use of org.hl7.fhir.r5.context.IWorkerContext.ValidationResult in project org.hl7.fhir.core by hapifhir.
the class InstanceValidator method checkMaxValueSet.
private void checkMaxValueSet(List<ValidationMessage> errors, String path, Element element, StructureDefinition profile, String maxVSUrl, Coding c, NodeStack stack) {
ValueSet valueset = resolveBindingReference(profile, maxVSUrl, profile.getUrl());
if (valueset == null) {
CodeSystem cs = context.fetchCodeSystem(maxVSUrl);
if (rule(errors, IssueType.CODEINVALID, element.line(), element.col(), path, cs == null, I18nConstants.TERMINOLOGY_TX_VALUESET_NOTFOUND_CS, describeReference(maxVSUrl))) {
warning(errors, IssueType.CODEINVALID, element.line(), element.col(), path, valueset != null, I18nConstants.TERMINOLOGY_TX_VALUESET_NOTFOUND, describeReference(maxVSUrl));
}
} else {
try {
long t = System.nanoTime();
ValidationResult vr = checkCodeOnServer(stack, valueset, c, true);
timeTracker.tx(t, "vc " + c.getSystem() + "#" + c.getCode() + " '" + c.getDisplay() + "'");
if (!vr.isOk()) {
if (vr.getErrorClass() != null && vr.getErrorClass().isInfrastructure())
txWarning(errors, vr.getTxLink(), IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_NOVALID_9, describeValueSet(maxVSUrl), vr.getMessage());
else
txRule(errors, vr.getTxLink(), IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_NOVALID_10, describeValueSet(maxVSUrl), c.getSystem(), c.getCode());
}
} catch (Exception e) {
if (STACK_TRACE)
e.printStackTrace();
warning(errors, IssueType.CODEINVALID, element.line(), element.col(), path, false, I18nConstants.TERMINOLOGY_TX_ERROR_CODEABLECONCEPT_MAX, e.getMessage());
}
}
}
use of org.hl7.fhir.r5.context.IWorkerContext.ValidationResult in project org.hl7.fhir.core by hapifhir.
the class ValueSetValidator method validateValueSetIncludeConcept.
private boolean validateValueSetIncludeConcept(List<ValidationMessage> errors, Element concept, NodeStack stack, String system, String version) {
String code = concept.getChildValue("code");
if (version == null) {
ValidationResult vv = context.validateCode(ValidationOptions.defaults(), new Coding(system, code, null), null);
if (vv.getErrorClass() == TerminologyServiceErrorClass.CODESYSTEM_UNSUPPORTED) {
return false;
} else {
boolean ok = vv.isOk();
warning(errors, IssueType.BUSINESSRULE, stack.getLiteralPath(), ok, I18nConstants.VALUESET_INCLUDE_INVALID_CONCEPT_CODE, system, code);
}
} else {
ValidationResult vv = context.validateCode(ValidationOptions.defaults(), new Coding(system, code, null).setVersion(version), null);
if (vv.getErrorClass() == TerminologyServiceErrorClass.CODESYSTEM_UNSUPPORTED) {
return false;
} else {
boolean ok = vv.isOk();
warning(errors, IssueType.BUSINESSRULE, stack.getLiteralPath(), ok, I18nConstants.VALUESET_INCLUDE_INVALID_CONCEPT_CODE_VER, system, version, code);
}
}
return true;
}
use of org.hl7.fhir.r5.context.IWorkerContext.ValidationResult in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method validateOnServer.
private ValidationResult validateOnServer(ValueSet vs, Parameters pin) throws FHIRException {
if (vs != null)
pin.addParameter().setName("valueSet").setResource(vs);
for (ParametersParameterComponent pp : pin.getParameter()) if (pp.getName().equals("profile"))
throw new Error("Can only specify profile in the context");
if (expParameters == null)
throw new Error("No ExpansionProfile provided");
pin.addParameter().setName("profile").setResource(expParameters);
txLog.clearLastId();
Parameters pOut;
if (vs == null)
pOut = txClient.validateCS(pin);
else
pOut = txClient.validateVS(pin);
boolean ok = false;
String message = "No Message returned";
String display = null;
TerminologyServiceErrorClass err = TerminologyServiceErrorClass.UNKNOWN;
for (ParametersParameterComponent p : pOut.getParameter()) {
if (p.getName().equals("result"))
ok = ((BooleanType) p.getValue()).getValue().booleanValue();
else if (p.getName().equals("message"))
message = ((StringType) p.getValue()).getValue();
else if (p.getName().equals("display"))
display = ((StringType) p.getValue()).getValue();
else if (p.getName().equals("cause")) {
try {
IssueType it = IssueType.fromCode(((StringType) p.getValue()).getValue());
if (it == IssueType.UNKNOWN)
err = TerminologyServiceErrorClass.UNKNOWN;
else if (it == IssueType.NOTSUPPORTED)
err = TerminologyServiceErrorClass.VALUESET_UNSUPPORTED;
} catch (FHIRException e) {
}
}
}
if (!ok)
return new ValidationResult(IssueSeverity.ERROR, message, err).setTxLink(txLog.getLastId()).setTxLink(txLog.getLastId());
else if (message != null && !message.equals("No Message returned"))
return new ValidationResult(IssueSeverity.WARNING, message, new ConceptDefinitionComponent().setDisplay(display)).setTxLink(txLog.getLastId()).setTxLink(txLog.getLastId());
else if (display != null)
return new ValidationResult(new ConceptDefinitionComponent().setDisplay(display)).setTxLink(txLog.getLastId()).setTxLink(txLog.getLastId());
else
return new ValidationResult(new ConceptDefinitionComponent()).setTxLink(txLog.getLastId()).setTxLink(txLog.getLastId());
}
use of org.hl7.fhir.r5.context.IWorkerContext.ValidationResult in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method doValidateCode.
public ValidationResult doValidateCode(ValidationOptions options, Coding code, ValueSet vs, boolean implySystem) {
CacheToken cacheToken = txCache != null ? txCache.generateValidationToken(options, code, vs) : null;
ValidationResult res = null;
if (txCache != null)
res = txCache.getValidation(cacheToken);
if (res != null)
return res;
// ok, first we try to validate locally
try {
ValueSetCheckerSimple vsc = new ValueSetCheckerSimple(options, vs, this);
res = vsc.validateCode(code);
if (txCache != null)
txCache.cacheValidation(cacheToken, res, TerminologyCache.TRANSIENT);
return res;
} catch (Exception e) {
}
// if that failed, we try to validate on the server
if (noTerminologyServer)
return new ValidationResult(IssueSeverity.ERROR, "Error validating code: running without terminology services", TerminologyServiceErrorClass.NOSERVICE);
String csumm = txCache != null ? txCache.summary(code) : null;
if (txCache != null)
tlog("$validate " + csumm + " for " + txCache.summary(vs));
else
tlog("$validate " + csumm + " before cache exists");
try {
Parameters pIn = new Parameters();
pIn.addParameter().setName("coding").setValue(code);
if (implySystem)
pIn.addParameter().setName("implySystem").setValue(new BooleanType(true));
if (options != null)
setTerminologyOptions(options, pIn);
res = validateOnServer(vs, pIn);
} catch (Exception e) {
res = new ValidationResult(IssueSeverity.ERROR, e.getMessage() == null ? e.getClass().getName() : e.getMessage()).setTxLink(txLog == null ? null : txLog.getLastId());
}
if (txCache != null)
txCache.cacheValidation(cacheToken, res, TerminologyCache.PERMANENT);
return res;
}
use of org.hl7.fhir.r5.context.IWorkerContext.ValidationResult in project org.hl7.fhir.core by hapifhir.
the class ValueSetCheckerSimple method validateCode.
private ValidationResult validateCode(Coding code, CodeSystem cs) {
ConceptDefinitionComponent cc = cs.hasUserData("tx.cs.special") ? ((SpecialCodeSystem) cs.getUserData("tx.cs.special")).findConcept(code) : findCodeInConcept(cs.getConcept(), code.getCode());
if (cc == null) {
if (cs.getContent() == CodeSystemContentMode.FRAGMENT) {
return new ValidationResult(IssueSeverity.WARNING, context.formatMessage(I18nConstants.UNKNOWN_CODE__IN_FRAGMENT, gen(code), cs.getUrl()));
} else {
return new ValidationResult(IssueSeverity.ERROR, context.formatMessage(I18nConstants.UNKNOWN_CODE__IN_, gen(code), cs.getUrl()));
}
}
if (code.getDisplay() == null) {
return new ValidationResult(code.getSystem(), cc);
}
CommaSeparatedStringBuilder b = new CommaSeparatedStringBuilder();
if (cc.hasDisplay()) {
b.append(cc.getDisplay());
if (code.getDisplay().equalsIgnoreCase(cc.getDisplay())) {
return new ValidationResult(code.getSystem(), cc);
}
}
for (ConceptDefinitionDesignationComponent ds : cc.getDesignation()) {
b.append(ds.getValue());
if (code.getDisplay().equalsIgnoreCase(ds.getValue())) {
return new ValidationResult(code.getSystem(), cc);
}
}
// also check to see if the value set has another display
ConceptReferenceComponent vs = findValueSetRef(code.getSystem(), code.getCode());
if (vs != null && (vs.hasDisplay() || vs.hasDesignation())) {
if (vs.hasDisplay()) {
b.append(vs.getDisplay());
if (code.getDisplay().equalsIgnoreCase(vs.getDisplay())) {
return new ValidationResult(code.getSystem(), cc);
}
}
for (ConceptReferenceDesignationComponent ds : vs.getDesignation()) {
b.append(ds.getValue());
if (code.getDisplay().equalsIgnoreCase(ds.getValue())) {
return new ValidationResult(code.getSystem(), cc);
}
}
}
return new ValidationResult(IssueSeverity.WARNING, context.formatMessage(I18nConstants.DISPLAY_NAME_FOR__SHOULD_BE_ONE_OF__INSTEAD_OF_, code.getSystem(), code.getCode(), b.toString(), code.getDisplay()), code.getSystem(), cc);
}
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