Examples with OrcidIdentifier org.orcid.jaxb.model.message.OrcidIdentifier used on opensource projects

Example 16 with OrcidIdentifier

use of org.orcid.jaxb.model.message.OrcidIdentifier in project ORCID-Source by ORCID.

the class VisibilityFilterImpl method getMessageIdForLog.

private String getMessageIdForLog(OrcidMessage messageToBeFiltered) {
    String messageIdForLog = "unknown";
    OrcidSearchResults orcidSearchResults = messageToBeFiltered.getOrcidSearchResults();
    OrcidProfile orcidProfile = messageToBeFiltered.getOrcidProfile();
    if (orcidSearchResults != null) {
        messageIdForLog = "orcid-search-results";
    } else if (orcidProfile != null) {
        OrcidIdentifier orcidIdentifier = orcidProfile.getOrcidIdentifier();
        if (orcidIdentifier != null) {
            messageIdForLog = orcidIdentifier.getPath();
        }
        Orcid orcid = orcidProfile.getOrcid();
        if (orcid != null) {
            messageIdForLog = orcid.getValue();
        }
    }
    return messageIdForLog;
}

Example 17 with OrcidIdentifier

use of org.orcid.jaxb.model.message.OrcidIdentifier in project ORCID-Source by ORCID.

the class SetUpClientsAndUsers method createUser.

private void createUser(Map<String, String> params) throws Exception {
    // Create it
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier(params.get(ORCID)));
    orcidProfile.setType(OrcidType.fromValue(params.get(ORCID_TYPE)));
    if (params.get(MEMBER_TYPE) != null) {
        orcidProfile.setGroupType(MemberType.fromValue(params.get(MEMBER_TYPE)));
    }
    orcidProfile.setPassword(params.get(PASSWORD));
    OrcidInternal internal = new OrcidInternal();
    Preferences preferences = new Preferences();
    ActivitiesVisibilityDefault visibilityDefaults = new ActivitiesVisibilityDefault();
    visibilityDefaults.setValue(Visibility.PUBLIC);
    preferences.setActivitiesVisibilityDefault(visibilityDefaults);
    internal.setPreferences(preferences);
    orcidProfile.setOrcidInternal(internal);
    Email email = new Email(params.get(EMAIL));
    email.setCurrent(true);
    email.setPrimary(true);
    email.setVerified(true);
    email.setVisibility(Visibility.PUBLIC);
    List<Email> emails = new ArrayList<Email>();
    emails.add(email);
    ContactDetails contactDetails = new ContactDetails();
    contactDetails.setEmail(emails);
    org.orcid.jaxb.model.message.PersonalDetails personalDetails = new org.orcid.jaxb.model.message.PersonalDetails();
    org.orcid.jaxb.model.message.CreditName creditName = new org.orcid.jaxb.model.message.CreditName(params.get(CREDIT_NAME));
    creditName.setVisibility(OrcidVisibilityDefaults.NAMES_DEFAULT.getVisibility());
    personalDetails.setCreditName(creditName);
    personalDetails.setFamilyName(new org.orcid.jaxb.model.message.FamilyName(params.get(FAMILY_NAMES)));
    personalDetails.setGivenNames(new org.orcid.jaxb.model.message.GivenNames(params.get(GIVEN_NAMES)));
    OrcidBio bio = new OrcidBio();
    bio.setContactDetails(contactDetails);
    bio.setPersonalDetails(personalDetails);
    bio.setBiography(new Biography(params.get(BIO), OrcidVisibilityDefaults.BIOGRAPHY_DEFAULT.getVisibility()));
    orcidProfile.setOrcidBio(bio);
    OrcidHistory history = new OrcidHistory();
    history.setClaimed(new Claimed(true));
    history.setSubmissionDate(new SubmissionDate(DateUtils.convertToXMLGregorianCalendar(new Date())));
    history.setCreationMethod(CreationMethod.DIRECT);
    orcidProfile.setOrcidHistory(history);
    orcidProfileManager.createOrcidProfile(orcidProfile, false, false);
    if (params.containsKey(LOCKED)) {
        orcidProfileManager.lockProfile(params.get(ORCID), LockReason.SPAM.getLabel(), null);
    }
    if (params.containsKey(DEVELOPER_TOOLS)) {
        profileEntityManager.enableDeveloperTools(orcidProfile);
    }
}

Example 18 with OrcidIdentifier

use of org.orcid.jaxb.model.message.OrcidIdentifier in project ORCID-Source by ORCID.

the class RDFWriterTest method fakeBio.

private OrcidMessage fakeBio() throws DatatypeConfigurationException {
    OrcidMessage orcidMessage = new OrcidMessage();
    OrcidProfile orcidProfile1 = new OrcidProfile();
    OrcidIdentifier orcidIdentifier = new OrcidIdentifier();
    orcidProfile1.setOrcidIdentifier(orcidIdentifier);
    orcidIdentifier.setUri("http://orcid.example.com/000-1337");
    orcidIdentifier.setPath("000-1337");
    OrcidBio bio = new OrcidBio();
    orcidProfile1.setOrcidBio(bio);
    OrcidHistory history = new OrcidHistory();
    XMLGregorianCalendar value = dataTypeFactory.newXMLGregorianCalendar(1980, 12, 31, 23, 29, 29, 999, 0);
    history.setCreationMethod(CreationMethod.WEBSITE);
    history.setLastModifiedDate(new LastModifiedDate(value));
    orcidProfile1.setOrcidHistory(history);
    PersonalDetails personal = new PersonalDetails();
    bio.setPersonalDetails(personal);
    personal.setFamilyName(new FamilyName("Doe"));
    personal.setCreditName(new CreditName("John F Doe"));
    personal.setGivenNames(new GivenNames("John"));
    personal.setOtherNames(new OtherNames());
    personal.getOtherNames().addOtherName("Johnny", Visibility.PUBLIC);
    personal.getOtherNames().addOtherName("Mr Doe", Visibility.PUBLIC);
    ResearcherUrls urls = new ResearcherUrls();
    bio.setResearcherUrls(urls);
    ResearcherUrl anonymous = new ResearcherUrl(new Url("http://example.com/anon"), Visibility.PUBLIC);
    urls.getResearcherUrl().add(anonymous);
    // "home page" - with strange casing
    ResearcherUrl homePage = new ResearcherUrl(new Url("http://example.com/myPage"), new UrlName("homePage"), Visibility.PUBLIC);
    urls.getResearcherUrl().add(homePage);
    ResearcherUrl foaf = new ResearcherUrl(new Url("http://example.com/foaf#me"), new UrlName("FOAF"), Visibility.PUBLIC);
    urls.getResearcherUrl().add(foaf);
    ResearcherUrl webId = new ResearcherUrl(new Url("http://example.com/webId"), new UrlName("webID"), Visibility.PUBLIC);
    urls.getResearcherUrl().add(webId);
    ResearcherUrl other = new ResearcherUrl(new Url("http://example.com/other"), new UrlName("other"), Visibility.PUBLIC);
    urls.getResearcherUrl().add(other);
    bio.setContactDetails(new ContactDetails());
    bio.getContactDetails().setEmail(Arrays.asList(new Email("john@example.org"), new Email("doe@example.com")));
    bio.getContactDetails().setAddress(new Address());
    bio.getContactDetails().getAddress().setCountry(new Country(Iso3166Country.GB));
    orcidMessage.setOrcidProfile(orcidProfile1);
    return orcidMessage;
}

Example 19 with OrcidIdentifier

use of org.orcid.jaxb.model.message.OrcidIdentifier in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testDefaultPrivacyOnBio.

@Test
public void testDefaultPrivacyOnBio() {
    SecurityContextTestUtils.setUpSecurityContext("4444-4444-4444-4499", ScopePathType.ORCID_BIO_UPDATE);
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier("4444-4444-4444-4499"));
    orcidMessage.setOrcidProfile(orcidProfile);
    OrcidBio orcidBio = new OrcidBio();
    orcidProfile.setOrcidBio(orcidBio);
    PersonalDetails personalDetails = new PersonalDetails();
    orcidBio.setPersonalDetails(personalDetails);
    GivenNames givenNames = new GivenNames("Test given names");
    personalDetails.setGivenNames(givenNames);
    CreditName creditName = new CreditName("Credit Name");
    personalDetails.setCreditName(creditName);
    ExternalIdentifier id = new ExternalIdentifier();
    id.setExternalIdCommonName(new ExternalIdCommonName("cn1"));
    id.setExternalIdReference(new ExternalIdReference("value1"));
    orcidBio.setExternalIdentifiers(new ExternalIdentifiers());
    orcidBio.getExternalIdentifiers().getExternalIdentifier().add(id);
    personalDetails.setOtherNames(new OtherNames());
    personalDetails.getOtherNames().addOtherName("on1", null);
    orcidBio.setKeywords(new Keywords());
    orcidBio.getKeywords().getKeyword().add(new Keyword("kw1", null));
    orcidBio.setResearcherUrls(new ResearcherUrls());
    orcidBio.getResearcherUrls().getResearcherUrl().add(new ResearcherUrl(new Url("http://rurl2.com"), null));
    t2OrcidApiServiceDelegator.updateBioDetails(mockedUriInfo, "4444-4444-4444-4499", orcidMessage);
    OrcidProfile p = orcidProfileManager.retrieveOrcidProfile("4444-4444-4444-4499");
    assertEquals("cn1", p.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(0).getExternalIdCommonName().getContent());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getExternalIdentifiers().getVisibility());
    assertEquals("on1", p.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().get(0).getContent());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getPersonalDetails().getOtherNames().getVisibility());
    assertEquals("kw1", p.getOrcidBio().getKeywords().getKeyword().get(0).getContent());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getKeywords().getVisibility());
    assertEquals(new Url("http://rurl2.com"), p.getOrcidBio().getResearcherUrls().getResearcherUrl().get(0).getUrl());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getResearcherUrls().getVisibility());
//now test what happens if we add a new one.
}

Example 20 with OrcidIdentifier

use of org.orcid.jaxb.model.message.OrcidIdentifier in project ORCID-Source by ORCID.

the class T2OrcidApiServiceVersionedDelegatorTest method addAffiliationTest.

@Test
public void addAffiliationTest() {
    setUpSecurityContext();
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidMessage.setOrcidProfile(orcidProfile);
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier("4444-4444-4444-4441"));
    OrcidActivities orcidActivities = new OrcidActivities();
    orcidProfile.setOrcidActivities(orcidActivities);
    Affiliations affiliations = new Affiliations();
    Affiliation affiliation = new Affiliation();
    affiliation.setStartDate(new FuzzyDate(2010, 01, 01));
    affiliation.setEndDate(new FuzzyDate(2015, 01, 01));
    affiliation.setDepartmentName("Dep Name");
    affiliation.setRoleTitle("Role Title");
    affiliation.setType(AffiliationType.EDUCATION);
    Organization organization = new Organization();
    organization.setName("My Org");
    OrganizationAddress add = new OrganizationAddress();
    add.setCity("My City");
    add.setCountry(Iso3166Country.US);
    organization.setAddress(add);
    affiliation.setOrganization(organization);
    affiliations.getAffiliation().add(affiliation);
    orcidActivities.setAffiliations(affiliations);
    Response response = t2OrcidApiServiceDelegatorLatest.addAffiliations(mockedUriInfo, "4444-4444-4444-4441", orcidMessage);
    assertNotNull(response);
    assertEquals(Response.Status.CREATED.getStatusCode(), response.getStatus());
    assertEquals(1, orgAffiliationRelationDao.getByUserAndType("4444-4444-4444-4441", org.orcid.jaxb.model.record_v2.AffiliationType.EDUCATION).size());
}