Examples with BaseWrapper org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper used on opensource projects

Example 31 with BaseWrapper

use of org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method renderLeaf.

private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints, String path) throws FHIRException, UnsupportedEncodingException, IOException {
    if (ew == null)
        return;
    Base e = ew.getBase();
    if (e instanceof StringType)
        x.addText(((StringType) e).getValue());
    else if (e instanceof CodeType)
        x.addText(((CodeType) e).getValue());
    else if (e instanceof IdType)
        x.addText(((IdType) e).getValue());
    else if (e instanceof Extension)
        return;
    else if (e instanceof InstantType)
        x.addText(((InstantType) e).toHumanDisplay());
    else if (e instanceof DateTimeType)
        x.addText(((DateTimeType) e).toHumanDisplay());
    else if (e instanceof Base64BinaryType)
        x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
    else if (e instanceof org.hl7.fhir.dstu3.model.DateType)
        x.addText(((org.hl7.fhir.dstu3.model.DateType) e).toHumanDisplay());
    else if (e instanceof Enumeration) {
        Object ev = ((Enumeration<?>) e).getValue();
        // todo: look up a display name if there is one
        x.addText(ev == null ? "" : ev.toString());
    } else if (e instanceof BooleanType)
        x.addText(((BooleanType) e).getValue().toString());
    else if (e instanceof CodeableConcept) {
        renderCodeableConcept((CodeableConcept) e, x, showCodeDetails);
    } else if (e instanceof Coding) {
        renderCoding((Coding) e, x, showCodeDetails);
    } else if (e instanceof Annotation) {
        renderAnnotation((Annotation) e, x);
    } else if (e instanceof Identifier) {
        renderIdentifier((Identifier) e, x);
    } else if (e instanceof org.hl7.fhir.dstu3.model.IntegerType) {
        x.addText(Integer.toString(((org.hl7.fhir.dstu3.model.IntegerType) e).getValue()));
    } else if (e instanceof org.hl7.fhir.dstu3.model.DecimalType) {
        x.addText(((org.hl7.fhir.dstu3.model.DecimalType) e).getValue().toString());
    } else if (e instanceof HumanName) {
        renderHumanName((HumanName) e, x);
    } else if (e instanceof SampledData) {
        renderSampledData((SampledData) e, x);
    } else if (e instanceof Address) {
        renderAddress((Address) e, x);
    } else if (e instanceof ContactPoint) {
        renderContactPoint((ContactPoint) e, x);
    } else if (e instanceof UriType) {
        renderUri((UriType) e, x);
    } else if (e instanceof Timing) {
        renderTiming((Timing) e, x);
    } else if (e instanceof Range) {
        renderRange((Range) e, x);
    } else if (e instanceof Quantity) {
        renderQuantity((Quantity) e, x, showCodeDetails);
    } else if (e instanceof Ratio) {
        renderQuantity(((Ratio) e).getNumerator(), x, showCodeDetails);
        x.tx("/");
        renderQuantity(((Ratio) e).getDenominator(), x, showCodeDetails);
    } else if (e instanceof Period) {
        Period p = (Period) e;
        x.addText(!p.hasStart() ? "??" : p.getStartElement().toHumanDisplay());
        x.tx(" --> ");
        x.addText(!p.hasEnd() ? "(ongoing)" : p.getEndElement().toHumanDisplay());
    } else if (e instanceof Reference) {
        Reference r = (Reference) e;
        XhtmlNode c = x;
        ResourceWithReference tr = null;
        if (r.hasReferenceElement()) {
            tr = resolveReference(res, r.getReference());
            if (!r.getReference().startsWith("#")) {
                if (tr != null && tr.getReference() != null)
                    c = x.ah(tr.getReference());
                else
                    c = x.ah(r.getReference());
            }
        }
        // what to display: if text is provided, then that. if the reference was resolved, then show the generated narrative
        if (r.hasDisplayElement()) {
            c.addText(r.getDisplay());
            if (tr != null && tr.getResource() != null) {
                c.tx(". Generated Summary: ");
                generateResourceSummary(c, tr.getResource(), true, r.getReference().startsWith("#"));
            }
        } else if (tr != null && tr.getResource() != null) {
            generateResourceSummary(c, tr.getResource(), r.getReference().startsWith("#"), r.getReference().startsWith("#"));
        } else {
            c.addText(r.getReference());
        }
    } else if (e instanceof Resource) {
        return;
    } else if (e instanceof ElementDefinition) {
        x.tx("todo-bundle");
    } else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta)) {
        StructureDefinition sd = context.fetchTypeDefinition(e.fhirType());
        if (sd == null)
            throw new NotImplementedException("type " + e.getClass().getName() + " not handled yet, and no structure found");
        else
            generateByProfile(res, sd, ew, sd.getSnapshot().getElement(), sd.getSnapshot().getElementFirstRep(), getChildrenForPath(sd.getSnapshot().getElement(), sd.getSnapshot().getElementFirstRep().getPath()), x, path, showCodeDetails);
    }
}

Example 32 with BaseWrapper

use of org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generateByProfile.

private void generateByProfile(ResourceWrapper res, StructureDefinition profile, BaseWrapper e, List<ElementDefinition> allElements, ElementDefinition defn, List<ElementDefinition> children, XhtmlNode x, String path, boolean showCodeDetails, int indent, ResourceContext rc) throws FHIRException, UnsupportedEncodingException, IOException {
    if (children.isEmpty()) {
        renderLeaf(res, e, defn, x, false, showCodeDetails, readDisplayHints(defn), path, indent, rc);
    } else {
        for (PropertyWrapper p : splitExtensions(profile, e.children())) {
            if (p.hasValues()) {
                ElementDefinition child = getElementDefinition(children, path + "." + p.getName(), p);
                if (child != null) {
                    Map<String, String> displayHints = readDisplayHints(child);
                    if (!exemptFromRendering(child)) {
                        List<ElementDefinition> grandChildren = getChildrenForPath(allElements, path + "." + p.getName());
                        filterGrandChildren(grandChildren, path + "." + p.getName(), p);
                        if (p.getValues().size() > 0 && child != null) {
                            if (isPrimitive(child)) {
                                XhtmlNode para = x.para();
                                String name = p.getName();
                                if (name.endsWith("[x]"))
                                    name = name.substring(0, name.length() - 3);
                                if (showCodeDetails || !isDefaultValue(displayHints, p.getValues())) {
                                    para.b().addText(name);
                                    para.tx(": ");
                                    if (renderAsList(child) && p.getValues().size() > 1) {
                                        XhtmlNode list = x.ul();
                                        for (BaseWrapper v : p.getValues()) renderLeaf(res, v, child, list.li(), false, showCodeDetails, displayHints, path, indent, rc);
                                    } else {
                                        boolean first = true;
                                        for (BaseWrapper v : p.getValues()) {
                                            if (first)
                                                first = false;
                                            else
                                                para.tx(", ");
                                            renderLeaf(res, v, child, para, false, showCodeDetails, displayHints, path, indent, rc);
                                        }
                                    }
                                }
                            } else if (canDoTable(path, p, grandChildren)) {
                                x.addTag(getHeader()).addText(Utilities.capitalize(Utilities.camelCase(Utilities.pluralizeMe(p.getName()))));
                                XhtmlNode tbl = x.table("grid");
                                XhtmlNode tr = tbl.tr();
                                // work around problem with empty table rows
                                tr.td().tx("-");
                                addColumnHeadings(tr, grandChildren);
                                for (BaseWrapper v : p.getValues()) {
                                    if (v != null) {
                                        tr = tbl.tr();
                                        // work around problem with empty table rows
                                        tr.td().tx("*");
                                        addColumnValues(res, tr, grandChildren, v, showCodeDetails, displayHints, path, indent, rc);
                                    }
                                }
                            } else {
                                for (BaseWrapper v : p.getValues()) {
                                    if (v != null) {
                                        XhtmlNode bq = x.addTag("blockquote");
                                        bq.para().b().addText(p.getName());
                                        generateByProfile(res, profile, v, allElements, child, grandChildren, bq, path + "." + p.getName(), showCodeDetails, indent + 1, rc);
                                    }
                                }
                            }
                        }
                    }
                }
            }
        }
    }
}

Example 33 with BaseWrapper

use of org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generateDiagnosticReport.

public XhtmlNode generateDiagnosticReport(ResourceWrapper dr) {
    XhtmlNode root = new XhtmlNode(NodeType.Element, "div");
    XhtmlNode h2 = root.h2();
    displayCodeableConcept(h2, getProperty(dr, "code").value());
    h2.tx(" ");
    PropertyWrapper pw = getProperty(dr, "category");
    if (valued(pw)) {
        h2.tx("(");
        displayCodeableConcept(h2, pw.value());
        h2.tx(") ");
    }
    displayDate(h2, getProperty(dr, "issued").value());
    XhtmlNode tbl = root.table("grid");
    XhtmlNode tr = tbl.tr();
    XhtmlNode tdl = tr.td();
    XhtmlNode tdr = tr.td();
    populateSubjectSummary(tdl, getProperty(dr, "subject").value());
    tdr.b().tx("Report Details");
    tdr.br();
    pw = getProperty(dr, "perfomer");
    if (valued(pw)) {
        tdr.addText(pluralise("Performer", pw.getValues().size()) + ":");
        for (BaseWrapper v : pw.getValues()) {
            tdr.tx(" ");
            displayReference(tdr, v);
        }
        tdr.br();
    }
    pw = getProperty(dr, "identifier");
    if (valued(pw)) {
        tdr.addText(pluralise("Identifier", pw.getValues().size()) + ":");
        for (BaseWrapper v : pw.getValues()) {
            tdr.tx(" ");
            displayIdentifier(tdr, v);
        }
        tdr.br();
    }
    pw = getProperty(dr, "request");
    if (valued(pw)) {
        tdr.addText(pluralise("Request", pw.getValues().size()) + ":");
        for (BaseWrapper v : pw.getValues()) {
            tdr.tx(" ");
            displayReferenceId(tdr, v);
        }
        tdr.br();
    }
    pw = getProperty(dr, "result");
    if (valued(pw)) {
        List<ObservationNode> observations = fetchObservations(pw.getValues());
        buildObservationsTable(root, observations);
    }
    pw = getProperty(dr, "conclusion");
    if (valued(pw))
        displayText(root.para(), pw.value());
    pw = getProperty(dr, "result");
    if (valued(pw)) {
        XhtmlNode p = root.para();
        p.b().tx("Coded Diagnoses :");
        for (BaseWrapper v : pw.getValues()) {
            tdr.tx(" ");
            displayCodeableConcept(tdr, v);
        }
    }
    return root;
}

Example 34 with BaseWrapper

use of org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper in project org.hl7.fhir.core by hapifhir.

the class PatientRenderer method display.

@Override
public String display(ResourceWrapper pat) throws UnsupportedEncodingException, IOException {
    Identifier id = null;
    PropertyWrapper pw = getProperty(pat, "identifier");
    for (BaseWrapper t : pw.getValues()) {
        id = chooseId(id, (Identifier) t.getBase());
    }
    pw = getProperty(pat, "name");
    HumanName n = null;
    for (BaseWrapper t : pw.getValues()) {
        n = chooseName(n, (HumanName) t);
    }
    String gender = null;
    pw = getProperty(pat, "gender");
    if (valued(pw)) {
        pw.value().getBase().primitiveValue();
    }
    DateType dt = null;
    pw = getProperty(pat, "birthDate");
    if (valued(pw)) {
        dt = (DateType) pw.value().getBase();
    }
    return display(n, gender, dt, id);
}

Example 35 with BaseWrapper

use of org.hl7.fhir.r5.renderers.utils.BaseWrappers.BaseWrapper in project org.hl7.fhir.core by hapifhir.

the class ProfileDrivenRenderer method generateElementByProfile.

public void generateElementByProfile(ResourceWrapper res, StructureDefinition profile, List<ElementDefinition> allElements, XhtmlNode x, String path, boolean showCodeDetails, int indent, PropertyWrapper p, ElementDefinition child) throws UnsupportedEncodingException, IOException, EOperationOutcome {
    Map<String, String> displayHints = readDisplayHints(child);
    if ("DomainResource.contained".equals(child.getBase().getPath())) {
    // if (p.getValues().size() > 0 && child != null) {
    // for (BaseWrapper v : p.getValues()) {
    // x.an(v.get("id").primitiveValue());
    // }
    // }
    } else if (!exemptFromRendering(child)) {
        if (isExtension(p)) {
            hasExtensions = true;
        }
        List<ElementDefinition> grandChildren = getChildrenForPath(allElements, path + "." + p.getName());
        filterGrandChildren(grandChildren, path + "." + p.getName(), p);
        if (p.getValues().size() > 0) {
            if (isPrimitive(child)) {
                XhtmlNode para = x.isPara() ? para = x : x.para();
                String name = p.getName();
                if (name.endsWith("[x]"))
                    name = name.substring(0, name.length() - 3);
                if (showCodeDetails || !isDefaultValue(displayHints, p.getValues())) {
                    para.b().addText(name);
                    para.tx(": ");
                    if (renderAsList(child) && p.getValues().size() > 1) {
                        XhtmlNode list = x.ul();
                        for (BaseWrapper v : p.getValues()) renderLeaf(res, v, child, x, list.li(), false, showCodeDetails, displayHints, path, indent);
                    } else {
                        boolean first = true;
                        for (BaseWrapper v : p.getValues()) {
                            if (first) {
                                first = false;
                            } else {
                                para.tx(", ");
                            }
                            renderLeaf(res, v, child, x, para, false, showCodeDetails, displayHints, path, indent);
                        }
                    }
                }
            } else if (canDoTable(path, p, grandChildren, x)) {
                XhtmlNode xn = new XhtmlNode(NodeType.Element, getHeader());
                xn.addText(Utilities.capitalize(Utilities.camelCase(Utilities.pluralizeMe(p.getName()))));
                XhtmlNode tbl = new XhtmlNode(NodeType.Element, "table");
                tbl.setAttribute("class", "grid");
                XhtmlNode tr = tbl.tr();
                // work around problem with empty table rows
                tr.td().tx("-");
                boolean add = addColumnHeadings(tr, grandChildren);
                for (BaseWrapper v : p.getValues()) {
                    if (v != null) {
                        tr = tbl.tr();
                        // work around problem with empty table rows
                        tr.td().tx("*");
                        add = addColumnValues(res, tr, grandChildren, v, showCodeDetails, displayHints, path, indent) || add;
                    }
                }
                if (add) {
                    x.add(xn);
                    x.add(tbl);
                }
            } else if (isExtension(p)) {
                for (BaseWrapper v : p.getValues()) {
                    if (v != null) {
                        PropertyWrapper vp = v.getChildByName("value");
                        PropertyWrapper ev = v.getChildByName("extension");
                        if (vp.hasValues()) {
                            BaseWrapper vv = vp.value();
                            XhtmlNode para = x.para();
                            para.b().addText(p.getStructure().present());
                            para.tx(": ");
                            renderLeaf(res, vv, child, x, para, false, showCodeDetails, displayHints, path, indent);
                        } else if (ev.hasValues()) {
                            XhtmlNode bq = x.addTag("blockquote");
                            bq.para().b().addText(isExtension(p) ? p.getStructure().present() : p.getName());
                            for (BaseWrapper vv : ev.getValues()) {
                                StructureDefinition ex = context.getWorker().fetchTypeDefinition("Extension");
                                List<ElementDefinition> children = getChildrenForPath(ex.getSnapshot().getElement(), "Extension");
                                generateByProfile(res, ex, vv, allElements, child, children, bq, "Extension", showCodeDetails, indent + 1);
                            }
                        }
                    }
                }
            } else {
                for (BaseWrapper v : p.getValues()) {
                    if (v != null) {
                        XhtmlNode bq = x.addTag("blockquote");
                        bq.para().b().addText(isExtension(p) ? p.getStructure().present() : p.getName());
                        generateByProfile(res, profile, v, allElements, child, grandChildren, bq, path + "." + p.getName(), showCodeDetails, indent + 1);
                    }
                }
            }
        }
    }
}