Examples with UnusedTracker org.hl7.fhir.r4b.conformance.ProfileUtilities.UnusedTracker used on opensource projects

Example 11 with UnusedTracker

use of org.hl7.fhir.r4b.conformance.ProfileUtilities.UnusedTracker in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method genElement.

private void genElement(String defPath, HierarchicalTableGenerator gen, List<Row> rows, ElementDefinition element, List<ElementDefinition> all, List<StructureDefinition> profiles, boolean showMissing, String profileBaseFileName, Boolean extensions, boolean snapshot, String corePath, boolean root, boolean logicalModel) throws IOException {
    StructureDefinition profile = profiles == null ? null : profiles.get(profiles.size() - 1);
    String s = tail(element.getPath());
    List<ElementDefinition> children = getChildren(all, element);
    boolean isExtension = (s.equals("extension") || s.equals("modifierExtension"));
    if (!snapshot && isExtension && extensions != null && extensions != isExtension)
        return;
    if (!onlyInformationIsMapping(all, element)) {
        Row row = gen.new Row();
        row.setAnchor(element.getPath());
        row.setColor(getRowColor(element));
        boolean hasDef = element != null;
        boolean ext = false;
        if (s.equals("extension") || s.equals("modifierExtension")) {
            if (element.hasType() && element.getType().get(0).hasProfile() && extensionIsComplex(element.getType().get(0).getProfile().get(0).getValue()))
                row.setIcon("icon_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
            else
                row.setIcon("icon_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
            ext = true;
        } else if (!hasDef || element.getType().size() == 0)
            row.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
        else if (hasDef && element.getType().size() > 1) {
            if (allTypesAre(element.getType(), "Reference"))
                row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
            else
                row.setIcon("icon_choice.gif", HierarchicalTableGenerator.TEXT_ICON_CHOICE);
        } else if (hasDef && element.getType().get(0).getCode() != null && element.getType().get(0).getCode().startsWith("@"))
            row.setIcon("icon_reuse.png", HierarchicalTableGenerator.TEXT_ICON_REUSE);
        else if (hasDef && isPrimitive(element.getType().get(0).getCode()))
            row.setIcon("icon_primitive.png", HierarchicalTableGenerator.TEXT_ICON_PRIMITIVE);
        else if (hasDef && isReference(element.getType().get(0).getCode()))
            row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
        else if (hasDef && isDataType(element.getType().get(0).getCode()))
            row.setIcon("icon_datatype.gif", HierarchicalTableGenerator.TEXT_ICON_DATATYPE);
        else
            row.setIcon("icon_resource.png", HierarchicalTableGenerator.TEXT_ICON_RESOURCE);
        String ref = defPath == null ? null : defPath + makePathLink(element);
        UnusedTracker used = new UnusedTracker();
        used.used = true;
        Cell left = gen.new Cell(null, ref, s, !hasDef ? null : element.getDefinition(), null);
        row.getCells().add(left);
        Cell gc = gen.new Cell();
        row.getCells().add(gc);
        if (element != null && element.getIsModifier())
            checkForNoChange(element.getIsModifierElement(), gc.addStyledText("This element is a modifier element", "?!", null, null, null, false));
        if (element != null && element.getMustSupport())
            checkForNoChange(element.getMustSupportElement(), gc.addStyledText("This element must be supported", "S", null, null, null, false));
        if (element != null && element.getIsSummary())
            checkForNoChange(element.getIsSummaryElement(), gc.addStyledText("This element is included in summaries", "∑", null, null, null, false));
        if (element != null && (!element.getConstraint().isEmpty() || !element.getCondition().isEmpty()))
            gc.addStyledText("This element has or is affected by some invariants", "I", null, null, null, false);
        ExtensionContext extDefn = null;
        if (ext) {
            if (element != null && element.getType().size() == 1 && element.getType().get(0).hasProfile()) {
                extDefn = locateExtension(StructureDefinition.class, element.getType().get(0).getProfile().get(0).getValue());
                if (extDefn == null) {
                    genCardinality(gen, element, row, hasDef, used, null);
                    row.getCells().add(gen.new Cell(null, null, "?? " + element.getType().get(0).getProfile(), null, null));
                    generateDescription(gen, row, element, null, used.used, profile.getUrl(), element.getType().get(0).getProfile().get(0).getValue(), profile, corePath, root, logicalModel);
                } else {
                    String name = urltail(element.getType().get(0).getProfile().get(0).getValue());
                    left.getPieces().get(0).setText(name);
                    // left.getPieces().get(0).setReference((String) extDefn.getExtensionStructure().getTag("filename"));
                    left.getPieces().get(0).setHint("Extension URL = " + extDefn.getUrl());
                    genCardinality(gen, element, row, hasDef, used, extDefn.getElement());
                    ElementDefinition valueDefn = extDefn.getExtensionValueDefinition();
                    if (valueDefn != null && !"0".equals(valueDefn.getMax()))
                        genTypes(gen, row, valueDefn, profileBaseFileName, profile, corePath);
                    else
                        // if it's complex, we just call it nothing
                        // genTypes(gen, row, extDefn.getSnapshot().getElement().get(0), profileBaseFileName, profile);
                        row.getCells().add(gen.new Cell(null, null, "(Complex)", null, null));
                    generateDescription(gen, row, element, extDefn.getElement(), used.used, null, extDefn.getUrl(), profile, corePath, root, logicalModel);
                }
            } else {
                genCardinality(gen, element, row, hasDef, used, null);
                if ("0".equals(element.getMax()))
                    row.getCells().add(gen.new Cell());
                else
                    genTypes(gen, row, element, profileBaseFileName, profile, corePath);
                generateDescription(gen, row, element, null, used.used, null, null, profile, corePath, root, logicalModel);
            }
        } else {
            genCardinality(gen, element, row, hasDef, used, null);
            if (hasDef && !"0".equals(element.getMax()))
                genTypes(gen, row, element, profileBaseFileName, profile, corePath);
            else
                row.getCells().add(gen.new Cell());
            generateDescription(gen, row, element, null, used.used, null, null, profile, corePath, root, logicalModel);
        }
        if (element.hasSlicing()) {
            if (standardExtensionSlicing(element)) {
                used.used = element.hasType() && element.getType().get(0).hasProfile();
                showMissing = false;
            } else {
                row.setIcon("icon_slice.png", HierarchicalTableGenerator.TEXT_ICON_SLICE);
                row.getCells().get(2).getPieces().clear();
                for (Cell cell : row.getCells()) for (Piece p : cell.getPieces()) {
                    p.addStyle("font-style: italic");
                }
            }
        }
        if (used.used || showMissing)
            rows.add(row);
        if (!used.used && !element.hasSlicing()) {
            for (Cell cell : row.getCells()) for (Piece p : cell.getPieces()) {
                p.setStyle("text-decoration:line-through");
                p.setReference(null);
            }
        } else {
            for (ElementDefinition child : children) if (logicalModel || !child.getPath().endsWith(".id"))
                genElement(defPath, gen, row.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, isExtension, snapshot, corePath, false, logicalModel);
            if (!snapshot && (extensions == null || !extensions))
                for (ElementDefinition child : children) if (child.getPath().endsWith(".extension"))
                    genElement(defPath, gen, row.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, true, false, corePath, false, logicalModel);
        }
    }
}

Example 12 with UnusedTracker

use of org.hl7.fhir.r4b.conformance.ProfileUtilities.UnusedTracker in project org.hl7.fhir.core by hapifhir.

the class ProfileComparer method genElementComp.

private void genElementComp(String defPath, HierarchicalTableGenerator gen, List<Row> rows, StructuralMatch<ElementDefinitionNode> combined, String corePath, String prefix, Row slicingRow, boolean root) throws IOException {
    Row originalRow = slicingRow;
    Row typesRow = null;
    List<StructuralMatch<ElementDefinitionNode>> children = combined.getChildren();
    Row row = gen.new Row();
    rows.add(row);
    String path = combined.either().getDef().getPath();
    row.setAnchor(path);
    row.setColor(utilsRight.getRowColor(combined.either().getDef(), false));
    if (eitherHasSlicing(combined))
        row.setLineColor(1);
    else if (eitherHasSliceName(combined))
        row.setLineColor(2);
    else
        row.setLineColor(0);
    boolean ext = false;
    if (tail(path).equals("extension")) {
        if (elementIsComplex(combined))
            row.setIcon("icon_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
        else
            row.setIcon("icon_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
        ext = true;
    } else if (tail(path).equals("modifierExtension")) {
        if (elementIsComplex(combined))
            row.setIcon("icon_modifier_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
        else
            row.setIcon("icon_modifier_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
    } else if (hasChoice(combined)) {
        if (allAreReference(combined))
            row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
        else {
            row.setIcon("icon_choice.gif", HierarchicalTableGenerator.TEXT_ICON_CHOICE);
            typesRow = row;
        }
    } else if (combined.either().getDef().hasContentReference())
        row.setIcon("icon_reuse.png", HierarchicalTableGenerator.TEXT_ICON_REUSE);
    else if (isPrimitive(combined))
        row.setIcon("icon_primitive.png", HierarchicalTableGenerator.TEXT_ICON_PRIMITIVE);
    else if (hasTarget(combined))
        row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
    else if (isDataType(combined))
        row.setIcon("icon_datatype.gif", HierarchicalTableGenerator.TEXT_ICON_DATATYPE);
    else
        row.setIcon("icon_resource.png", HierarchicalTableGenerator.TEXT_ICON_RESOURCE);
    String ref = defPath == null ? null : defPath + combined.either().getDef().getId();
    String sName = tail(path);
    String sn = getSliceName(combined);
    if (sn != null)
        sName = sName + ":" + sn;
    UnusedTracker used = new UnusedTracker();
    Cell nc;
    String leftColor = !combined.hasLeft() ? COLOR_NO_ROW_LEFT : combined.hasErrors() ? COLOR_DIFFERENT : null;
    String rightColor = !combined.hasRight() ? COLOR_NO_ROW_LEFT : combined.hasErrors() ? COLOR_DIFFERENT : null;
    if (combined.hasLeft()) {
        nc = utilsRight.genElementNameCell(gen, combined.getLeft().getDef(), "??", true, corePath, prefix, root, false, false, combined.getLeft().getSrc(), typesRow, row, false, ext, used, ref, sName, null);
    } else {
        nc = utilsRight.genElementNameCell(gen, combined.getRight().getDef(), "??", true, corePath, prefix, root, false, false, combined.getRight().getSrc(), typesRow, row, false, ext, used, ref, sName, null);
    }
    if (combined.hasLeft()) {
        frame(utilsRight.genElementCells(gen, combined.getLeft().getDef(), "??", true, corePath, prefix, root, false, false, combined.getLeft().getSrc(), typesRow, row, true, ext, used, ref, sName, nc, false, false, null), leftColor);
    } else {
        frame(spacers(row, 4, gen), leftColor);
    }
    if (combined.hasRight()) {
        frame(utilsRight.genElementCells(gen, combined.getRight().getDef(), "??", true, corePath, prefix, root, false, false, combined.getRight().getSrc(), typesRow, row, true, ext, used, ref, sName, nc, false, false, null), rightColor);
    } else {
        frame(spacers(row, 4, gen), rightColor);
    }
    row.getCells().add(cellForMessages(gen, combined.getMessages()));
    for (StructuralMatch<ElementDefinitionNode> child : children) {
        genElementComp(defPath, gen, row.getSubRows(), child, corePath, prefix, originalRow, false);
    }
}

Example 13 with UnusedTracker

use of org.hl7.fhir.r4b.conformance.ProfileUtilities.UnusedTracker in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method genElementNameCell.

public Cell genElementNameCell(HierarchicalTableGenerator gen, ElementDefinition element, String profileBaseFileName, boolean snapshot, String corePath, String imagePath, boolean root, boolean logicalModel, boolean allInvariants, StructureDefinition profile, Row typesRow, Row row, boolean hasDef, boolean ext, UnusedTracker used, String ref, String sName, List<ElementDefinition> elements) throws IOException {
    String hint = "";
    hint = checkAdd(hint, (element.hasSliceName() ? translate("sd.table", "Slice") + " " + element.getSliceName() : ""));
    if (hasDef && element.hasDefinition()) {
        hint = checkAdd(hint, (hasDef && element.hasSliceName() ? ": " : ""));
        hint = checkAdd(hint, !hasDef ? null : gt(element.getDefinitionElement()));
    }
    if (element.hasSlicing() && slicesExist(elements, element)) {
        // some elements set up slicing but don't actually slice, so we don't augment the name
        sName = "Slices for " + sName;
    }
    Cell left = gen.new Cell(null, ref, sName, hint, null);
    row.getCells().add(left);
    return left;
}

Example 14 with UnusedTracker

use of org.hl7.fhir.r4b.conformance.ProfileUtilities.UnusedTracker in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateExtensionTable.

public XhtmlNode generateExtensionTable(String defFile, StructureDefinition ed, String imageFolder, boolean inlineGraphics, boolean full, String corePath, String imagePath, Set<String> outputTracker, RenderingContext rc) throws IOException, FHIRException {
    HierarchicalTableGenerator gen = new HierarchicalTableGenerator(imageFolder, inlineGraphics, true);
    gen.setTranslator(getTranslator());
    TableModel model = gen.initNormalTable(corePath, false, true, ed.getId() + (full ? "f" : "n"), true);
    boolean deep = false;
    String m = "";
    boolean vdeep = false;
    if (ed.getSnapshot().getElementFirstRep().getIsModifier())
        m = "modifier_";
    for (ElementDefinition eld : ed.getSnapshot().getElement()) {
        deep = deep || eld.getPath().contains("Extension.extension.");
        vdeep = vdeep || eld.getPath().contains("Extension.extension.extension.");
    }
    Row r = gen.new Row();
    model.getRows().add(r);
    String en;
    if (!full)
        en = ed.getName();
    else if (ed.getSnapshot().getElement().get(0).getIsModifier())
        en = "modifierExtension";
    else
        en = "extension";
    r.getCells().add(gen.new Cell(null, defFile == null ? "" : defFile + "-definitions.html#extension." + ed.getName(), en, null, null));
    r.getCells().add(gen.new Cell());
    r.getCells().add(gen.new Cell(null, null, describeCardinality(ed.getSnapshot().getElement().get(0), null, new UnusedTracker()), null, null));
    ElementDefinition ved = null;
    if (full || vdeep) {
        r.getCells().add(gen.new Cell("", "", "Extension", null, null));
        r.setIcon(deep ? "icon_" + m + "extension_complex.png" : "icon_extension_simple.png", deep ? HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX : HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
        List<ElementDefinition> children = getChildren(ed.getSnapshot().getElement(), ed.getSnapshot().getElement().get(0));
        for (ElementDefinition child : children) if (!child.getPath().endsWith(".id")) {
            List<StructureDefinition> sdl = new ArrayList<>();
            sdl.add(ed);
            genElement(defFile == null ? "" : defFile + "-definitions.html#extension.", gen, r.getSubRows(), child, ed.getSnapshot().getElement(), sdl, true, defFile, true, full, corePath, imagePath, true, false, false, false, null, false, rc);
        }
    } else if (deep) {
        List<ElementDefinition> children = new ArrayList<ElementDefinition>();
        for (ElementDefinition ted : ed.getSnapshot().getElement()) {
            if (ted.getPath().equals("Extension.extension"))
                children.add(ted);
        }
        r.getCells().add(gen.new Cell("", "", "Extension", null, null));
        r.setIcon("icon_" + m + "extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
        for (ElementDefinition c : children) {
            ved = getValueFor(ed, c);
            ElementDefinition ued = getUrlFor(ed, c);
            if (ved != null && ued != null) {
                Row r1 = gen.new Row();
                r.getSubRows().add(r1);
                r1.getCells().add(gen.new Cell(null, defFile == null ? "" : defFile + "-definitions.html#extension." + ed.getName(), ((UriType) ued.getFixed()).getValue(), null, null));
                r1.getCells().add(gen.new Cell());
                r1.getCells().add(gen.new Cell(null, null, describeCardinality(c, null, new UnusedTracker()), null, null));
                genTypes(gen, r1, ved, defFile, ed, corePath, imagePath, false, false);
                Cell cell = gen.new Cell();
                cell.addMarkdown(c.getDefinition());
                r1.getCells().add(cell);
                r1.setIcon("icon_" + m + "extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
            }
        }
    } else {
        for (ElementDefinition ted : ed.getSnapshot().getElement()) {
            if (ted.getPath().startsWith("Extension.value"))
                ved = ted;
        }
        genTypes(gen, r, ved, defFile, ed, corePath, imagePath, false, false);
        r.setIcon("icon_" + m + "extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
    }
    Cell c = gen.new Cell("", "", "URL = " + ed.getUrl(), null, null);
    Piece cc = gen.new Piece(null, ed.getName() + ": ", null);
    c.addPiece(gen.new Piece("br")).addPiece(cc);
    c.addMarkdown(ed.getDescription());
    if (!full && !(deep || vdeep) && ved != null && ved.hasBinding()) {
        c.addPiece(gen.new Piece("br"));
        BindingResolution br = pkp.resolveBinding(ed, ved.getBinding(), ved.getPath());
        c.getPieces().add(checkForNoChange(ved.getBinding(), gen.new Piece(null, translate("sd.table", "Binding") + ": ", null).addStyle("font-weight:bold")));
        c.getPieces().add(checkForNoChange(ved.getBinding(), gen.new Piece(br.url == null ? null : Utilities.isAbsoluteUrl(br.url) || !pkp.prependLinks() ? br.url : corePath + br.url, br.display, null)));
        if (ved.getBinding().hasStrength()) {
            c.getPieces().add(checkForNoChange(ved.getBinding(), gen.new Piece(null, " (", null)));
            c.getPieces().add(checkForNoChange(ved.getBinding(), gen.new Piece(corePath + "terminologies.html#" + ved.getBinding().getStrength().toCode(), egt(ved.getBinding().getStrengthElement()), ved.getBinding().getStrength().getDefinition())));
            c.getPieces().add(gen.new Piece(null, ")", null));
        }
        if (ved.getBinding().hasDescription() && MarkDownProcessor.isSimpleMarkdown(ved.getBinding().getDescription())) {
            c.getPieces().add(gen.new Piece(null, ": ", null));
            c.addMarkdownNoPara(PublicationHacker.fixBindingDescriptions(context, ved.getBinding().getDescriptionElement()).asStringValue());
        }
    }
    c.addPiece(gen.new Piece("br")).addPiece(gen.new Piece(null, describeExtensionContext(ed), null));
    r.getCells().add(c);
    try {
        return gen.generate(model, corePath, 0, outputTracker);
    } catch (org.hl7.fhir.exceptions.FHIRException e) {
        throw new FHIRException(e.getMessage(), e);
    }
}

Example 15 with UnusedTracker

use of org.hl7.fhir.r4b.conformance.ProfileUtilities.UnusedTracker in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method describeCardinality.

private String describeCardinality(ElementDefinition definition, ElementDefinition fallback, UnusedTracker tracker) {
    IntegerType min = definition.hasMinElement() ? definition.getMinElement() : new IntegerType();
    StringType max = definition.hasMaxElement() ? definition.getMaxElement() : new StringType();
    if (min.isEmpty() && fallback != null)
        min = fallback.getMinElement();
    if (max.isEmpty() && fallback != null)
        max = fallback.getMaxElement();
    tracker.used = !max.isEmpty() && !max.getValue().equals("0");
    if (min.isEmpty() && max.isEmpty())
        return null;
    else
        return (!min.hasValue() ? "" : Integer.toString(min.getValue())) + ".." + (!max.hasValue() ? "" : max.getValue());
}