Examples with StructureDefinition org.hl7.fhir.r4b.model.StructureDefinition used on opensource projects

Example 76 with StructureDefinition

use of org.hl7.fhir.r4b.model.StructureDefinition in project kindling by HL7.

the class ImplementationGuideDefn method findLogicalPage.

private boolean findLogicalPage(String n, String type, List<LinkTriple> res, List<ImplementationGuideDefinitionPageComponent> page) throws Exception {
    // see if we can find it as an example of an existing profile
    String src = Utilities.fileTitle(n) + ".html";
    for (ImplementationGuideDefinitionResourceComponent r : ig.getDefinition().getResource()) {
        if (src.equals(r.getReference().getReference())) {
            if (r.hasExampleCanonicalType()) {
                String psrc = r.getExampleCanonicalType().getValueAsString().substring(r.getExampleCanonicalType().getValueAsString().lastIndexOf("/") + 1) + ".html";
                if (findPage(psrc, res, page)) {
                    res.add(new LinkTriple(null, r.getName(), null));
                    return true;
                }
            }
        }
    }
    // now, see if we can find a registry to make it a child of
    String id = Utilities.fileTitle(n);
    for (Example e : examples) {
        if (e.getId().equals(id))
            if (findRegistryPage(e.getResourceName(), res, page)) {
                res.add(new LinkTriple(null, e.getName(), null));
                return true;
            }
    }
    if (type.startsWith("profile:"))
        if (findRegistryPage("StructureDefinition", res, page)) {
            res.add(new LinkTriple(null, "Profile", null));
            return true;
        }
    if (findModified(n, "-operations.html", "Operations", res, page))
        return true;
    if (findModified(n, "-questionnaire.html", "Questionnaire", res, page))
        return true;
    if (findModified(n, ".profile.html", "StructureDefinition", res, page))
        return true;
    return false;
}

Example 77 with StructureDefinition

use of org.hl7.fhir.r4b.model.StructureDefinition in project kindling by HL7.

the class Publisher method genTypeProfile.

private void genTypeProfile(TypeDefn t) throws Exception {
    StructureDefinition profile;
    try {
        profile = new ProfileGenerator(page.getDefinitions(), page.getWorkerContext(), page, page.getGenDate(), page.getVersion(), dataElements, fpUsages, page.getFolders().rootDir, page.getUml(), page.getRc()).generate(t);
        page.getProfiles().see(profile, page.packageInfo());
        t.setProfile(profile);
        DataTypeTableGenerator dtg = new DataTypeTableGenerator(page.getFolders().dstDir, page, t.getName(), true, page.getVersion());
        t.getProfile().getText().setDiv(new XhtmlNode(NodeType.Element, "div"));
        t.getProfile().getText().getDiv().getChildNodes().add(dtg.generate(t, null, false));
    } catch (Exception e) {
        throw new Exception("Error generating profile for '" + t.getName() + "': " + e.getMessage(), e);
    }
}

Example 78 with StructureDefinition

use of org.hl7.fhir.r4b.model.StructureDefinition in project kindling by HL7.

the class Publisher method produceTypeProfile.

private void produceTypeProfile(TypeDefn type) throws Exception {
    // ProfileDefn p = new ProfileDefn();
    // p.putMetadata("id", type.getName());
    // p.putMetadata("name", "Basic StructureDefinition for " + type.getName());
    // p.putMetadata("author.name", "FHIR Specification");
    // p.putMetadata("author.ref", "http://hl7.org/fhir");
    // p.putMetadata("description", "Basic StructureDefinition for " + type.getName() + " for validation support");
    // p.putMetadata("status", "draft");
    // p.putMetadata("date", new SimpleDateFormat("yyyy-MM-dd", new Locale("en", "US")).format(new Date()));
    // p.getElements().add(type);
    // ProfileGenerator pgen = new ProfileGenerator(page.getDefinitions());
    // String fn = "type-" + type.getName() + ".profile.xml";
    // StructureDefinition rp = pgen.generate(p, "type-" + type.getName() + ".profile", "<div>Type definition for " + type.getName() + " from <a href=\"http://hl7.org/fhir/datatypes.html#" + type.getName()
    // + "\">FHIR Specification</a></div>");
    String fn = type.getName().toLowerCase() + ".profile.xml";
    StructureDefinition rp = type.getProfile();
    FileOutputStream s = new FileOutputStream(page.getFolders().dstDir + fn);
    new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(s, rp);
    s.close();
    s = new FileOutputStream(page.getFolders().dstDir + Utilities.changeFileExt(fn, ".canonical.xml"));
    new XmlParser().setOutputStyle(OutputStyle.CANONICAL).compose(s, rp);
    s.close();
    s = new FileOutputStream(page.getFolders().dstDir + Utilities.changeFileExt(fn, ".json"));
    new JsonParser().setOutputStyle(OutputStyle.PRETTY).compose(s, rp);
    s.close();
    s = new FileOutputStream(page.getFolders().dstDir + Utilities.changeFileExt(fn, ".canonical.json"));
    new JsonParser().setOutputStyle(OutputStyle.CANONICAL).compose(s, rp);
    s.close();
    Utilities.copyFile(new CSFile(page.getFolders().dstDir + fn), new CSFile(Utilities.path(page.getFolders().dstDir, "examples", fn)));
    addToResourceFeed(rp, page.getTypeBundle(), fn);
    // saveAsPureHtml(rp, new FileOutputStream(page.getFolders().dstDir+ "html"
    // + File.separator + "datatypes.html"));
    cloneToXhtml(type.getName().toLowerCase() + ".profile", "StructureDefinition for " + type.getName(), false, "profile-instance:type:" + type.getName(), "Type", null, wg("mnm"));
    jsonToXhtml(type.getName().toLowerCase() + ".profile", "StructureDefinition for " + type.getName(), resource2Json(rp), "profile-instance:type:" + type.getName(), "Type", null, wg("mnm"));
    ttlToXhtml(type.getName().toLowerCase() + ".profile", "StructureDefinition for " + type.getName(), resource2Ttl(rp), "profile-instance:type:" + type.getName(), "Type", null, wg("mnm"));
    String shex = new ShExGenerator(page.getWorkerContext()).generate(HTMLLinkPolicy.NONE, rp);
    TextFile.stringToFile(shex, Utilities.changeFileExt(page.getFolders().dstDir + fn, ".shex"));
    shexToXhtml(type.getName().toLowerCase(), "ShEx statement for " + type.getName(), shex, "profile-instance:type:" + type.getName(), "Type", null, wg("mnm"));
}

Example 79 with StructureDefinition

use of org.hl7.fhir.r4b.model.StructureDefinition in project kindling by HL7.

the class JsonSpecGenerator method generateCoreElem.

@SuppressWarnings("rawtypes")
private void generateCoreElem(List<ElementDefinition> elements, ElementDefinition elem, int indent, String pathName, boolean asValue, TypeRefComponent type, boolean last, boolean complex) throws Exception {
    if (elem.getPath().endsWith(".id"))
        return;
    if (!complex && elem.getPath().endsWith(".extension"))
        return;
    if (elem.getMax().equals("0"))
        return;
    String indentS = "";
    for (int i = 0; i < indent; i++) {
        indentS += "  ";
    }
    write(indentS);
    List<ElementDefinition> children = getChildren(elements, elem);
    String name = tail(elem.getPath());
    String en = asValue ? "value[x]" : name;
    String tc = type.getWorkingCode();
    if (en.contains("[x]"))
        en = en.replace("[x]", upFirst(tc));
    boolean unbounded = elem.hasMax() && elem.getMax().equals("*");
    // 1. name
    write("\"<a href=\"" + (defPage + "#" + pathName + "." + en) + "\" title=\"" + Utilities.escapeXml(getEnhancedDefinition(elem)) + "\" class=\"dict\"><span style=\"text-decoration: underline\">" + en + "</span></a>\" : ");
    // 2. value
    boolean delayedCloseArray = false;
    if (unbounded)
        write("[");
    if (type == null) {
        // inline definition
        assert (children.size() > 0);
        write("{");
        delayedCloseArray = true;
    } else if (definitions.getPrimitives().containsKey(tc)) {
        if (!(tc.equals("integer") || tc.equals("boolean") || tc.equals("decimal")))
            write("\"");
        if (elem.hasFixed())
            write(Utilities.escapeJson(((PrimitiveType) elem.getFixed()).asStringValue()));
        else
            write("&lt;<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(tc) + ".html#" + tc) + "\">" + tc + "</a></span>&gt;");
        if (!(tc.equals("integer") || tc.equals("boolean") || tc.equals("decimal")))
            write("\"");
    } else {
        write("{ ");
        write("<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(tc) + ".html#" + tc) + "\">" + tc + "</a></span>");
        if (type.hasProfile()) {
            if (type.getProfile().get(0).getValue().startsWith("http://hl7.org/fhir/StructureDefinition/")) {
                String t = type.getProfile().get(0).getValue().substring(40);
                if (definitions.hasType(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(t) + ".html#" + t) + "\">" + t + "</a></span>)");
                else if (definitions.hasResource(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + dtRoot + t.toLowerCase() + ".html\">" + t + "</a></span>)");
                else
                    write("(" + t + ")");
            } else
                write("(" + type.getProfile() + ")");
        }
        if (type.hasTargetProfile()) {
            if (type.getTargetProfile().get(0).getValue().startsWith("http://hl7.org/fhir/StructureDefinition/")) {
                String t = type.getTargetProfile().get(0).getValue().substring(40);
                if (definitions.hasType(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(t) + ".html#" + t) + "\">" + t + "</a></span>)");
                else if (definitions.hasResource(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + dtRoot + t.toLowerCase() + ".html\">" + t + "</a></span>)");
                else
                    write("(" + t + ")");
            } else
                write("(" + type.getTargetProfile() + ")");
        }
        write(" }");
    }
    if (!delayedCloseArray) {
        if (unbounded)
            write("]");
        if (!last)
            write(",");
    }
    write(" <span style=\"color: Gray\">//</span>");
    // 3. optionality
    writeCardinality(elem);
    // 4. doco
    if (!elem.hasFixed()) {
        if (elem.hasBinding() && elem.getBinding().hasValueSet()) {
            ValueSet vs = resolveValueSet(elem.getBinding().getValueSet());
            if (vs != null)
                write("<span style=\"color: navy; opacity: 0.8\"><a href=\"" + (Utilities.isAbsoluteUrl(vs.getUserString("path")) ? "" : prefix) + vs.getUserData("path") + "\" style=\"color: navy\">" + Utilities.escapeXml(elem.getShort()) + "</a></span>");
            else
                write("<span style=\"color: navy; opacity: 0.8\"><a href=\"" + elem.getBinding().getValueSet() + ".html\" style=\"color: navy\">" + Utilities.escapeXml(elem.getShort()) + "</a></span>");
        } else
            write("<span style=\"color: navy; opacity: 0.8\">" + Utilities.escapeXml(elem.getShort()) + "</span>");
    }
    write("\r\n");
    if (delayedCloseArray) {
        int c = 0;
        for (ElementDefinition child : children) {
            if (child.getType().size() == 1)
                generateCoreElem(elements, child, indent + 1, pathName + "." + name, false, child.getType().get(0), ++c == children.size(), false);
            else {
                write("<span style=\"color: Gray\">// value[x]: <span style=\"color: navy; opacity: 0.8\">" + Utilities.escapeXml(child.getShort()) + "</span>. One of these " + Integer.toString(child.getType().size()) + ":</span>\r\n");
                for (TypeRefComponent t : child.getType()) generateCoreElem(elements, child, indent + 1, pathName + "." + name, false, t, ++c == children.size(), false);
            }
        }
        write("}]");
        if (!last)
            write(",");
    }
}

Example 80 with StructureDefinition

use of org.hl7.fhir.r4b.model.StructureDefinition in project kindling by HL7.

the class MappingsGenerator method generate.

public void generate(StructureDefinition profile) throws IOException {
    if (profile.getMapping().isEmpty())
        mappings = "<p>No Mappings</p>";
    else {
        StringBuilder s = new StringBuilder();
        for (StructureDefinitionMappingComponent map : profile.getMapping()) {
            s.append("<a name=\"" + map.getIdentity() + "\"> </a><h3>" + map.getName() + " (" + map.getUri() + ")</h3>");
            if (map.hasComment())
                s.append("<p>" + Utilities.escapeXml(map.getComment()) + "</p>");
            else if (definitions.getMapTypes().containsKey(map.getUri())) {
                XhtmlNode pre = definitions.getMapTypes().get(map.getUri()).getPreamble();
                if (pre != null)
                    s.append(new XhtmlComposer(XhtmlComposer.HTML).compose(pre));
            }
            s.append("<table class=\"grid\">\r\n");
            s.append(" <tr><td colspan=\"3\"><b>" + Utilities.escapeXml(profile.getName()) + "</b></td></tr>\r\n");
            String path = null;
            for (ElementDefinition e : profile.getSnapshot().getElement()) {
                if (path == null || !e.getPath().startsWith(path)) {
                    path = null;
                    if (e.hasMax() && e.getMax().equals("0")) {
                        path = e.getPath() + ".";
                    } else
                        genElement(s, e, map.getIdentity());
                }
            }
            s.append("</table>\r\n");
        }
        mappings = s.toString();
    }
}