Examples with Patient org.hl7.fhir.r5.model.Patient used on opensource projects

Example 41 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class ExplanationOfBenefitResourceProviderIT method searchForEobsByExistingPatientWithOddPaging.

/**
 * Verifies that {@link ExplanationOfBenefitResourceProvider#findByPatient} works as expected for
 * a {@link Patient} that does exist in the DB, with paging. This test uses a count of 3 to verify
 * our code will not run into an IndexOutOfBoundsException on even bundle sizes.
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void searchForEobsByExistingPatientWithOddPaging() throws FHIRException {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClient();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    Bundle searchResults = fhirClient.search().forResource(ExplanationOfBenefit.class).where(ExplanationOfBenefit.PATIENT.hasId(TransformerUtils.buildPatientId(beneficiary))).count(3).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    assertEquals(3, searchResults.getEntry().size());
    /*
     * Verify that accessing all next links, eventually leading to the last page,
     * will not encounter an IndexOutOfBoundsException.
     */
    while (searchResults.getLink(Constants.LINK_NEXT) != null) {
        searchResults = fhirClient.loadPage().next(searchResults).execute();
        assertNotNull(searchResults);
        assertTrue(searchResults.hasEntry());
    }
}

Example 42 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class ExplanationOfBenefitResourceProviderIT method searchForEobsByExistingPatientWithPageSizeNotProvided.

/**
 * Verifies that {@link ExplanationOfBenefitResourceProvider#findByPatient} works as expected for
 * a {@link Patient} that does exist in the DB, with paging, providing the startIndex but not the
 * pageSize (count).
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void searchForEobsByExistingPatientWithPageSizeNotProvided() throws FHIRException {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClient();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    Bundle searchResults = fhirClient.search().forResource(ExplanationOfBenefit.class).where(ExplanationOfBenefit.PATIENT.hasId(TransformerUtils.buildPatientId(beneficiary))).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    /*
     * Verify that no paging links exist in the bundle.
     */
    assertNull(searchResults.getLink(Constants.LINK_NEXT));
    assertNull(searchResults.getLink(Constants.LINK_PREVIOUS));
    assertNull(searchResults.getLink(Constants.LINK_FIRST));
    assertNull(searchResults.getLink(Constants.LINK_LAST));
    /*
     * Access a created link of this bundle, providing the startIndex but not the
     * pageSize (count).
     */
    Bundle pagedResults = fhirClient.loadPage().byUrl(searchResults.getLink(Bundle.LINK_SELF).getUrl() + "&startIndex=4").andReturnBundle(Bundle.class).execute();
    assertNotNull(pagedResults);
    /*
     * Verify that paging links exist in this paged bundle.
     */
    assertNull(pagedResults.getLink(Constants.LINK_NEXT));
    assertNotNull(pagedResults.getLink(Constants.LINK_PREVIOUS));
    assertNotNull(pagedResults.getLink(Constants.LINK_FIRST));
    assertNotNull(pagedResults.getLink(Constants.LINK_LAST));
    /*
     * Add the entries in the paged results to a list and verify that only the last
     * 4 entries in the original searchResults were returned in the pagedResults.
     */
    List<IBaseResource> pagedEntries = new ArrayList<>();
    pagedResults.getEntry().forEach(e -> pagedEntries.add(e.getResource()));
    assertEquals(4, pagedEntries.size());
}

Example 43 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class R4PatientResourceProviderIT method searchForExistingPatientByPartDContractNumIncludeIdentifiersFalse.

@Test
public void searchForExistingPatientByPartDContractNumIncludeIdentifiersFalse() {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResource.SAMPLE_A_BENES));
    IGenericClient fhirClient = createFhirClient("mbi, false", "true");
    // Should return a single match
    Bundle searchResults = fhirClient.search().forResource(Patient.class).where(new TokenClientParam("_has:Coverage.extension").exactly().systemAndIdentifier(CCWUtils.calculateVariableReferenceUrl(CcwCodebookVariable.PTDCNTRCT01), "S4607")).where(new TokenClientParam("_has:Coverage.rfrncyr").exactly().systemAndIdentifier(CCWUtils.calculateVariableReferenceUrl(CcwCodebookVariable.RFRNC_YR), "2018")).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    assertEquals(1, searchResults.getEntry().size());
    Patient patientFromSearchResult = (Patient) searchResults.getEntry().get(0).getResource();
    Beneficiary expectedBene = (Beneficiary) loadedRecords.get(0);
    assertEquals(expectedBene.getBeneficiaryId(), patientFromSearchResult.getIdElement().getIdPart());
    /*
     * Ensure the unhashed values for MBI is present.
     */
    Boolean mbiUnhashedPresent = false;
    Iterator<Identifier> identifiers = patientFromSearchResult.getIdentifier().iterator();
    while (identifiers.hasNext()) {
        Identifier identifier = identifiers.next();
        if (identifier.getSystem().equals(TransformerConstants.CODING_BBAPI_MEDICARE_BENEFICIARY_ID_UNHASHED)) {
            mbiUnhashedPresent = true;
        }
    }
    assertTrue(mbiUnhashedPresent);
}

Example 44 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class R4PatientResourceProviderIT method searchForExistingPatientByHistoricalMbiHash.

/**
 * Verifies that {@link
 * gov.cms.bfd.server.war.r4.providers.R4PatientResourceProvider#searchByIdentifier(ca.uhn.fhir.rest.param.TokenParam)}
 * works as expected for MBIs that should be present as a {@link BeneficiaryHistory} record.
 */
@Test
public void searchForExistingPatientByHistoricalMbiHash() {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClientV2();
    loadedRecords.stream().filter(r -> r instanceof BeneficiaryHistory).map(r -> (BeneficiaryHistory) r).forEach(h -> {
        Bundle searchResults = fhirClient.search().forResource(Patient.class).where(Patient.IDENTIFIER.exactly().systemAndIdentifier(TransformerConstants.CODING_BBAPI_BENE_MBI_HASH, h.getMbiHash().get())).returnBundle(Bundle.class).execute();
        assertNotNull(searchResults);
        assertEquals(1, searchResults.getTotal());
        Patient patientFromSearchResult = (Patient) searchResults.getEntry().get(0).getResource();
        assertEquals(h.getBeneficiaryId(), patientFromSearchResult.getIdElement().getIdPart());
    });
}

Example 45 with Patient

use of org.hl7.fhir.r5.model.Patient in project beneficiary-fhir-data by CMSgov.

the class R4PatientResourceProviderIT method assertExistingPatientIncludeIdentifiersExpected.

/**
 * Asserts that {@link
 * gov.cms.bfd.server.war.r4.providers.R4PatientResourceProvider#read(org.hl7.fhir.r4.model.IdType)}
 * contains expected/present identifiers for a {@link Patient}.
 *
 * @param includeIdentifiersValue header value
 * @param expectingMbi true if expecting a MBI
 * @param includeAddressValues header value
 */
public void assertExistingPatientIncludeIdentifiersExpected(boolean expectingMbi, RequestHeaders requestHeader) {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    Patient expected = BeneficiaryTransformerV2.transform(PipelineTestUtils.get().getPipelineApplicationState().getMetrics(), beneficiary, requestHeader);
    IGenericClient fhirClient = createFhirClient(requestHeader);
    Patient patient = fhirClient.read().resource(Patient.class).withId(beneficiary.getBeneficiaryId()).execute();
    // Because of how transform doesn't go through R4PatientResourceProvider, `expected` won't have
    // the historical MBI data.
    // Also, SAMPLE_A does not have mbi history (it used to); however, what used to be denoted as
    // historical
    // is not provided as the 'current' MBI identifier (no historical).
    comparePatient(expected, patient);
    /*
     * Ensure the unhashed values for MBI are present.
     */
    Boolean mbiUnhashedPresent = false;
    Iterator<Identifier> identifiers = patient.getIdentifier().iterator();
    while (identifiers.hasNext()) {
        Identifier identifier = identifiers.next();
        if (identifier.getSystem().equals(TransformerConstants.CODING_BBAPI_BENE_ID)) {
            mbiUnhashedPresent = true;
        }
    }
    // Unhashed MBI should always be present in V2
    assertTrue(mbiUnhashedPresent);
}