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Example 46 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class XmlParserBase method compose.

/**
 * Compose a resource to a stream, possibly using pretty presentation for a human reader, and maybe a different choice in the xhtml narrative (used in the spec in one place, but should not be used in production)
 * @
 */
public void compose(OutputStream stream, Resource resource, boolean htmlPretty) throws IOException {
    XMLWriter writer = new XMLWriter(stream, "UTF-8");
    writer.setPretty(style == OutputStyle.PRETTY);
    writer.start();
    compose(writer, resource, htmlPretty);
    writer.end();
}
Also used : IXMLWriter(org.hl7.fhir.utilities.xml.IXMLWriter) XMLWriter(org.hl7.fhir.utilities.xml.XMLWriter)

Example 47 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class Factory method newNarrative.

public static Narrative newNarrative(NarrativeStatus status, String html) throws IOException, FHIRException {
    Narrative n = new Narrative();
    n.setStatus(status);
    try {
        n.setDiv(new XhtmlParser().parseFragment("<div>" + Utilities.escapeXml(html) + "</div>"));
    } catch (org.hl7.fhir.exceptions.FHIRException e) {
        throw new FHIRException(e.getMessage(), e);
    }
    return n;
}
Also used : XhtmlParser(org.hl7.fhir.utilities.xhtml.XhtmlParser) FHIRException(org.hl7.fhir.exceptions.FHIRException) FHIRException(org.hl7.fhir.exceptions.FHIRException)

Example 48 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class XmlParserBase method compose.

/**
 * Compose a resource to a stream, possibly using pretty presentation for a human reader, and maybe a different choice in the xhtml narrative (used in the spec in one place, but should not be used in production)
 * @
 */
public void compose(OutputStream stream, Resource resource, boolean htmlPretty) throws IOException {
    XMLWriter writer = new XMLWriter(stream, "UTF-8");
    writer.setPretty(style == OutputStyle.PRETTY);
    writer.start();
    compose(writer, resource, htmlPretty);
    writer.end();
}
Also used : IXMLWriter(org.hl7.fhir.utilities.xml.IXMLWriter) XMLWriter(org.hl7.fhir.utilities.xml.XMLWriter)

Example 49 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generateByProfile.

private String generateByProfile(Element er, StructureDefinition profile, boolean showCodeDetails) throws IOException {
    XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
    x.addTag("p").addTag("b").addText("Generated Narrative" + (showCodeDetails ? " with Details" : ""));
    try {
        generateByProfile(er, profile, er, profile.getSnapshot().getElement(), profile.getSnapshot().getElement().get(0), getChildrenForPath(profile.getSnapshot().getElement(), er.getLocalName()), x, er.getLocalName(), showCodeDetails);
    } catch (Exception e) {
        e.printStackTrace();
        x.addTag("p").addTag("b").setAttribute("style", "color: maroon").addText("Exception generating Narrative: " + e.getMessage());
    }
    inject(er, x, NarrativeStatus.GENERATED);
    return new XhtmlComposer(true, pretty).compose(x);
}
Also used : XhtmlComposer(org.hl7.fhir.utilities.xhtml.XhtmlComposer) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) UnsupportedEncodingException(java.io.UnsupportedEncodingException) NotImplementedException(org.apache.commons.lang3.NotImplementedException) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Example 50 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method renderLeaf.

private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints) throws FHIRException, UnsupportedEncodingException, IOException {
    if (ew == null)
        return;
    Base e = ew.getBase();
    if (e instanceof StringType)
        x.addText(((StringType) e).getValue());
    else if (e instanceof CodeType)
        x.addText(((CodeType) e).getValue());
    else if (e instanceof IdType)
        x.addText(((IdType) e).getValue());
    else if (e instanceof Extension)
        x.addText("Extensions: Todo");
    else if (e instanceof InstantType)
        x.addText(((InstantType) e).toHumanDisplay());
    else if (e instanceof DateTimeType)
        x.addText(((DateTimeType) e).toHumanDisplay());
    else if (e instanceof Base64BinaryType)
        x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
    else if (e instanceof org.hl7.fhir.dstu2016may.model.DateType)
        x.addText(((org.hl7.fhir.dstu2016may.model.DateType) e).toHumanDisplay());
    else if (e instanceof Enumeration) {
        Object ev = ((Enumeration<?>) e).getValue();
        // todo: look up a display name if there is one
        x.addText(ev == null ? "" : ev.toString());
    } else if (e instanceof BooleanType)
        x.addText(((BooleanType) e).getValue().toString());
    else if (e instanceof CodeableConcept) {
        renderCodeableConcept((CodeableConcept) e, x, showCodeDetails);
    } else if (e instanceof Coding) {
        renderCoding((Coding) e, x, showCodeDetails);
    } else if (e instanceof Annotation) {
        renderAnnotation((Annotation) e, x);
    } else if (e instanceof Identifier) {
        renderIdentifier((Identifier) e, x);
    } else if (e instanceof org.hl7.fhir.dstu2016may.model.IntegerType) {
        x.addText(Integer.toString(((org.hl7.fhir.dstu2016may.model.IntegerType) e).getValue()));
    } else if (e instanceof org.hl7.fhir.dstu2016may.model.DecimalType) {
        x.addText(((org.hl7.fhir.dstu2016may.model.DecimalType) e).getValue().toString());
    } else if (e instanceof HumanName) {
        renderHumanName((HumanName) e, x);
    } else if (e instanceof SampledData) {
        renderSampledData((SampledData) e, x);
    } else if (e instanceof Address) {
        renderAddress((Address) e, x);
    } else if (e instanceof ContactPoint) {
        renderContactPoint((ContactPoint) e, x);
    } else if (e instanceof UriType) {
        renderUri((UriType) e, x);
    } else if (e instanceof Timing) {
        renderTiming((Timing) e, x);
    } else if (e instanceof Range) {
        renderRange((Range) e, x);
    } else if (e instanceof Quantity) {
        renderQuantity((Quantity) e, x, showCodeDetails);
    } else if (e instanceof Ratio) {
        renderQuantity(((Ratio) e).getNumerator(), x, showCodeDetails);
        x.addText("/");
        renderQuantity(((Ratio) e).getDenominator(), x, showCodeDetails);
    } else if (e instanceof Period) {
        Period p = (Period) e;
        x.addText(!p.hasStart() ? "??" : p.getStartElement().toHumanDisplay());
        x.addText(" --> ");
        x.addText(!p.hasEnd() ? "(ongoing)" : p.getEndElement().toHumanDisplay());
    } else if (e instanceof Reference) {
        Reference r = (Reference) e;
        XhtmlNode c = x;
        ResourceWithReference tr = null;
        if (r.hasReferenceElement()) {
            tr = resolveReference(res, r.getReference());
            if (!r.getReference().startsWith("#")) {
                if (tr != null && tr.getReference() != null)
                    c = x.addTag("a").attribute("href", tr.getReference());
                else
                    c = x.addTag("a").attribute("href", r.getReference());
            }
        }
        // what to display: if text is provided, then that. if the reference was resolved, then show the generated narrative
        if (r.hasDisplayElement()) {
            c.addText(r.getDisplay());
            if (tr != null) {
                c.addText(". Generated Summary: ");
                generateResourceSummary(c, tr.getResource(), true, r.getReference().startsWith("#"));
            }
        } else if (tr != null) {
            generateResourceSummary(c, tr.getResource(), r.getReference().startsWith("#"), r.getReference().startsWith("#"));
        } else {
            c.addText(r.getReference());
        }
    } else if (e instanceof Resource) {
        return;
    } else if (e instanceof ElementDefinition) {
        x.addText("todo-bundle");
    } else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta))
        throw new NotImplementedException("type " + e.getClass().getName() + " not handled yet");
}
Also used : Meta(org.hl7.fhir.dstu2016may.model.Meta) Base64(org.apache.commons.codec.binary.Base64) Address(org.hl7.fhir.dstu2016may.model.Address) StringType(org.hl7.fhir.dstu2016may.model.StringType) NotImplementedException(org.apache.commons.lang3.NotImplementedException) Attachment(org.hl7.fhir.dstu2016may.model.Attachment) UriType(org.hl7.fhir.dstu2016may.model.UriType) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode) HumanName(org.hl7.fhir.dstu2016may.model.HumanName) ContactPoint(org.hl7.fhir.dstu2016may.model.ContactPoint) Identifier(org.hl7.fhir.dstu2016may.model.Identifier) Coding(org.hl7.fhir.dstu2016may.model.Coding) Narrative(org.hl7.fhir.dstu2016may.model.Narrative) SampledData(org.hl7.fhir.dstu2016may.model.SampledData) Ratio(org.hl7.fhir.dstu2016may.model.Ratio) ElementDefinition(org.hl7.fhir.dstu2016may.model.ElementDefinition) InstantType(org.hl7.fhir.dstu2016may.model.InstantType) Enumeration(org.hl7.fhir.dstu2016may.model.Enumeration) Reference(org.hl7.fhir.dstu2016may.model.Reference) BooleanType(org.hl7.fhir.dstu2016may.model.BooleanType) Resource(org.hl7.fhir.dstu2016may.model.Resource) DomainResource(org.hl7.fhir.dstu2016may.model.DomainResource) Quantity(org.hl7.fhir.dstu2016may.model.Quantity) Period(org.hl7.fhir.dstu2016may.model.Period) Range(org.hl7.fhir.dstu2016may.model.Range) Base(org.hl7.fhir.dstu2016may.model.Base) Annotation(org.hl7.fhir.dstu2016may.model.Annotation) IdType(org.hl7.fhir.dstu2016may.model.IdType) Extension(org.hl7.fhir.dstu2016may.model.Extension) DateTimeType(org.hl7.fhir.dstu2016may.model.DateTimeType) CodeType(org.hl7.fhir.dstu2016may.model.CodeType) EventTiming(org.hl7.fhir.dstu2016may.model.Timing.EventTiming) Timing(org.hl7.fhir.dstu2016may.model.Timing) Base64BinaryType(org.hl7.fhir.dstu2016may.model.Base64BinaryType) CodeableConcept(org.hl7.fhir.dstu2016may.model.CodeableConcept)

Aggregations

XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)80 FHIRException (org.hl7.fhir.exceptions.FHIRException)40 IOException (java.io.IOException)34 NotImplementedException (org.apache.commons.lang3.NotImplementedException)30 UnsupportedEncodingException (java.io.UnsupportedEncodingException)27 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)23 Test (org.junit.Test)22 MethodOutcome (ca.uhn.fhir.rest.api.MethodOutcome)19 ArrayList (java.util.ArrayList)19 XhtmlParser (org.hl7.fhir.utilities.xhtml.XhtmlParser)17 Narrative (org.hl7.fhir.r4.model.Narrative)15 Narrative (org.hl7.fhir.r5.model.Narrative)15 StructureDefinition (org.hl7.fhir.r5.model.StructureDefinition)14 XhtmlComposer (org.hl7.fhir.utilities.xhtml.XhtmlComposer)14 GET (javax.ws.rs.GET)12 Path (javax.ws.rs.Path)12 Produces (javax.ws.rs.Produces)12 IBaseOperationOutcome (org.hl7.fhir.instance.model.api.IBaseOperationOutcome)12 FileNotFoundException (java.io.FileNotFoundException)10 LinkedHashMap (java.util.LinkedHashMap)10