Examples with Patient org.hl7.fhir.r5.model.Patient used on opensource projects

Example 26 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class R4PatientResourceProviderIT method readExistingPatient.

/**
 * Verifies that {@link
 * gov.cms.bfd.server.war.r4.providers.R4PatientResourceProvider#read(org.hl7.fhir.r4.model.IdType)}
 * works as expected for a {@link Patient} that does exist in the DB.
 */
@Test
public void readExistingPatient() {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClientV2();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    Patient patient = fhirClient.read().resource(Patient.class).withId(beneficiary.getBeneficiaryId()).execute();
    comparePatient(beneficiary, patient);
}

Example 27 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class ExplanationOfBenefitResourceProviderIT method searchForEobsByExistingPatientWithPageSizeZero.

/**
 * Verifies that {@link ExplanationOfBenefitResourceProvider#findByPatient} works as expected for
 * a {@link Patient} that does exist in the DB, with paging on a page size of 0.
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void searchForEobsByExistingPatientWithPageSizeZero() throws FHIRException {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClient();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    /*
     * FIXME: According the the FHIR spec, paging for _count=0 should not return any
     * claim entries in the bundle, but instead just a total for the number of
     * entries that match the search criteria. This functionality does no work
     * currently (see https://github.com/jamesagnew/hapi-fhir/issues/1074) and so
     * for now paging with _count=0 should behave as though paging was not
     * requested.
     */
    Bundle searchResults = fhirClient.search().forResource(ExplanationOfBenefit.class).where(ExplanationOfBenefit.PATIENT.hasId(TransformerUtils.buildPatientId(beneficiary))).count(0).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    /*
     * Verify the bundle contains a key for total and that the value matches the
     * number of entries in the bundle
     */
    assertEquals(loadedRecords.stream().filter(r -> !(r instanceof Beneficiary)).filter(r -> !(r instanceof BeneficiaryHistory)).filter(r -> !(r instanceof MedicareBeneficiaryIdHistory)).count(), searchResults.getTotal());
    /*
     * Verify that no paging links exist in the bundle.
     */
    assertNull(searchResults.getLink(Constants.LINK_NEXT));
    assertNull(searchResults.getLink(Constants.LINK_PREVIOUS));
    assertNull(searchResults.getLink(Constants.LINK_FIRST));
    assertNull(searchResults.getLink(Constants.LINK_LAST));
    /*
     * Verify that each of the expected claims (one for every claim type) is present
     * and looks correct.
     */
    CarrierClaim carrierClaim = loadedRecords.stream().filter(r -> r instanceof CarrierClaim).map(r -> (CarrierClaim) r).findFirst().get();
    assertEquals(1, filterToClaimType(searchResults, ClaimType.CARRIER).size());
    CarrierClaimTransformerTest.assertMatches(carrierClaim, filterToClaimType(searchResults, ClaimType.CARRIER).get(0), Optional.empty());
    DMEClaim dmeClaim = loadedRecords.stream().filter(r -> r instanceof DMEClaim).map(r -> (DMEClaim) r).findFirst().get();
    DMEClaimTransformerTest.assertMatches(dmeClaim, filterToClaimType(searchResults, ClaimType.DME).get(0), Optional.empty());
    HHAClaim hhaClaim = loadedRecords.stream().filter(r -> r instanceof HHAClaim).map(r -> (HHAClaim) r).findFirst().get();
    HHAClaimTransformerTest.assertMatches(hhaClaim, filterToClaimType(searchResults, ClaimType.HHA).get(0));
    HospiceClaim hospiceClaim = loadedRecords.stream().filter(r -> r instanceof HospiceClaim).map(r -> (HospiceClaim) r).findFirst().get();
    HospiceClaimTransformerTest.assertMatches(hospiceClaim, filterToClaimType(searchResults, ClaimType.HOSPICE).get(0));
    InpatientClaim inpatientClaim = loadedRecords.stream().filter(r -> r instanceof InpatientClaim).map(r -> (InpatientClaim) r).findFirst().get();
    InpatientClaimTransformerTest.assertMatches(inpatientClaim, filterToClaimType(searchResults, ClaimType.INPATIENT).get(0));
    OutpatientClaim outpatientClaim = loadedRecords.stream().filter(r -> r instanceof OutpatientClaim).map(r -> (OutpatientClaim) r).findFirst().get();
    OutpatientClaimTransformerTest.assertMatches(outpatientClaim, filterToClaimType(searchResults, ClaimType.OUTPATIENT).get(0));
    PartDEvent partDEvent = loadedRecords.stream().filter(r -> r instanceof PartDEvent).map(r -> (PartDEvent) r).findFirst().get();
    PartDEventTransformerTest.assertMatches(partDEvent, filterToClaimType(searchResults, ClaimType.PDE).get(0));
    SNFClaim snfClaim = loadedRecords.stream().filter(r -> r instanceof SNFClaim).map(r -> (SNFClaim) r).findFirst().get();
    SNFClaimTransformerTest.assertMatches(snfClaim, filterToClaimType(searchResults, ClaimType.SNF).get(0));
}

Example 28 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class TransformerUtilsTest method createCodeableConcept_display.

/**
 * Verifies that {@link
 * gov.cms.bfd.server.war.stu3.providers.TransformerUtils#createCodeableConcept(org.hl7.fhir.instance.model.api.IAnyResource,
 * CcwCodebookVariable, String)} sets {@link Coding#getDisplay()} correctly.
 */
@Test
public void createCodeableConcept_display() {
    Patient patientA = new Patient();
    patientA.setId("12345");
    CodeableConcept raceConcept_4 = TransformerUtils.createCodeableConcept(patientA, CcwCodebookVariable.RACE, "4");
    assertEquals("Asian", raceConcept_4.getCodingFirstRep().getDisplay());
    // This code isn't valid and shouldn't end up with a matching display.
    CodeableConcept raceConcept_12 = TransformerUtils.createCodeableConcept(patientA, CcwCodebookVariable.RACE, "12");
    assertNull(raceConcept_12.getCodingFirstRep().getDisplay());
    /*
     * The REV_CNTR_PMT_MTHD_IND_CD Variable has value collisions. Verify that those
     * are handled correctly.
     */
    CodeableConcept paymentMethodConcept_1 = TransformerUtils.createCodeableConcept(patientA, CcwCodebookVariable.REV_CNTR_PMT_MTHD_IND_CD, "1");
    assertNull(paymentMethodConcept_1.getCodingFirstRep().getDisplay());
}

Example 29 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class PatientResourceProviderIT method readExistingPatientWithNoHistoryIncludeIdentifiersTrue.

/**
 * Verifies that {@link
 * gov.cms.bfd.server.war.stu3.providers.PatientResourceProvider#read(org.hl7.fhir.dstu3.model.IdType)}
 * works as expected for a {@link Patient} that does exist in the DB but has no {@link
 * BeneficiaryHistory} or {@link MedicareBeneficiaryIdHistory} records when include identifiers
 * value = ["true"].
 */
@Test
public void readExistingPatientWithNoHistoryIncludeIdentifiersTrue() {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResource.SAMPLE_A_BENES));
    RequestHeaders requestHeader = RequestHeaders.getHeaderWrapper(PatientResourceProvider.HEADER_NAME_INCLUDE_IDENTIFIERS, "true", PatientResourceProvider.HEADER_NAME_INCLUDE_ADDRESS_FIELDS, "true");
    IGenericClient fhirClient = createFhirClient(requestHeader);
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    Patient patient = fhirClient.read().resource(Patient.class).withId(beneficiary.getBeneficiaryId()).execute();
    assertNotNull(patient);
    BeneficiaryTransformerTest.assertMatches(beneficiary, patient, requestHeader);
    /*
     * Ensure the unhashed values for HICN and MBI are present.
     */
    Boolean hicnUnhashedPresent = false;
    Boolean mbiUnhashedPresent = false;
    Iterator<Identifier> identifiers = patient.getIdentifier().iterator();
    while (identifiers.hasNext()) {
        Identifier identifier = identifiers.next();
        if (identifier.getSystem().equals(TransformerConstants.CODING_BBAPI_BENE_HICN_UNHASHED))
            hicnUnhashedPresent = true;
        if (identifier.getSystem().equals(TransformerConstants.CODING_BBAPI_MEDICARE_BENEFICIARY_ID_UNHASHED))
            mbiUnhashedPresent = true;
    }
    assertTrue(hicnUnhashedPresent);
    assertTrue(mbiUnhashedPresent);
}

Example 30 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class ExplanationOfBenefitResourceProviderIT method searchForEobsWithPagingWithNegativePagingParameters.

/**
 * Verifies that {@link ExplanationOfBenefitResourceProvider#findByPatient} works as expected for
 * a {@link Patient} that does exist in the DB, with paging, using negative values for page size
 * and start index parameters. This test expects to receive a BadRequestException, as negative
 * values should result in an HTTP 400.
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void searchForEobsWithPagingWithNegativePagingParameters() throws FHIRException {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClient();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    /*
     * FIXME: At this time we cannot check for negative page size parameters due to
     * the same bug described in
     * https://github.com/jamesagnew/hapi-fhir/issues/1074.
     */
    Bundle searchResults = fhirClient.search().forResource(ExplanationOfBenefit.class).where(ExplanationOfBenefit.PATIENT.hasId(TransformerUtils.buildPatientId(beneficiary))).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    /*
     * Access a created link of this bundle, providing the startIndex but not the
     * pageSize (count).
     */
    assertThrows(InvalidRequestException.class, () -> {
        fhirClient.loadPage().byUrl(searchResults.getLink(Bundle.LINK_SELF).getUrl() + "&startIndex=-1").andReturnBundle(Bundle.class).execute();
    });
}