Examples with FINAL org.hl7.fhir.r4.model.Observation.ObservationStatus.FINAL used on opensource projects

Example 81 with FINAL

use of org.hl7.fhir.r4.model.Observation.ObservationStatus.FINAL in project pathling by aehrc.

the class BatchProvider method batch.

@Transaction
@OperationAccess("batch")
public Bundle batch(@Nullable @TransactionParam final Bundle bundle) {
    checkUserInput(bundle != null, "Bundle must be provided");
    final Map<ResourceType, List<IBaseResource>> resourcesForUpdate = new EnumMap<>(ResourceType.class);
    final Bundle response = new Bundle();
    response.setType(BATCHRESPONSE);
    // the responses should these operations be successful.
    for (final Bundle.BundleEntryComponent entry : bundle.getEntry()) {
        processEntry(resourcesForUpdate, response, entry);
    }
    if (!resourcesForUpdate.isEmpty()) {
        // Merge in any updated resources into their respective tables.
        update(resourcesForUpdate);
    }
    return response;
}

Example 82 with FINAL

use of org.hl7.fhir.r4.model.Observation.ObservationStatus.FINAL in project pathling by aehrc.

the class BatchProvider method addResponse.

private void addResponse(@Nonnull final Bundle response, @Nonnull final IBaseResource preparedResource) {
    final BundleEntryComponent responseEntry = response.addEntry();
    final BundleEntryResponseComponent responseElement = new BundleEntryResponseComponent();
    responseElement.setStatus("200");
    responseEntry.setResponse(responseElement);
    responseEntry.setResource((Resource) preparedResource);
}

Example 83 with FINAL

use of org.hl7.fhir.r4.model.Observation.ObservationStatus.FINAL in project pathling by aehrc.

the class TestData method newQuestionnaire.

/**
 * Returns a FHIR Questionnaire resource for testing purposes.
 */
public static Questionnaire newQuestionnaire() {
    final Questionnaire questionnaire = new Questionnaire();
    questionnaire.setId("Questionnaire/1");
    final QuestionnaireItemComponent item = questionnaire.addItem();
    item.addEnableWhen().setAnswer(new DecimalType(TEST_VERY_SMALL_DECIMAL_SCALE_6));
    item.addInitial().setValue(new DecimalType(TEST_VERY_BIG_DECIMAL));
    // This nested item will be discarded on import, as we currently skip recursive elements.
    final QuestionnaireItemComponent nestedItem = item.addItem();
    nestedItem.addInitial().setValue(new DecimalType(TEST_SMALL_DECIMAL));
    return questionnaire;
}

Example 84 with FINAL

use of org.hl7.fhir.r4.model.Observation.ObservationStatus.FINAL in project pathling by aehrc.

the class TestData method newCondition.

/**
 * Returns a FHIR Condition for testing purposes.
 */
public static Condition newCondition() {
    final Condition condition = new Condition();
    // Condition based on example from FHIR:
    // https://www.hl7.org/fhir/condition-example.json.html
    condition.setId("example");
    condition.setLanguage("en_US");
    // Narrative text
    final Narrative narrative = new Narrative();
    narrative.setStatusAsString("generated");
    narrative.setDivAsString("This data was generated for test purposes.");
    final XhtmlNode node = new XhtmlNode();
    node.setNodeType(NodeType.Text);
    node.setValue("Severe burn of left ear (Date: 24-May 2012)");
    condition.setText(narrative);
    condition.setSubject(new Reference("Patient/example").setDisplay("Here is a display for you."));
    final CodeableConcept verificationStatus = new CodeableConcept();
    verificationStatus.addCoding(new Coding(ConditionVerStatus.CONFIRMED.getSystem(), ConditionVerStatus.CONFIRMED.toCode(), ConditionVerStatus.CONFIRMED.getDisplay()));
    condition.setVerificationStatus(verificationStatus);
    // Condition code
    final CodeableConcept code = new CodeableConcept();
    code.addCoding().setSystem("http://snomed.info/sct").setCode("39065001").setDisplay("Severe");
    condition.setSeverity(code);
    // Severity code
    final CodeableConcept severity = new CodeableConcept();
    severity.addCoding().setSystem("http://snomed.info/sct").setCode("24484000").setDisplay("Burn of ear").setUserSelected(true);
    condition.setSeverity(severity);
    // Onset date time
    final DateTimeType onset = new DateTimeType();
    onset.setValueAsString("2012-05-24");
    condition.setOnset(onset);
    return condition;
}

Example 85 with FINAL

use of org.hl7.fhir.r4.model.Observation.ObservationStatus.FINAL in project pathling by aehrc.

the class TestData method newConditionWithExtensions.

public static Condition newConditionWithExtensions() {
    // Condition
    // - extension:
    // - url: uuid:ext1
    // - value: ext1
    // - extension:
    // - url: uuid:ext2
    // - value: 2
    // - extension:
    // - url: uuid:ext4
    // - extension
    // - url: uuid:nested
    // - value: nested
    // - identifier
    // - id: uuid:identifier1
    // - extension:
    // - url: uuid:ext10
    // - value: ext10
    // - extension:
    // - url: uuid:ext11
    // - value: 11
    // - stage
    // - type
    // - extension
    // - url: uuid:ext12
    // - value: ext12
    final Condition conditionWithExtension = new Condition();
    conditionWithExtension.setId("someId");
    final Extension nestedExtension = new Extension("uuid:ext4");
    nestedExtension.addExtension(new Extension("uuid:nested", new StringType("nested")));
    conditionWithExtension.setExtension(Arrays.asList(new Extension("uuid:ext1", new StringType("ext1")), new Extension("uuid:ext2", new IntegerType(2)), nestedExtension));
    conditionWithExtension.setMeta(new Meta().setVersionId("MetVersion"));
    conditionWithExtension.setOnset(new Range());
    conditionWithExtension.setSeverity(new CodeableConcept().addCoding(new Coding("sys", "code", "name")));
    final Identifier identifier = conditionWithExtension.getIdentifierFirstRep();
    identifier.setId("uuid:identifier1");
    identifier.setExtension(Arrays.asList(new Extension("uuid:ext10", new StringType("ext10")), new Extension("uuid:ext11", new IntegerType(11))));
    final ConditionStageComponent stage = conditionWithExtension.getStageFirstRep();
    stage.getType().setExtension(Collections.singletonList(new Extension("uuid:ext12", new StringType("ext12"))));
    return conditionWithExtension;
}