use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.
the class CohortMaterializationServiceTest method testMaterializeCohortObservationFilterObservationDatetimeGreaterThan.
@Test
public void testMaterializeCohortObservationFilterObservationDatetimeGreaterThan() {
TableQuery tableQuery = new TableQuery();
tableQuery.setTableName("observation");
tableQuery.setColumns(ImmutableList.of("observation_id"));
ColumnFilter columnFilter = new ColumnFilter();
columnFilter.setColumnName("observation_datetime");
columnFilter.setOperator(Operator.GREATER_THAN);
columnFilter.setValueDate("2009-12-03 04:59:59 UTC");
tableQuery.addFiltersItem(ImmutableList.of(columnFilter));
FieldSet fieldSet = new FieldSet();
fieldSet.setTableQuery(tableQuery);
MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.males(), makeRequest(fieldSet, 1000));
assertResults(response, ImmutableMap.of("observation_id", 5L));
assertThat(response.getNextPageToken()).isNull();
}
use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.
the class CohortMaterializationServiceTest method testMaterializeCohortPersonFieldSetPersonIdOnly.
@Test
public void testMaterializeCohortPersonFieldSetPersonIdOnly() {
TableQuery tableQuery = new TableQuery();
tableQuery.setTableName("person");
tableQuery.setColumns(ImmutableList.of("person_id"));
FieldSet fieldSet = new FieldSet();
fieldSet.setTableQuery(tableQuery);
MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.males(), makeRequest(fieldSet, 1000));
assertPersonIds(response, 1L);
assertThat(response.getNextPageToken()).isNull();
}
use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.
the class CohortMaterializationServiceTest method testMaterializeCohortObservationFilterObservationDateMismatch.
@Test
public void testMaterializeCohortObservationFilterObservationDateMismatch() {
TableQuery tableQuery = new TableQuery();
tableQuery.setTableName("observation");
tableQuery.setColumns(ImmutableList.of("observation_id"));
ColumnFilter columnFilter = new ColumnFilter();
columnFilter.setColumnName("observation_date");
columnFilter.setValueDate("2009-12-04");
tableQuery.addFiltersItem(ImmutableList.of(columnFilter));
FieldSet fieldSet = new FieldSet();
fieldSet.setTableQuery(tableQuery);
MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.males(), makeRequest(fieldSet, 1000));
assertResults(response);
assertThat(response.getNextPageToken()).isNull();
}
use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.
the class CohortMaterializationServiceTest method testMaterializeCohortObservationFilterObservationDatetimeMismatch.
@Test
public void testMaterializeCohortObservationFilterObservationDatetimeMismatch() {
TableQuery tableQuery = new TableQuery();
tableQuery.setTableName("observation");
tableQuery.setColumns(ImmutableList.of("observation_id"));
ColumnFilter columnFilter = new ColumnFilter();
columnFilter.setColumnName("observation_datetime");
columnFilter.setValueDate("2009-12-03 05:00:01 UTC");
tableQuery.addFiltersItem(ImmutableList.of(columnFilter));
FieldSet fieldSet = new FieldSet();
fieldSet.setTableQuery(tableQuery);
MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.males(), makeRequest(fieldSet, 1000));
assertResults(response);
assertThat(response.getNextPageToken()).isNull();
}
use of org.pmiops.workbench.model.FieldSet in project workbench by all-of-us.
the class CohortMaterializationServiceTest method testMaterializeCohortPersonFieldSetPersonIdWithStringGreaterThanNullNonMatch.
@Test
public void testMaterializeCohortPersonFieldSetPersonIdWithStringGreaterThanNullNonMatch() {
TableQuery tableQuery = new TableQuery();
tableQuery.setTableName("person");
tableQuery.setColumns(ImmutableList.of("person_id"));
ColumnFilter filter = new ColumnFilter();
filter.setColumnName("ethnicity_source_value");
filter.setOperator(Operator.GREATER_THAN);
filter.setValue("esf");
tableQuery.addFiltersItem(ImmutableList.of(filter));
FieldSet fieldSet = new FieldSet();
fieldSet.setTableQuery(tableQuery);
MaterializeCohortResponse response = cohortMaterializationService.materializeCohort(null, SearchRequests.allGenders(), makeRequest(fieldSet, 1000));
assertPersonIds(response, 1L, 2L);
assertThat(response.getNextPageToken()).isNull();
}
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