Examples with FieldSet org.pmiops.workbench.model.FieldSet used on opensource projects

Example 11 with FieldSet

use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.

the class CohortMaterializationServiceTest method testMaterializeCohortPersonFieldSetPersonIdWithStringsFilter.

@Test
public void testMaterializeCohortPersonFieldSetPersonIdWithStringsFilter() {
    TableQuery tableQuery = new TableQuery();
    tableQuery.setTableName("person");
    tableQuery.setColumns(ImmutableList.of("person_id"));
    ColumnFilter filter = new ColumnFilter();
    filter.setColumnName("person_source_value");
    filter.setOperator(Operator.IN);
    filter.setValues(ImmutableList.of("foobar", "psv"));
    tableQuery.addFiltersItem(ImmutableList.of(filter));
    FieldSet fieldSet = new FieldSet();
    fieldSet.setTableQuery(tableQuery);
    MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.allGenders(), makeRequest(fieldSet, 1000));
    assertPersonIds(response, 1L, 2L, 102246L);
    assertThat(response.getNextPageToken()).isNull();
}

Example 12 with FieldSet

use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.

the class CohortMaterializationServiceTest method testMaterializeCohortPersonFieldSetPersonIdWithStringLikeFilter.

@Test
public void testMaterializeCohortPersonFieldSetPersonIdWithStringLikeFilter() {
    TableQuery tableQuery = new TableQuery();
    tableQuery.setTableName("person");
    tableQuery.setColumns(ImmutableList.of("person_id"));
    ColumnFilter filter = new ColumnFilter();
    filter.setColumnName("person_source_value");
    filter.setOperator(Operator.LIKE);
    filter.setValue("p%");
    tableQuery.addFiltersItem(ImmutableList.of(filter));
    FieldSet fieldSet = new FieldSet();
    fieldSet.setTableQuery(tableQuery);
    MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.allGenders(), makeRequest(fieldSet, 1000));
    assertPersonIds(response, 1L, 2L, 102246L);
    assertThat(response.getNextPageToken()).isNull();
}

Example 13 with FieldSet

use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.

the class CohortMaterializationServiceTest method testMaterializeCohortObservationFilterObservationDateEqual.

@Test
public void testMaterializeCohortObservationFilterObservationDateEqual() {
    TableQuery tableQuery = new TableQuery();
    tableQuery.setTableName("observation");
    tableQuery.setColumns(ImmutableList.of("observation_id"));
    ColumnFilter columnFilter = new ColumnFilter();
    columnFilter.setColumnName("observation_date");
    columnFilter.setValueDate("2009-12-03");
    tableQuery.addFiltersItem(ImmutableList.of(columnFilter));
    FieldSet fieldSet = new FieldSet();
    fieldSet.setTableQuery(tableQuery);
    MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.males(), makeRequest(fieldSet, 1000));
    assertResults(response, ImmutableMap.of("observation_id", 5L));
    assertThat(response.getNextPageToken()).isNull();
}

Example 14 with FieldSet

use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.

the class CohortMaterializationServiceTest method testMaterializeCohortObservationFilterObservationDateGreaterThan.

@Test
public void testMaterializeCohortObservationFilterObservationDateGreaterThan() {
    TableQuery tableQuery = new TableQuery();
    tableQuery.setTableName("observation");
    tableQuery.setColumns(ImmutableList.of("observation_id"));
    ColumnFilter columnFilter = new ColumnFilter();
    columnFilter.setColumnName("observation_date");
    columnFilter.setOperator(Operator.GREATER_THAN);
    columnFilter.setValueDate("2009-12-02");
    tableQuery.addFiltersItem(ImmutableList.of(columnFilter));
    FieldSet fieldSet = new FieldSet();
    fieldSet.setTableQuery(tableQuery);
    MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.males(), makeRequest(fieldSet, 1000));
    assertResults(response, ImmutableMap.of("observation_id", 5L));
    assertThat(response.getNextPageToken()).isNull();
}

Example 15 with FieldSet

use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.

the class CohortMaterializationServiceTest method testMaterializeCohortPersonFieldSetPersonIdWithStringFilter.

@Test
public void testMaterializeCohortPersonFieldSetPersonIdWithStringFilter() {
    TableQuery tableQuery = new TableQuery();
    tableQuery.setTableName("person");
    tableQuery.setColumns(ImmutableList.of("person_id"));
    ColumnFilter filter = new ColumnFilter();
    filter.setColumnName("person_source_value");
    filter.setValue("psv");
    tableQuery.addFiltersItem(ImmutableList.of(filter));
    FieldSet fieldSet = new FieldSet();
    fieldSet.setTableQuery(tableQuery);
    MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.allGenders(), makeRequest(fieldSet, 1000));
    assertPersonIds(response, 1L, 2L, 102246L);
    assertThat(response.getNextPageToken()).isNull();
}