Examples with DateTimeType org.hl7.fhir.r5.model.DateTimeType used on opensource projects

Example 61 with DateTimeType

use of org.hl7.fhir.r5.model.DateTimeType in project eCRNow by drajer-health.

the class CdaFhirUtilities method getXmlForTypeForValueIvlTsEffectiveTime.

public static String getXmlForTypeForValueIvlTsEffectiveTime(String elName, Type dt) {
    String val = "";
    if (dt != null) {
        if (dt instanceof DateTimeType) {
            DateTimeType d = (DateTimeType) dt;
            val += CdaGeneratorUtils.getXmlForEffectiveTime(elName, d.getValue(), d.getTimeZone());
        } else if (dt instanceof Period) {
            Period pt = (Period) dt;
            val += getPeriodXml(pt, elName);
        } else if (dt instanceof Timing) {
            Timing t = (Timing) (dt);
            if (t.getRepeat() != null && t.getRepeat().getBounds() != null) {
                logger.debug("Found the bounds element for creating xml");
            }
        }
        logger.debug("Printing the class name {}", dt.getClass());
        return val;
    }
    return val;
}

Example 62 with DateTimeType

use of org.hl7.fhir.r5.model.DateTimeType in project eCRNow by drajer-health.

the class CdaFhirUtilities method getActualDate.

public static Pair<Date, TimeZone> getActualDate(Type dt) {
    Date d = null;
    TimeZone t = null;
    if (dt instanceof DateTimeType) {
        DateTimeType d1 = (DateTimeType) dt;
        d = d1.getValue();
        t = d1.getTimeZone();
    } else if (dt instanceof Period) {
        logger.debug("Found an instance of period");
        Period d1 = (Period) dt;
        if (d1.getStartElement() != null) {
            d = d1.getStart();
            t = d1.getStartElement().getTimeZone();
        } else if (d1.getEndElement() != null) {
            d = d1.getEnd();
            t = d1.getEndElement().getTimeZone();
        }
    } else if (dt instanceof InstantType) {
        InstantType d1 = (InstantType) dt;
        d = d1.getValue();
        t = d1.getTimeZone();
    } else if (dt instanceof Timing) {
        logger.debug(" Found an instance of timing ");
        Timing tmg = (Timing) (dt);
        if (tmg.getRepeat() != null && tmg.getRepeat().getBounds() != null) {
            logger.debug(" Found the bounds element ");
            return getActualDate(tmg.getRepeat().getBounds());
        }
    }
    return new Pair<>(d, t);
}

Example 63 with DateTimeType

use of org.hl7.fhir.r5.model.DateTimeType in project eCRNow by drajer-health.

the class CdaFhirUtilities method getXmlForType.

public static String getXmlForType(Type dt, String elName, Boolean valFlag) {
    String val = "";
    if (dt != null) {
        if (dt instanceof Coding) {
            Coding cd = (Coding) dt;
            List<Coding> cds = new ArrayList<>();
            cds.add(cd);
            if (!valFlag)
                val += getCodingXml(cds, elName, "");
            else
                val += getCodingXmlForValue(cds, elName);
        } else if (dt instanceof CodeableConcept) {
            CodeableConcept cd = (CodeableConcept) dt;
            List<Coding> cds = cd.getCoding();
            if (!valFlag)
                val += getCodingXml(cds, elName, "");
            else
                val += getCodingXmlForValue(cds, elName);
        } else if (dt instanceof Quantity) {
            Quantity qt = (Quantity) dt;
            val += getQuantityXml(qt, elName, valFlag);
        } else if (dt instanceof DateTimeType) {
            DateTimeType d = (DateTimeType) dt;
            val += CdaGeneratorUtils.getXmlForEffectiveTime(elName, d.getValue(), d.getTimeZone());
        } else if (dt instanceof Period) {
            Period pt = (Period) dt;
            val += getPeriodXml(pt, elName);
        } else if (dt instanceof Timing) {
            Timing t = (Timing) (dt);
            if (t.getRepeat() != null && t.getRepeat().getBounds() != null) {
                logger.debug("Found the bounds element for creating xml");
                String v = getXmlForType(t.getRepeat().getBounds(), elName, valFlag);
                val += v;
            }
        } else if (dt instanceof CodeType) {
            CodeType cd = (CodeType) dt;
            if (!valFlag)
                val += CdaGeneratorUtils.getXmlForCD(elName, cd.getCode());
            else
                val += CdaGeneratorUtils.getXmlForValueString(cd.getCode());
        } else if (dt instanceof StringType) {
            StringType st = (StringType) dt;
            if (!valFlag)
                val += CdaGeneratorUtils.getXmlForText(elName, st.getValue());
            else
                val += CdaGeneratorUtils.getXmlForValueString(st.getValue());
        }
        logger.debug("Printing the class name {}", dt.getClass());
        return val;
    }
    if (!valFlag)
        val += CdaGeneratorUtils.getNFXMLForElement(elName, CdaGeneratorConstants.NF_NI);
    else
        val += CdaGeneratorUtils.getNFXmlForValueString(CdaGeneratorConstants.NF_NI);
    return val;
}

Example 64 with DateTimeType

use of org.hl7.fhir.r5.model.DateTimeType in project eCRNow by drajer-health.

the class CdaHeaderGenerator method getPatientDetails.

public static String getPatientDetails(Patient p, LaunchDetails details) {
    StringBuilder patientDetails = new StringBuilder();
    patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.RECORD_TARGET_EL_NAME));
    patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.PATIENT_ROLE_EL_NAME));
    List<Identifier> ids = CdaFhirUtilities.getIdentifierForType(p.getIdentifier(), CdaFhirEnumConstants.FHIR_ID_TYPE_MR);
    Boolean addOnce = true;
    if (ids != null && !ids.isEmpty()) {
        for (Identifier id : ids) {
            if (!StringUtils.isEmpty(id.getSystem()) && !StringUtils.isEmpty(id.getValue())) {
                logger.debug("Found Identifier with Type MR");
                String system = CdaGeneratorUtils.getRootOid(id.getSystem(), details.getAssigningAuthorityId());
                patientDetails.append(CdaGeneratorUtils.getXmlForII(system, id.getValue()));
            } else {
                logger.debug("Using Resource Identifier as id");
                if (addOnce) {
                    patientDetails.append(CdaGeneratorUtils.getXmlForII(details.getAssigningAuthorityId(), p.getId()));
                    addOnce = false;
                }
            }
        }
    } else {
        logger.debug("Using Resource Identifier as id");
        patientDetails.append(CdaGeneratorUtils.getXmlForII(details.getAssigningAuthorityId(), p.getId()));
    }
    // Add Address.
    patientDetails.append(CdaFhirUtilities.getAddressXml(p.getAddress()));
    // Add Telecom (Phone)
    patientDetails.append(CdaFhirUtilities.getTelecomXml(p.getTelecom(), false));
    // Add Telecom (Email)
    patientDetails.append(CdaFhirUtilities.getEmailXml(p.getTelecom()));
    // Add patient
    patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.PATIENT_EL_NAME));
    patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.NAME_EL_NAME));
    patientDetails.append(CdaFhirUtilities.getNameXml(p.getName()));
    patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.NAME_EL_NAME));
    patientDetails.append(CdaFhirUtilities.getGenderXml(p.getGenderElement().getValue()));
    patientDetails.append(CdaFhirUtilities.getDateTypeXml(p.getBirthDateElement(), CdaGeneratorConstants.BIRTH_TIME_EL_NAME));
    if (p.getDeceased() == null || (p.getDeceased() != null && p.getDeceased().isEmpty())) {
        patientDetails.append(CdaGeneratorUtils.getXmlForValue(CdaGeneratorConstants.SDTC_DECEASED_IND, CdaGeneratorConstants.CCDA_FALSE));
    } else {
        patientDetails.append(CdaGeneratorUtils.getXmlForValue(CdaGeneratorConstants.SDTC_DECEASED_IND, CdaGeneratorConstants.CCDA_TRUE));
        if (p.getDeceased() instanceof DateTimeType) {
            DateTimeType d = (DateTimeType) p.getDeceased();
            patientDetails.append(CdaFhirUtilities.getDateTimeTypeXml(d, CdaGeneratorConstants.SDTC_DECEASED_TIME));
        } else {
            patientDetails.append(CdaGeneratorUtils.getXmlForNullEffectiveTime(CdaGeneratorConstants.SDTC_DECEASED_TIME, CdaGeneratorConstants.NF_NI));
        }
    }
    Coding race = CdaFhirUtilities.getCodingExtension(p.getExtension(), CdaGeneratorConstants.FHIR_USCORE_RACE_EXT_URL, CdaGeneratorConstants.OMB_RACE_CATEGORY_URL);
    if (race != null && race.getCode() != null) {
        patientDetails.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.RACE_CODE_EL_NAME, race.getCode(), CdaGeneratorConstants.RACE_CODE_SYSTEM, CdaGeneratorConstants.RACE_CODE_SYSTEM_NAME, race.getDisplay()));
    } else {
        patientDetails.append(CdaGeneratorUtils.getXmlForNullCD(CdaGeneratorConstants.RACE_CODE_EL_NAME, CdaGeneratorConstants.NF_NI));
    }
    Coding ethnicity = CdaFhirUtilities.getCodingExtension(p.getExtension(), CdaGeneratorConstants.FHIR_USCORE_ETHNICITY_EXT_URL, CdaGeneratorConstants.OMB_RACE_CATEGORY_URL);
    if (ethnicity != null && ethnicity.getCode() != null) {
        patientDetails.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.ETHNIC_CODE_EL_NAME, ethnicity.getCode(), CdaGeneratorConstants.RACE_CODE_SYSTEM, CdaGeneratorConstants.RACE_CODE_SYSTEM_NAME, ethnicity.getDisplay()));
    } else {
        patientDetails.append(CdaGeneratorUtils.getXmlForNullCD(CdaGeneratorConstants.ETHNIC_CODE_EL_NAME, CdaGeneratorConstants.NF_NI));
    }
    // Adding Guardian
    if (p.getContact() != null && !p.getContact().isEmpty()) {
        ContactComponent guardianContact = CdaFhirUtilities.getGuardianContact(p.getContact());
        if (guardianContact != null) {
            patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.GUARDIAN_EL_NAME));
            // Add address if found
            if (guardianContact.getAddress() != null) {
                logger.debug("Adding Address for Guardian");
                List<Address> addrs = new ArrayList<>();
                addrs.add(guardianContact.getAddress());
                patientDetails.append(CdaFhirUtilities.getAddressXml(addrs));
            }
            // Add Telecom
            patientDetails.append(CdaFhirUtilities.getTelecomXml(guardianContact.getTelecom(), false));
            patientDetails.append(CdaFhirUtilities.getEmailXml(guardianContact.getTelecom()));
            patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.GUARDIAN_PERSON_EL_NAME));
            patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.NAME_EL_NAME));
            List<HumanName> names = new ArrayList<>();
            names.add(guardianContact.getName());
            patientDetails.append(CdaFhirUtilities.getNameXml(names));
            patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.NAME_EL_NAME));
            patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.GUARDIAN_PERSON_EL_NAME));
            patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.GUARDIAN_EL_NAME));
        }
    }
    patientDetails.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.LANGUAGE_COMM_EL_NAME));
    Coding language = CdaFhirUtilities.getLanguageForCodeSystem(p.getCommunication(), CdaGeneratorConstants.FHIR_LANGUAGE_CODESYSTEM_URL);
    if (language != null && language.getCode() != null) {
        patientDetails.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.LANGUAGE_CODE_EL_NAME, language.getCode()));
    } else {
        patientDetails.append(CdaGeneratorUtils.getXmlForNullCD(CdaGeneratorConstants.LANGUAGE_CODE_EL_NAME, CdaGeneratorConstants.NF_NI));
    }
    patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.LANGUAGE_COMM_EL_NAME));
    patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.PATIENT_EL_NAME));
    patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.PATIENT_ROLE_EL_NAME));
    patientDetails.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.RECORD_TARGET_EL_NAME));
    return patientDetails.toString();
}

Example 65 with DateTimeType

use of org.hl7.fhir.r5.model.DateTimeType in project nia-patient-switching-standard-adaptor by NHSDigital.

the class MedicationStatementMapperTest method When_MappingPrescribeResourceWithNoOptionals_Expect_AllFieldsToBeMappedCorrectly.

@Test
public void When_MappingPrescribeResourceWithNoOptionals_Expect_AllFieldsToBeMappedCorrectly() {
    var ehrExtract = unmarshallEhrExtract("ehrExtract3.xml");
    var medicationStatement = unmarshallMedicationStatement("medicationStatementAuthoriseAllOptionals_MedicationStatement.xml");
    var authorise = medicationStatement.getComponent().stream().filter(RCMRMT030101UK04Component2::hasEhrSupplyAuthorise).map(RCMRMT030101UK04Component2::getEhrSupplyAuthorise).findFirst();
    when(medicationMapper.extractMedicationReference(any())).thenReturn(Optional.of(new Reference(new IdType(ResourceType.Medication.name(), MEDICATION_ID))));
    assertThat(authorise.isPresent()).isTrue();
    var medicationStatement1 = medicationStatementMapper.mapToMedicationStatement(ehrExtract, medicationStatement, authorise.get(), PRACTISE_CODE, new DateTimeType());
    var lastIssuedDate = medicationStatement1.getExtensionsByUrl("https://fhir.nhs.uk/STU3/StructureDefinition/Extension-CareConnect-GPC-MedicationStatementLastIssueDate-1");
    assertThat(lastIssuedDate.size()).isEqualTo(1);
    var dateTime = (DateTimeType) lastIssuedDate.get(0).getValue();
    assertThat(dateTime.getValue()).isEqualTo(DateFormatUtil.parseToDateTimeType("20060428").getValue());
    var prescribingAgency = medicationStatement1.getExtensionsByUrl("https://fhir.nhs.uk/STU3/StructureDefinition/Extension-CareConnect-GPC-PrescribingAgency-1");
    assertThat(prescribingAgency.size()).isEqualTo(1);
    assertThat(medicationStatement1.getBasedOnFirstRep().getReferenceElement().getIdPart()).isEqualTo(TEST_ID);
    assertThat(medicationStatement1.getStatus()).isEqualTo(ACTIVE);
    assertThat(medicationStatement1.getMedicationReference().getReferenceElement().getIdPart()).isEqualTo(MEDICATION_ID);
    assertThat(medicationStatement1.getTaken()).isEqualTo(UNK);
    assertThat(medicationStatement1.getDosageFirstRep().getText()).isEqualTo(TAKE_ONE_DAILY);
}