Examples with Section org.hl7.fhir.utilities.xml.SchematronWriter.Section used on opensource projects

Example 56 with Section

use of org.hl7.fhir.utilities.xml.SchematronWriter.Section in project org.hl7.fhir.core by hapifhir.

the class BundleRenderer method renderDocument.

private boolean renderDocument(XhtmlNode x, Bundle b) throws UnsupportedEncodingException, FHIRException, IOException, EOperationOutcome {
    // from the spec:
    // 
    // When the document is presented for human consumption, applications SHOULD present the collated narrative portions in order:
    // * The subject resource Narrative
    // * The Composition resource Narrative
    // * The section.text Narratives
    Composition comp = (Composition) b.getEntry().get(0).getResource();
    Resource subject = resolveReference(b, comp.getSubject());
    if (subject != null) {
        XhtmlNode nx = (subject instanceof DomainResource) ? ((DomainResource) subject).getText().getDiv() : null;
        if (nx != null) {
            x.addChildren(nx);
        } else {
            RendererFactory.factory(subject, context).render(x, subject);
        }
    }
    x.hr();
    if (comp.getText().hasDiv()) {
        x.addChildren(comp.getText().getDiv());
        x.hr();
    }
    for (SectionComponent section : comp.getSection()) {
        addSection(x, section, 2, false);
    }
    return false;
}

Example 57 with Section

use of org.hl7.fhir.utilities.xml.SchematronWriter.Section in project org.hl7.fhir.core by hapifhir.

the class TurtleParser method compose.

@Override
public void compose(Element e, OutputStream stream, OutputStyle style, String base) throws Exception {
    this.base = base;
    RdfGenerator ttl = new RdfGenerator(stream);
    // ttl.setFormat(FFormat);
    ttl.prefix("fhir", "http://hl7.org/fhir/");
    ttl.prefix("rdfs", "http://www.w3.org/2000/01/rdf-schema#");
    ttl.prefix("owl", "http://www.w3.org/2002/07/owl#");
    ttl.prefix("xs", "http://www.w3.org/2001/XMLSchema#");
    Section section = ttl.section("resource");
    Subject subject;
    String id = e.getChildValue("id");
    if (base != null && id != null)
        subject = section.triple("<" + base + "/" + e.getType() + "/" + id + ">", "a", "fhir:" + e.getType());
    else
        subject = section.triple("_", "a", "fhir:" + e.getType());
    subject.predicate("fhir:nodeRole", "fhir:treeRoot");
    for (Element child : e.getChildren()) {
        composeElement(subject, child);
    }
    ttl.commit(false);
}

Example 58 with Section

use of org.hl7.fhir.utilities.xml.SchematronWriter.Section in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeComposition.

protected void composeComposition(Complex parent, String parentType, String name, Composition element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeDomainResource(t, "Composition", name, element, index);
    if (element.hasIdentifier())
        composeIdentifier(t, "Composition", "identifier", element.getIdentifier(), -1);
    if (element.hasStatusElement())
        composeEnum(t, "Composition", "status", element.getStatusElement(), -1);
    if (element.hasType())
        composeCodeableConcept(t, "Composition", "type", element.getType(), -1);
    for (int i = 0; i < element.getCategory().size(); i++) composeCodeableConcept(t, "Composition", "category", element.getCategory().get(i), i);
    if (element.hasSubject())
        composeReference(t, "Composition", "subject", element.getSubject(), -1);
    if (element.hasEncounter())
        composeReference(t, "Composition", "encounter", element.getEncounter(), -1);
    if (element.hasDateElement())
        composeDateTime(t, "Composition", "date", element.getDateElement(), -1);
    for (int i = 0; i < element.getAuthor().size(); i++) composeReference(t, "Composition", "author", element.getAuthor().get(i), i);
    if (element.hasTitleElement())
        composeString(t, "Composition", "title", element.getTitleElement(), -1);
    if (element.hasConfidentialityElement())
        composeEnum(t, "Composition", "confidentiality", element.getConfidentialityElement(), -1);
    for (int i = 0; i < element.getAttester().size(); i++) composeCompositionCompositionAttesterComponent(t, "Composition", "attester", element.getAttester().get(i), i);
    if (element.hasCustodian())
        composeReference(t, "Composition", "custodian", element.getCustodian(), -1);
    for (int i = 0; i < element.getRelatesTo().size(); i++) composeCompositionCompositionRelatesToComponent(t, "Composition", "relatesTo", element.getRelatesTo().get(i), i);
    for (int i = 0; i < element.getEvent().size(); i++) composeCompositionCompositionEventComponent(t, "Composition", "event", element.getEvent().get(i), i);
    for (int i = 0; i < element.getSection().size(); i++) composeCompositionSectionComponent(t, "Composition", "section", element.getSection().get(i), i);
}

Example 59 with Section

use of org.hl7.fhir.utilities.xml.SchematronWriter.Section in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateForChildren.

private void generateForChildren(SchematronWriter sch, String xpath, ElementDefinition ed, StructureDefinition structure, StructureDefinition base) throws IOException {
    // generateForChild(txt, structure, child);
    List<ElementDefinition> children = getChildList(structure, ed);
    String sliceName = null;
    ElementDefinitionSlicingComponent slicing = null;
    for (ElementDefinition child : children) {
        String name = tail(child.getPath());
        if (child.hasSlicing()) {
            sliceName = name;
            slicing = child.getSlicing();
        } else if (!name.equals(sliceName))
            slicing = null;
        ElementDefinition based = getByPath(base, child.getPath());
        boolean doMin = (child.getMin() > 0) && (based == null || (child.getMin() != based.getMin()));
        boolean doMax = child.hasMax() && !child.getMax().equals("*") && (based == null || (!child.getMax().equals(based.getMax())));
        Slicer slicer = slicing == null ? new Slicer(true) : generateSlicer(child, slicing, structure);
        if (slicer.check) {
            if (doMin || doMax) {
                Section s = sch.section(xpath);
                Rule r = s.rule(xpath);
                if (doMin)
                    r.assrt("count(f:" + name + slicer.criteria + ") >= " + Integer.toString(child.getMin()), name + slicer.name + ": minimum cardinality of '" + name + "' is " + Integer.toString(child.getMin()));
                if (doMax)
                    r.assrt("count(f:" + name + slicer.criteria + ") <= " + child.getMax(), name + slicer.name + ": maximum cardinality of '" + name + "' is " + child.getMax());
            }
        }
    }
    for (ElementDefinitionConstraintComponent inv : ed.getConstraint()) {
        if (inv.hasXpath()) {
            Section s = sch.section(ed.getPath());
            Rule r = s.rule(xpath);
            r.assrt(inv.getXpath(), (inv.hasId() ? inv.getId() + ": " : "") + inv.getHuman() + (inv.hasUserData(IS_DERIVED) ? " (inherited)" : ""));
        }
    }
    if (!ed.hasContentReference()) {
        for (ElementDefinition child : children) {
            String name = tail(child.getPath());
            generateForChildren(sch, xpath + "/f:" + name, child, structure, base);
        }
    }
}

Example 60 with Section

use of org.hl7.fhir.utilities.xml.SchematronWriter.Section in project org.hl7.fhir.core by hapifhir.

the class BundleValidator method validateSections.

private void validateSections(List<ValidationMessage> errors, List<Element> entries, Element focus, NodeStack stack, String fullUrl, String id) {
    List<Element> sections = new ArrayList<Element>();
    focus.getNamedChildren("section", sections);
    int i = 1;
    for (Element section : sections) {
        NodeStack localStack = stack.push(section, i, null, null);
        // technically R4+, but there won't be matches from before that
        validateDocumentReference(errors, entries, section, stack, fullUrl, id, true, "author", "Section");
        validateDocumentReference(errors, entries, section, stack, fullUrl, id, false, "focus", "Section");
        List<Element> sectionEntries = new ArrayList<Element>();
        section.getNamedChildren(ENTRY, sectionEntries);
        int j = 1;
        for (Element sectionEntry : sectionEntries) {
            NodeStack localStack2 = localStack.push(sectionEntry, j, null, null);
            validateBundleReference(errors, entries, sectionEntry, "Section Entry", localStack2, fullUrl, "Composition", id);
            j++;
        }
        validateSections(errors, entries, section, localStack, fullUrl, id);
        i++;
    }
}