", element.getDisplayElement(), -1);
}
Also used : Complex(org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)

Example 17 with Property

use of org.hl7.fhir.r4.elementmodel.Property in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeCodeSystemConceptDefinitionComponent.

protected void composeCodeSystemConceptDefinitionComponent(Complex parent, String parentType, String name, CodeSystem.ConceptDefinitionComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "concept", name, element, index);
    if (element.hasCodeElement())
        composeCode(t, "CodeSystem", "code", element.getCodeElement(), -1);
    if (element.hasDisplayElement())
        composeString(t, "CodeSystem", "display", element.getDisplayElement(), -1);
    if (element.hasDefinitionElement())
        composeString(t, "CodeSystem", "definition", element.getDefinitionElement(), -1);
    for (int i = 0; i < element.getDesignation().size(); i++) composeCodeSystemConceptDefinitionDesignationComponent(t, "CodeSystem", "designation", element.getDesignation().get(i), i);
    for (int i = 0; i < element.getProperty().size(); i++) composeCodeSystemConceptPropertyComponent(t, "CodeSystem", "property", element.getProperty().get(i), i);
    for (int i = 0; i < element.getConcept().size(); i++) composeCodeSystemConceptDefinitionComponent(t, "CodeSystem", "concept", element.getConcept().get(i), i);
}
Also used : Complex(org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)

Example 18 with Property

use of org.hl7.fhir.r4.elementmodel.Property in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method initSpanningTable.

public TableModel initSpanningTable(HierarchicalTableGenerator gen, String prefix, boolean isLogical, String id) {
    TableModel model = gen.new TableModel(id, false);
    model.setDocoImg(prefix + "help16.png");
    // todo: change to graph definition
    model.setDocoRef(prefix + "formats.html#table");
    model.getTitles().add(gen.new Title(null, model.getDocoRef(), "Property", "A profiled resource", null, 0));
    model.getTitles().add(gen.new Title(null, model.getDocoRef(), "Card.", "Minimum and Maximum # of times the the element can appear in the instance", null, 0));
    model.getTitles().add(gen.new Title(null, model.getDocoRef(), "Content", "What goes here", null, 0));
    model.getTitles().add(gen.new Title(null, model.getDocoRef(), "Description", "Description of the profile", null, 0));
    return model;
}
Also used : TableModel(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.TableModel)

Example 19 with Property

use of org.hl7.fhir.r4.elementmodel.Property in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateExample.

private org.hl7.fhir.dstu3.elementmodel.Element generateExample(StructureDefinition profile, ExampleValueAccessor accessor) throws FHIRException {
    ElementDefinition ed = profile.getSnapshot().getElementFirstRep();
    org.hl7.fhir.dstu3.elementmodel.Element r = new org.hl7.fhir.dstu3.elementmodel.Element(ed.getPath(), new Property(context, ed, profile));
    List<ElementDefinition> children = getChildMap(profile, ed);
    for (ElementDefinition child : children) {
        if (child.getPath().endsWith(".id")) {
            org.hl7.fhir.dstu3.elementmodel.Element id = new org.hl7.fhir.dstu3.elementmodel.Element("id", new Property(context, child, profile));
            id.setValue(profile.getId() + accessor.getId());
            r.getChildren().add(id);
        } else {
            org.hl7.fhir.dstu3.elementmodel.Element e = createExampleElement(profile, child, accessor);
            if (e != null)
                r.getChildren().add(e);
        }
    }
    return r;
}
Also used : Element(org.hl7.fhir.dstu3.model.Element) ElementDefinition(org.hl7.fhir.dstu3.model.ElementDefinition) Property(org.hl7.fhir.dstu3.elementmodel.Property)

Example 20 with Property

use of org.hl7.fhir.r4.elementmodel.Property in project org.hl7.fhir.core by hapifhir.

the class ProfileComparer method compareElements.

/**
 * left and right refer to the same element. Are they compatible?
 * @param outcome
 * @param outcome
 * @param path
 * @param left
 * @param right
 * @- if there's a problem that needs fixing in this code
 * @throws DefinitionException
 * @throws IOException
 * @throws FHIRFormatError
 */
private boolean compareElements(ProfileComparison outcome, String path, DefinitionNavigator left, DefinitionNavigator right) throws DefinitionException, IOException, FHIRFormatError {
    // preconditions:
    assert (path != null);
    assert (left != null);
    assert (right != null);
    assert (left.path().equals(right.path()));
    // we ignore slicing right now - we're going to clone the root one anyway, and then think about clones
    // simple stuff
    ElementDefinition subset = new ElementDefinition();
    subset.setPath(left.path());
    // not allowed to be different:
    // can't be bothered even testing this one
    subset.getRepresentation().addAll(left.current().getRepresentation());
    if (!outcome.ruleCompares(subset, left.current().getDefaultValue(), right.current().getDefaultValue(), path + ".defaultValue[x]", BOTH_NULL))
        return false;
    subset.setDefaultValue(left.current().getDefaultValue());
    if (!outcome.ruleEqual(path, subset, left.current().getMeaningWhenMissing(), right.current().getMeaningWhenMissing(), "meaningWhenMissing Must be the same", true))
        return false;
    subset.setMeaningWhenMissing(left.current().getMeaningWhenMissing());
    if (!outcome.ruleEqual(subset, left.current().getIsModifier(), right.current().getIsModifier(), path, "isModifier"))
        return false;
    subset.setIsModifier(left.current().getIsModifier());
    if (!outcome.ruleEqual(subset, left.current().getIsSummary(), right.current().getIsSummary(), path, "isSummary"))
        return false;
    subset.setIsSummary(left.current().getIsSummary());
    // descriptive properties from ElementDefinition - merge them:
    subset.setLabel(mergeText(subset, outcome, path, "label", left.current().getLabel(), right.current().getLabel()));
    subset.setShort(mergeText(subset, outcome, path, "short", left.current().getShort(), right.current().getShort()));
    subset.setDefinition(mergeText(subset, outcome, path, "definition", left.current().getDefinition(), right.current().getDefinition()));
    subset.setComment(mergeText(subset, outcome, path, "comments", left.current().getComment(), right.current().getComment()));
    subset.setRequirements(mergeText(subset, outcome, path, "requirements", left.current().getRequirements(), right.current().getRequirements()));
    subset.getCode().addAll(mergeCodings(left.current().getCode(), right.current().getCode()));
    subset.getAlias().addAll(mergeStrings(left.current().getAlias(), right.current().getAlias()));
    subset.getMapping().addAll(mergeMappings(left.current().getMapping(), right.current().getMapping()));
    // left will win for example
    subset.setExample(left.current().hasExample() ? left.current().getExample() : right.current().getExample());
    subset.setMustSupport(left.current().getMustSupport() || right.current().getMustSupport());
    ElementDefinition superset = subset.copy();
    // compare and intersect
    superset.setMin(unionMin(left.current().getMin(), right.current().getMin()));
    superset.setMax(unionMax(left.current().getMax(), right.current().getMax()));
    subset.setMin(intersectMin(left.current().getMin(), right.current().getMin()));
    subset.setMax(intersectMax(left.current().getMax(), right.current().getMax()));
    outcome.rule(subset, subset.getMax().equals("*") || Integer.parseInt(subset.getMax()) >= subset.getMin(), path, "Cardinality Mismatch: " + card(left) + "/" + card(right));
    superset.getType().addAll(unionTypes(path, left.current().getType(), right.current().getType()));
    subset.getType().addAll(intersectTypes(subset, outcome, path, left.current().getType(), right.current().getType()));
    outcome.rule(subset, !subset.getType().isEmpty() || (!left.current().hasType() && !right.current().hasType()), path, "Type Mismatch:\r\n  " + typeCode(left) + "\r\n  " + typeCode(right));
    // <fixed[x]><!-- ?? 0..1 * Value must be exactly this --></fixed[x]>
    // <pattern[x]><!-- ?? 0..1 * Value must have at least these property values --></pattern[x]>
    superset.setMaxLengthElement(unionMaxLength(left.current().getMaxLength(), right.current().getMaxLength()));
    subset.setMaxLengthElement(intersectMaxLength(left.current().getMaxLength(), right.current().getMaxLength()));
    if (left.current().hasBinding() || right.current().hasBinding()) {
        compareBindings(outcome, subset, superset, path, left.current(), right.current());
    }
    // note these are backwards
    superset.getConstraint().addAll(intersectConstraints(path, left.current().getConstraint(), right.current().getConstraint()));
    subset.getConstraint().addAll(unionConstraints(subset, outcome, path, left.current().getConstraint(), right.current().getConstraint()));
    // now process the slices
    if (left.current().hasSlicing() || right.current().hasSlicing()) {
        if (isExtension(left.path()))
            return compareExtensions(outcome, path, superset, subset, left, right);
        else
            throw new DefinitionException("Slicing is not handled yet");
    // todo: name
    }
    // add the children
    outcome.subset.getSnapshot().getElement().add(subset);
    outcome.superset.getSnapshot().getElement().add(superset);
    return compareChildren(subset, outcome, path, left, right);
}
Also used : ElementDefinition(org.hl7.fhir.dstu3.model.ElementDefinition) DefinitionException(org.hl7.fhir.exceptions.DefinitionException)

Aggregations

ArrayList (java.util.ArrayList)35 FHIRException (org.hl7.fhir.exceptions.FHIRException)35 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)30 JsonElement (com.google.gson.JsonElement)23 FHIRFormatError (org.hl7.fhir.exceptions.FHIRFormatError)21 StructureDefinition (org.hl7.fhir.dstu3.model.StructureDefinition)15 JsonObject (com.google.gson.JsonObject)14 List (java.util.List)14 StructureDefinition (org.hl7.fhir.r4.model.StructureDefinition)14 Complex (org.hl7.fhir.r4.utils.formats.Turtle.Complex)13 StructureDefinition (org.hl7.fhir.r4b.model.StructureDefinition)13 StructureDefinition (org.hl7.fhir.r5.model.StructureDefinition)13 ElementDefinition (org.hl7.fhir.dstu3.model.ElementDefinition)11 HashMap (java.util.HashMap)8 HashSet (java.util.HashSet)8 Collectors (java.util.stream.Collectors)8 ElementDefinition (org.hl7.fhir.r4.model.ElementDefinition)8 SpecialElement (org.hl7.fhir.r4b.elementmodel.Element.SpecialElement)8 NamedElement (org.hl7.fhir.r4b.elementmodel.ParserBase.NamedElement)8 SpecialElement (org.hl7.fhir.r5.elementmodel.Element.SpecialElement)8