Examples with Identifier org.hl7.fhir.r4b.model.Identifier used on opensource projects

Example 71 with Identifier

use of org.hl7.fhir.r4b.model.Identifier in project quality-measure-and-cohort-service by Alvearie.

the class RestFhirMeasureResolverIntegrationTest method resolve_by_identifier_without_version___returns_newest_semver.

@Test
public void resolve_by_identifier_without_version___returns_newest_semver() throws Exception {
    String measureName = "Measure1";
    Identifier identifier = mockMultipleSearchResults(measureName, "2.0.0", "1.1.0");
    Measure resolved = resolver.resolveByIdentifier(identifier.getValue(), identifier.getSystem(), null);
    assertEquals("2.0.0", resolved.getVersion());
}

Example 72 with Identifier

use of org.hl7.fhir.r4b.model.Identifier in project quality-measure-and-cohort-service by Alvearie.

the class DefaultVT method testMeasureEvaluationByMeasureIdentifier.

// to tag a specific test to be part of DVT (deployment verification test)
@Category(DVT.class)
@Test
public /**
 * Test a successful measure evaluation using identifier and version as the lookup key
 */
void testMeasureEvaluationByMeasureIdentifier() throws Exception {
    // You want -Denabled.dark.features=all in your Liberty jvm.options
    Assume.assumeTrue(isServiceDarkFeatureEnabled(CohortEngineRestConstants.DARK_LAUNCHED_MEASURE_EVALUATION));
    final String RESOURCE = getUrlBase() + CohortServiceAPISpec.CREATE_DELETE_EVALUATION_PATH;
    FhirContext fhirContext = FhirContext.forR4();
    IParser parser = fhirContext.newJsonParser().setPrettyPrint(true);
    Library library = TestHelper.getTemplateLibrary();
    Identifier identifier = new Identifier().setValue("measure-identifier").setSystem("http://ibm.com/health/test");
    Measure measure = TestHelper.getTemplateMeasure(library);
    measure.setIdentifier(Arrays.asList(identifier));
    ByteArrayOutputStream baos = new ByteArrayOutputStream();
    TestHelper.createMeasureArtifact(baos, parser, measure, library);
    // Files.write( baos.toByteArray(), new File("target/test_measure_v1_0_0.zip"));
    Map<String, Parameter> parameterOverrides = new HashMap<>();
    parameterOverrides.put("Measurement Period", new IntervalParameter(new DateParameter("2019-07-04"), true, new DateParameter("2020-07-04"), true));
    MeasureEvaluation requestData = new MeasureEvaluation();
    requestData.setDataServerConfig(dataServerConfig);
    requestData.setTerminologyServerConfig(termServerConfig);
    // This is a patient ID that is assumed to exist in the target FHIR server
    requestData.setPatientId(VALID_PATIENT_ID);
    requestData.setMeasureContext(new MeasureContext(null, parameterOverrides, new com.ibm.cohort.engine.measure.Identifier(identifier.getSystem(), identifier.getValue()), measure.getVersion()));
    requestData.setEvidenceOptions(new MeasureEvidenceOptions(false, MeasureEvidenceOptions.DefineReturnOptions.NONE));
    ObjectMapper om = new ObjectMapper();
    System.out.println(om.writeValueAsString(requestData));
    RequestSpecification request = buildBaseRequest(new Headers()).queryParam(CohortEngineRestHandler.VERSION, ServiceBuildConstants.DATE).multiPart(CohortEngineRestHandler.REQUEST_DATA_PART, requestData, "application/json").multiPart(CohortEngineRestHandler.MEASURE_PART, "test_measure_v1_0_0.zip", new ByteArrayInputStream(baos.toByteArray()));
    ValidatableResponse response = request.post(RESOURCE, getServiceVersion()).then();
    ValidatableResponse vr = runSuccessValidation(response, ContentType.JSON, HttpStatus.SC_OK);
    String expected = getJsonFromFile(ServiceAPIGlobalSpec.EXP_FOLDER_TYPE, "measure_evaluation_exp.json");
    String actual = vr.extract().asString();
    assertMeasureReportEquals(parser, expected, actual, false);
}

Example 73 with Identifier

use of org.hl7.fhir.r4b.model.Identifier in project quality-measure-and-cohort-service by Alvearie.

the class FHIRRestUtilsTest method testGetParametersForMeasureIdentifier.

/**
 * Test the successful building of a response.
 */
@Test
public void testGetParametersForMeasureIdentifier() {
    String idValue = "idValue";
    String idSystem = "idSystem";
    Identifier identifier = new Identifier().setValue(idValue).setSystem(idSystem);
    String version = "1.0.0";
    FhirResourceResolver<Measure> measureResolver = Mockito.mock(FhirResourceResolver.class);
    Mockito.when(measureResolver.resolveByIdentifier(idValue, idSystem, version)).thenReturn(createMeasure(testMeasureDef));
    List<MeasureParameterInfo> parameterInfoList = FHIRRestUtils.getParametersForMeasureIdentifier(measureResolver, identifier, version);
    MeasureParameterInfo expectedParamInfo = new MeasureParameterInfo();
    expectedParamInfo.setname("aName");
    expectedParamInfo.setUse("In");
    expectedParamInfo.setMax("1");
    expectedParamInfo.setMin(0);
    expectedParamInfo.setType("String");
    expectedParamInfo.setDocumentation(null);
    expectedParamInfo.defaultValue("42");
    assertThat(parameterInfoList, containsInAnyOrder(expectedParamInfo));
}

Example 74 with Identifier

use of org.hl7.fhir.r4b.model.Identifier in project quality-measure-and-cohort-service by Alvearie.

the class IdentifierBuilderTest method testBuilder.

@Test
public void testBuilder() {
    String system = "TEST SYSTEM";
    String code = "TEST CODE";
    String display = "TEST DISPLAY";
    String value = "TEST VALUE";
    Coding coding = new Coding(system, code, display);
    CodeableConcept type = new CodeableConcept(coding);
    Period period = new Period();
    period.setStart(new Date());
    period.setEnd(new Date());
    Reference assigner = new Reference("TEST REFERENCE");
    Identifier identifier = new IdentifierBuilder().buildUse(IdentifierUse.OFFICIAL).buildSystem(system).buildType(type).buildPeriod(period).buildValue(value).buildAssigner(assigner).build();
    assertEquals(IdentifierUse.OFFICIAL, identifier.getUse());
    assertEquals(system, identifier.getSystem());
    assertEquals(type, identifier.getType());
    assertEquals(period, identifier.getPeriod());
    assertEquals(value, identifier.getValue());
    assertEquals(assigner, identifier.getAssigner());
}

Example 75 with Identifier

use of org.hl7.fhir.r4b.model.Identifier in project quality-measure-and-cohort-service by Alvearie.

the class IdentifierBuilderTest method testStringUse.

@Test
public void testStringUse() {
    Identifier identifier = new IdentifierBuilder().buildUse("official").build();
    assertEquals(IdentifierUse.OFFICIAL, identifier.getUse());
}