Examples with RemoteProxyException cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException used on opensource projects

Example 36 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method reloadBioModelInfos.

/**
 * Insert the method's description here.
 * Creation date: (11/14/00 5:33:21 PM)
 * @return cbit.vcell.biomodel.BioModelInfo[]
 */
private void reloadBioModelInfos() throws DataAccessException {
    try {
        System.out.println("ClientDocumentManager.reloadBioModelInfos()");
        BioModelInfo[] bioModelInfos = sessionManager.getUserMetaDbServer().getBioModelInfos(true);
        if (bioModelInfos != null) {
            bioModelInfoHash.clear();
            for (int i = 0; i < bioModelInfos.length; i++) {
                bioModelInfoHash.put(bioModelInfos[i].getVersion().getVersionKey(), bioModelInfos[i]);
            }
        }
    } catch (RemoteProxyException e) {
        handleRemoteProxyException(e);
        throw new DataAccessException("RemoteProxyException: " + e.getMessage());
    }
}

Example 37 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method saveAsNew.

/**
 * Insert the method's description here.
 * Creation date: (1/19/01 11:27:52 AM)
 */
public Geometry saveAsNew(Geometry geometry, java.lang.String newName) throws DataAccessException {
    try {
        String geometryXML = null;
        try {
            geometryXML = XmlHelper.geometryToXML(geometry);
        } catch (XmlParseException e) {
            e.printStackTrace(System.out);
            throw new DataAccessException(e.getMessage());
        }
        if (isChanged(geometry, geometryXML) == false) {
            System.out.println("<<<<<WARNING>>>>>>>ClientDocumentManger.save(Geometry), called on unchanged geometry");
            return geometry;
        }
        String savedGeometryXML = sessionManager.getUserMetaDbServer().saveGeometryAs(new BigString(geometryXML), newName).toString();
        Geometry savedGeometry = getGeometryFromDatabaseXML(savedGeometryXML);
        KeyValue savedKey = savedGeometry.getVersion().getVersionKey();
        if (xmlHash.get(savedKey) == null) {
            xmlHash.put(savedKey, savedGeometryXML);
        }
        updateGeometryRelatedHashes(savedGeometry);
        return savedGeometry;
    } catch (RemoteProxyException e) {
        e.printStackTrace(System.out);
        throw new DataAccessException(VCellErrorMessages.FAIL_SAVE_MESSAGE + "\n\n" + e.getMessage());
    }
}

Example 38 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method preloadSimulationStatus.

/**
 * Insert the method's description here.
 * Creation date: (9/1/2004 12:33:16 PM)
 * @param simKeys cbit.sql.KeyValue[]
 */
private void preloadSimulationStatus(KeyValue[] simKeys) {
    boolean bNeedRefreshStatus = false;
    for (int i = 0; i < simKeys.length; i++) {
        if (!simulationStatusHash.containsKey(simKeys[i])) {
            bNeedRefreshStatus = true;
        }
    }
    if (bNeedRefreshStatus) {
        try {
            SimulationStatus[] simulationStatusArray = null;
            try {
                simulationStatusArray = sessionManager.getSimulationController().getSimulationStatus(simKeys);
            } catch (RemoteProxyException e) {
                handleRemoteProxyException(e);
                try {
                    simulationStatusArray = sessionManager.getSimulationController().getSimulationStatus(simKeys);
                } catch (RemoteProxyException e2) {
                    handleRemoteProxyException(e2);
                }
            }
            for (int i = 0; i < simKeys.length; i++) {
                SimulationStatus simulationStatus = null;
                for (int j = 0; simulationStatusArray != null && j < simulationStatusArray.length; j++) {
                    // these are server-supplied statuses, jobStatus array is not null
                    if (simulationStatusArray[j] != null && simulationStatusArray[j].getVCSimulationIdentifier().getSimulationKey().equals(simKeys[i])) {
                        simulationStatus = simulationStatusArray[j];
                    }
                }
                simulationStatusHash.put(simKeys[i], simulationStatus);
            }
        } catch (DataAccessException e) {
            e.printStackTrace(System.out);
        }
    }
}

Example 39 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class RemoteProxyVCellConnectionFactoryTest method test.

@Test
public void test() throws IOException {
    BiomodelRepresentation[] biomodelReps = apiClient.getBioModels(new BioModelsQuerySpec());
    assertNotNull(biomodelReps);
    VCInfoContainer vcInfoContainer = null;
    try {
        vcInfoContainer = vcConn.getUserMetaDbServer().getVCInfoContainer();
    } catch (DataAccessException | RemoteProxyException e) {
        e.printStackTrace();
        fail("exception");
    }
    assertNotNull(vcInfoContainer);
}