Examples with RemoteProxyException cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException used on opensource projects

Example 16 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method setGroupPublic.

/**
 * Insert the method's description here.
 * Creation date: (11/28/00 5:43:44 PM)
 * @param bioModelInfo cbit.vcell.biomodel.BioModelInfo
 */
public VCImageInfo setGroupPublic(VCImageInfo imageInfo) throws DataAccessException {
    try {
        // 
        // publish from database
        // 
        VCImageInfo newImageInfo = (VCImageInfo) setGroupPublic0(imageInfo, VersionableType.VCImage, imgInfoHash);
        // 
        // delete Image from cache
        // 
        xmlHash.remove(imageInfo.getVersion().getVersionKey());
        fireDatabaseUpdate(new DatabaseEvent(this, DatabaseEvent.UPDATE, imageInfo, newImageInfo));
        return newImageInfo;
    } catch (RemoteProxyException e) {
        handleRemoteProxyException(e);
        throw new DataAccessException(e.getMessage());
    }
}

Example 17 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method save.

/**
 * Insert the method's description here.
 * Creation date: (10/28/00 12:08:30 AM)
 */
public Geometry save(Geometry geometry) throws DataAccessException {
    try {
        String geometryXML = null;
        try {
            geometryXML = XmlHelper.geometryToXML(geometry);
        } catch (XmlParseException e) {
            e.printStackTrace(System.out);
            throw new DataAccessException(e.getMessage());
        }
        String savedGeometryXML = sessionManager.getUserMetaDbServer().saveGeometry(new BigString(geometryXML)).toString();
        Geometry savedGeometry = getGeometryFromDatabaseXML(savedGeometryXML);
        KeyValue savedKey = savedGeometry.getVersion().getVersionKey();
        if (xmlHash.get(savedKey) == null) {
            xmlHash.put(savedKey, savedGeometryXML);
        }
        updateGeometryRelatedHashes(savedGeometry);
        return savedGeometry;
    } catch (RemoteProxyException e) {
        e.printStackTrace(System.out);
        throw new DataAccessException(VCellErrorMessages.FAIL_SAVE_MESSAGE + "\n\n" + e.getMessage());
    }
}

Example 18 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method reloadMathModelInfos.

/**
 * Insert the method's description here.
 * Creation date: (11/14/00 5:33:21 PM)
 * @return cbit.vcell.biomodel.BioModelInfo[]
 */
private void reloadMathModelInfos() throws DataAccessException {
    try {
        System.out.println("ClientDocumentManager.reloadMathModelInfos()");
        MathModelInfo[] mathModelInfos = sessionManager.getUserMetaDbServer().getMathModelInfos(true);
        if (mathModelInfos != null) {
            mathModelInfoHash.clear();
            for (int i = 0; i < mathModelInfos.length; i++) {
                mathModelInfoHash.put(mathModelInfos[i].getVersion().getVersionKey(), mathModelInfos[i]);
            }
        }
    } catch (RemoteProxyException e) {
        handleRemoteProxyException(e);
        throw new DataAccessException("RemoteProxyException: " + e.getMessage());
    }
}

Example 19 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method delete.

/**
 * Insert the method's description here.
 * Creation date: (11/28/00 5:43:44 PM)
 * @param bioModelInfo cbit.vcell.biomodel.BioModelInfo
 */
public void delete(BioModelInfo bioModelInfo) throws DataAccessException {
    try {
        // BioModelMetaData bioModelMetaData = getBioModelMetaData(bioModelInfo);
        // 
        // delete from database
        // 
        sessionManager.getUserMetaDbServer().deleteBioModel(bioModelInfo.getVersion().getVersionKey());
        // 
        // delete BioModel from cache and BioModelInfo from bioModelInfo list
        // 
        xmlHash.remove(bioModelInfo.getVersion().getVersionKey());
        bioModelInfoHash.remove(bioModelInfo.getVersion().getVersionKey());
        fireDatabaseDelete(new DatabaseEvent(this, DatabaseEvent.DELETE, bioModelInfo, null));
    // //
    // // go through list of Simulations in the BioModelMetaData and remove unreferenced Simulations
    // //
    // Enumeration enumSim = bioModelMetaData.getSimulationInfos();
    // while (enumSim.hasMoreElements()){
    // SimulationInfo simInfo = (SimulationInfo)enumSim.nextElement();
    // if (isSimulationReferenced(simInfo)==false){
    // simInfoHash.remove(simInfo.getVersion().getVersionKey());
    // resultSetInfoHash.remove(simInfo.getVersion().getVersionKey());
    // fireDatabaseDelete(new DatabaseEvent(this, DatabaseEvent.DELETE, simInfo, null));
    // }
    // }
    } catch (RemoteProxyException e) {
        handleRemoteProxyException(e);
        throw new DataAccessException(e.getMessage());
    }
}

Example 20 with RemoteProxyException

use of cbit.vcell.message.server.bootstrap.client.RemoteProxyVCellConnectionFactory.RemoteProxyException in project vcell by virtualcell.

the class ClientDocumentManager method setGroupPublic.

/**
 * Insert the method's description here.
 * Creation date: (11/28/00 5:43:44 PM)
 * @param bioModelInfo cbit.vcell.biomodel.BioModelInfo
 */
public GeometryInfo setGroupPublic(GeometryInfo geometryInfo) throws DataAccessException {
    try {
        // 
        // publish from database
        // 
        GeometryInfo newGeometryInfo = (GeometryInfo) setGroupPublic0(geometryInfo, VersionableType.Geometry, geoInfoHash);
        // //
        // // delete Geometry from cache
        // //
        // xmlHash.remove(geometryInfo.getVersion().getVersionKey());
        // //
        // // delete any MathModelMetaData's that use this GeometryInfo from cache
        // //
        // MathModelInfo referencedMathModelInfos[] = getMathModelReferences(geometryInfo);
        // for (int i = 0; i < referencedMathModelInfos.length; i++){
        // xmlHash.remove(referencedMathModelInfos[i].getVersion().getVersionKey());
        // }
        // //
        // // delete any BioModelMetaData's that use this GeometryInfo from cache
        // //
        // BioModelInfo referencedBioModelInfos[] = getBioModelReferences(geometryInfo);
        // for (int i = 0; i < referencedBioModelInfos.length; i++){
        // xmlHash.remove(referencedBioModelInfos[i].getVersion().getVersionKey());
        // }
        fireDatabaseUpdate(new DatabaseEvent(this, DatabaseEvent.UPDATE, geometryInfo, newGeometryInfo));
        return newGeometryInfo;
    } catch (RemoteProxyException e) {
        handleRemoteProxyException(e);
        throw new DataAccessException(e.getMessage());
    }
}