Examples with Attachment org.obiba.mica.file.Attachment used on opensource projects

Example 6 with Attachment

use of org.obiba.mica.file.Attachment in project mica2 by obiba.

the class StudyPackageImportServiceImpl method importNetwork.

private void importNetwork(Network network, boolean publish, StudyPackage studyPackage) throws IOException {
    Network updated;
    try {
        Network existing = networkService.findById(network.getId());
        network.getStudyIds().stream().filter(sid -> !existing.getStudyIds().contains(sid)).forEach(sid -> existing.getStudyIds().add(sid));
        updated = existing;
    } catch (NoSuchNetworkException e) {
        updated = network;
    }
    for (Map.Entry<String, ByteSource> e : studyPackage.attachments.entrySet()) {
        Attachment attachment = network.getLogo();
        if (attachment != null && attachment.getId().equals(e.getKey())) {
            saveTempFile(attachment, e.getValue());
            updated.setLogo(attachment);
        }
    }
    networkService.save(updated);
    if (publish)
        networkService.publish(updated.getId(), true, PublishCascadingScope.ALL);
}

Example 7 with Attachment

use of org.obiba.mica.file.Attachment in project mica2 by obiba.

the class StudyDtosTest method createAttachment.

private Attachment createAttachment() {
    Attachment attachment = new Attachment();
    attachment.setId("123");
    attachment.setName("logo123");
    return attachment;
}

Example 8 with Attachment

use of org.obiba.mica.file.Attachment in project mica2 by obiba.

the class AbstractFileSystemResource method doGetAttachment.

protected Attachment doGetAttachment(String path, @Nullable String version, @Nullable String shareKey) {
    String basePath = normalizePath(path);
    if (isPublishedFileSystem())
        subjectAclService.checkAccess("/file", basePath);
    else
        subjectAclService.checkPermission("/draft/file", "VIEW", basePath, shareKey);
    if (path.endsWith("/"))
        throw new IllegalArgumentException("Folder download is not supported");
    Pair<String, String> pathName = FileSystemService.extractPathName(basePath);
    AttachmentState state = fileSystemService.getAttachmentState(pathName.getKey(), pathName.getValue(), isPublishedFileSystem());
    if (isPublishedFileSystem())
        return state.getPublishedAttachment();
    if (Strings.isNullOrEmpty(version))
        return state.getAttachment();
    List<Attachment> attachments = fileSystemService.getAttachmentRevisions(state).stream().filter(a -> a.getId().equals(version)).collect(Collectors.toList());
    if (attachments.isEmpty())
        throw new NoSuchElementException("No file version " + version + " found at path: " + basePath);
    return attachments.get(0);
}

Example 9 with Attachment

use of org.obiba.mica.file.Attachment in project mica2 by obiba.

the class DraftFileSystemResource method doReinstate.

private void doReinstate(String path, String versionId) {
    Attachment attachment = doGetAttachment(path, versionId);
    fileSystemService.reinstate(attachment);
}

Example 10 with Attachment

use of org.obiba.mica.file.Attachment in project mica2 by obiba.

the class DraftHarmonizationStudyResource method file.

@Path("/file/{fileId}")
public FileResource file(@PathParam("fileId") String fileId, @QueryParam("key") String key) {
    checkPermission("/draft/harmonization-study", "VIEW", key);
    FileResource fileResource = applicationContext.getBean(FileResource.class);
    HarmonizationStudy study = studyService.findDraft(id);
    if (study.hasLogo() && study.getLogo().getId().equals(fileId)) {
        fileResource.setAttachment(study.getLogo());
    } else {
        List<Attachment> attachments = fileSystemService.findAttachments(String.format("^/harmonization-study/%s", study.getId()), false).stream().filter(a -> a.getId().equals(fileId)).collect(Collectors.toList());
        if (attachments.isEmpty())
            throw NoSuchEntityException.withId(Attachment.class, fileId);
        fileResource.setAttachment(attachments.get(0));
    }
    return fileResource;
}