Examples with SimpleJobStatus cbit.vcell.server.SimpleJobStatus used on opensource projects

Example 1 with SimpleJobStatus

use of cbit.vcell.server.SimpleJobStatus in project vcell by virtualcell.

the class ServerManageConsole method query.

/**
 * Insert the method's description here.
 * Creation date: (9/3/2003 8:00:07 AM)
 */
private void query() {
    boolean bOtherConditions = false;
    getRemoveFromListButton().setEnabled(false);
    getSubmitSelectedButton().setEnabled(false);
    getStopSelectedButton().setEnabled(false);
    SimpleJobStatusQuerySpec querySpec = new SimpleJobStatusQuerySpec();
    querySpec.maxRows = 1000;
    String text = getQuerySimField().getText();
    if (text != null && text.trim().length() > 0) {
        try {
            bOtherConditions = true;
            long simID = Long.parseLong(text);
            querySpec.simId = simID;
        } catch (NumberFormatException ex) {
        }
    }
    text = getQueryHostField().getText();
    if (text != null && text.trim().length() > 0) {
        bOtherConditions = true;
        querySpec.computeHost = text.toLowerCase();
    }
    text = getQueryServerIDField().getText();
    if (text != null && text.trim().length() > 0) {
        bOtherConditions = true;
        querySpec.serverId = text.toLowerCase();
    }
    text = getQueryUserField().getText();
    if (text != null && text.trim().length() > 0) {
        bOtherConditions = true;
        querySpec.userid = text;
    }
    boolean bAllStatus = getQueryAllStatusCheck().isSelected();
    querySpec.waiting = bAllStatus || getQueryWaitingCheck().isSelected();
    querySpec.queued = bAllStatus || getQueryQueuedCheck().isSelected();
    querySpec.dispatched = bAllStatus || getQueryDispatchedCheck().isSelected();
    querySpec.running = bAllStatus || getQueryRunningCheck().isSelected();
    querySpec.completed = bAllStatus || getQueryCompletedCheck().isSelected();
    querySpec.stopped = bAllStatus || getQueryStoppedCheck().isSelected();
    querySpec.failed = bAllStatus || getQueryFailedCheck().isSelected();
    if (getQuerySubmitDateCheck().isSelected()) {
        bOtherConditions = true;
        // first second of day low time
        querySpec.submitLowMS = getQuerySubmitFromDate().getDate().getTime();
        // last second of dat high time
        querySpec.submitHighMS = getQuerySubmitToDate().getDate().getTime() + TimeUnit.DAYS.toMillis(1) - 1;
    }
    if (getQueryStartDateCheck().isSelected()) {
        bOtherConditions = true;
        // first second of day low time
        querySpec.startLowMS = getQueryStartFromDate().getDate().getTime();
        // last second of dat high time
        querySpec.startHighMS = getQueryStartToDate().getDate().getTime() + TimeUnit.DAYS.toMillis(1) - 1;
    }
    if (getQueryEndDateCheck().isSelected()) {
        bOtherConditions = true;
        // first second of day low time
        querySpec.endLowMS = getQueryEndFromDate().getDate().getTime();
        // last second of dat high time
        querySpec.endHighMS = getQueryEndToDate().getDate().getTime() + TimeUnit.DAYS.toMillis(1) - 1;
    }
    if (getQueryCompletedCheck().isSelected() && !bOtherConditions) {
        int n = javax.swing.JOptionPane.showConfirmDialog(this, "You are gonna get all the completed simulation jobs in the database, which is gonna be huge . Continue?", "Confirm", javax.swing.JOptionPane.YES_NO_OPTION);
        if (n == javax.swing.JOptionPane.NO_OPTION) {
            getNumResultsLabel().setText("0");
            getNumSelectedLabel().setText("0");
            ((JobTableModel) getQueryResultTable().getModel()).setData(null);
            return;
        }
    }
    try {
        SimulationDatabase simDatabase = new SimulationDatabaseDirect(adminDbTop, dbServerImpl, false);
        SimpleJobStatus[] resultList = simDatabase.getSimpleJobStatus(null, querySpec);
        getNumResultsLabel().setText("" + resultList.length);
        getNumSelectedLabel().setText("0");
        ((JobTableModel) getQueryResultTable().getModel()).setData(Arrays.asList(resultList));
    } catch (Exception ex) {
        getNumResultsLabel().setText("Query failed, please try again!");
        ((JobTableModel) getQueryResultTable().getModel()).setData(null);
    }
}

Example 2 with SimpleJobStatus

use of cbit.vcell.server.SimpleJobStatus in project vcell by virtualcell.

the class ServerManageConsole method submitSelectedButton_ActionPerformed.

private void submitSelectedButton_ActionPerformed(ActionEvent e) {
    int[] srows = getQueryResultTable().getSelectedRows();
    if (srows == null || srows.length == 0) {
        return;
    }
    final String SUBMIT_JOBS_OPTION = "submit jobs";
    final String CANCEL_OPTION = "cancel";
    String response = DialogUtils.showWarningDialog(this, "Are you sure you want to submit " + srows.length + " simulation job(s)? (see console for progress printed to stdout)", new String[] { SUBMIT_JOBS_OPTION, CANCEL_OPTION }, CANCEL_OPTION);
    if (response.equals(SUBMIT_JOBS_OPTION)) {
        for (int i = 0; i < srows.length; i++) {
            int selectedRow = srows[i];
            SimpleJobStatus simpleJobStatus = getReturnedSimulationJobStatus(selectedRow);
            String statusString = "[" + simpleJobStatus.simulationMetadata.vcSimID + ", " + simpleJobStatus.jobStatus.getSchedulerStatus().getDescription() + "]";
            if (simpleJobStatus.jobStatus.getSchedulerStatus().isDone()) {
                System.out.println("Submitting job (" + (i + 1) + " of " + srows.length + ") : " + statusString);
                resubmitSimulation(simpleJobStatus.simulationMetadata.vcSimID.getOwner().getName(), simpleJobStatus.simulationMetadata.vcSimID.getSimulationKey());
            } else {
                System.out.println("Submitting job (" + (i + 1) + " of " + srows.length + ") : " + statusString + ", is still running, skipping...");
            }
        }
    }
}

Example 3 with SimpleJobStatus

use of cbit.vcell.server.SimpleJobStatus in project vcell by virtualcell.

the class ViewJobsPanel method initialize.

private void initialize() {
    try {
        setName("ViewSimulationJobsPanel");
        // initialize the time button group and its components
        getTimeGroup();
        // ----------------------------------------------------------------------------------
        // filters, buttons
        JPanel top = new JPanel();
        // table with results
        JPanel bottom = new JPanel();
        Border loweredEtchedBorder = BorderFactory.createEtchedBorder(EtchedBorder.LOWERED);
        Border loweredBevelBorder = BorderFactory.createLoweredBevelBorder();
        TitledBorder titleTop = BorderFactory.createTitledBorder(loweredEtchedBorder, " User Options ");
        titleTop.setTitleJustification(TitledBorder.LEFT);
        titleTop.setTitlePosition(TitledBorder.TOP);
        TitledBorder titleBottom = BorderFactory.createTitledBorder(loweredEtchedBorder, " Query Results ");
        titleBottom.setTitleJustification(TitledBorder.LEFT);
        titleBottom.setTitlePosition(TitledBorder.TOP);
        top.setBorder(titleTop);
        bottom.setBorder(titleBottom);
        setLayout(new GridBagLayout());
        GridBagConstraints gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = 0;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        // top, left, bottom, right
        gbc.insets = new Insets(2, 2, 2, 3);
        add(top, gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = 1;
        gbc.weightx = 1.0;
        gbc.weighty = 1.0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(5, 2, 2, 3);
        add(bottom, gbc);
        // --------------------------------------- top panel (filters, button) --------------
        // filters
        JPanel left = new JPanel();
        TitledBorder titleLeft = BorderFactory.createTitledBorder(loweredEtchedBorder, " Status Filter ");
        titleLeft.setTitleJustification(TitledBorder.LEFT);
        titleLeft.setTitlePosition(TitledBorder.TOP);
        left.setBorder(titleLeft);
        JPanel center = new SeparatedJPanel();
        // Dimension dim = new Dimension(200, 100);
        // center.setMinimumSize(dim);
        top.setLayout(new GridBagLayout());
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = 0;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.gridwidth = 2;
        gbc.anchor = GridBagConstraints.NORTHWEST;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(5, 2, 1, 3);
        top.add(left, gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = 1;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.anchor = GridBagConstraints.NORTHWEST;
        gbc.insets = new Insets(3, 8, 2, 3);
        top.add(getOrphanedButton(), gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 1;
        gbc.gridy = 1;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(4, 8, 2, 3);
        top.add(getRefreshAllButton(), gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 2;
        gbc.gridy = 0;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.gridheight = 2;
        gbc.anchor = GridBagConstraints.NORTH;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(5, 2, 2, 3);
        top.add(center, gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 3;
        gbc.gridy = 0;
        gbc.weightx = 1.0;
        gbc.weighty = 1.0;
        gbc.gridheight = 2;
        gbc.anchor = GridBagConstraints.NORTHEAST;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(2, 2, 2, 3);
        top.add(getPropertiesPanel(), gbc);
        // ------------------------------------ left panel (of top panel) -------------
        left.setLayout(new GridBagLayout());
        int gridy = 0;
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 2, 0, 0);
        left.add(getWaitingButton(), gbc);
        gbc.gridx = 1;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 3);
        JLabel label = new JLabel(waitingIcon);
        label.setText(" ");
        left.add(label, gbc);
        gbc.gridx = 2;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 15, 0, 0);
        left.add(getQueuedButton(), gbc);
        gbc.gridx = 3;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 10);
        label = new JLabel(queuedIcon);
        label.setText(" ");
        left.add(label, gbc);
        // -------------------------------------
        gridy++;
        gbc.gridx = 0;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 2, 0, 0);
        left.add(getDispatchedButton(), gbc);
        gbc.gridx = 1;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 3);
        label = new JLabel(dispatchedIcon);
        label.setText(" ");
        left.add(label, gbc);
        gbc.gridx = 2;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 15, 0, 0);
        left.add(getRunningButton(), gbc);
        gbc.gridx = 3;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 10);
        label = new JLabel(runningIcon);
        label.setText(" ");
        left.add(label, gbc);
        // -------------------------------------
        gridy++;
        gbc.gridx = 0;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 2, 0, 0);
        left.add(getCompletedButton(), gbc);
        gbc.gridx = 1;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 3);
        label = new JLabel(completedIcon);
        label.setText(" ");
        left.add(label, gbc);
        gbc.gridx = 2;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 15, 0, 0);
        left.add(getFailedButton(), gbc);
        gbc.gridx = 3;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 10);
        label = new JLabel(failedIcon);
        label.setText(" ");
        left.add(label, gbc);
        // -------------------------------------
        gridy++;
        gbc.gridx = 0;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(0, 2, 0, 0);
        left.add(getStoppedButton(), gbc);
        gbc.gridx = 1;
        gbc.gridy = gridy;
        gbc.weightx = 0;
        gbc.weighty = 0;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(0, 0, 0, 3);
        label = new JLabel(stoppedIcon);
        label.setText(" ");
        left.add(label, gbc);
        // ---------------------------------------- center panel (of top panel) ------------
        center.setLayout(new GridBagLayout());
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = 0;
        gbc.anchor = GridBagConstraints.LINE_START;
        gbc.insets = new Insets(4, 15, 4, 4);
        center.add(new JLabel("Max # of results "), gbc);
        textFieldJobsLimit = new JTextField();
        textFieldJobsLimit.addActionListener(eventHandler);
        // textFieldJobsLimit.getDocument().addDocumentListener(eventHandler);
        textFieldJobsLimit.setText(maxRows + "");
        Dimension d = textFieldJobsLimit.getPreferredSize();
        d.width = 60;
        textFieldJobsLimit.setPreferredSize(d);
        textFieldJobsLimit.setMaximumSize(d);
        textFieldJobsLimit.setMinimumSize(d);
        gbc = new GridBagConstraints();
        gbc.gridx = 1;
        gbc.gridy = 0;
        gbc.anchor = GridBagConstraints.LINE_START;
        gbc.insets = new Insets(4, 0, 4, 4);
        center.add(textFieldJobsLimit, gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = 2;
        gbc.gridwidth = 2;
        gbc.anchor = GridBagConstraints.WEST;
        gbc.fill = java.awt.GridBagConstraints.BOTH;
        gbc.insets = new Insets(4, 11, 2, 4);
        center.add(getSubmitDatePanel(), gbc);
        getCompletedButton().setSelected(false);
        getDispatchedButton().setSelected(true);
        getFailedButton().setSelected(true);
        getQueuedButton().setSelected(true);
        getRunningButton().setSelected(true);
        getStoppedButton().setSelected(true);
        getWaitingButton().setSelected(true);
        getOrphanedButton().setSelected(false);
        getPastMonthRadio().setSelected(true);
        // ----------------------------------------- bottom panel (the table) -------------------
        table = new EditorScrollTable();
        model = new SimulationJobsTableModel(table, this);
        table.setModel(model);
        table.getSelectionModel().addListSelectionListener(eventHandler);
        table.getModel().addTableModelListener(eventHandler);
        table.addMouseMotionListener(new // add toolTipText for each table cell
        MouseMotionAdapter() {

            public void mouseMoved(MouseEvent e) {
                Point p = e.getPoint();
                int row = table.rowAtPoint(p);
                int column = table.columnAtPoint(p);
                table.setToolTipText(String.valueOf(table.getValueAt(row, column)));
            }
        });
        bottom.setLayout(new GridBagLayout());
        gridy = 0;
        gbc = new java.awt.GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = gridy;
        gbc.weightx = 1.0;
        gbc.weighty = 1.0;
        gbc.gridwidth = 8;
        gbc.fill = GridBagConstraints.BOTH;
        gbc.insets = new Insets(4, 4, 4, 4);
        // table.setPreferredScrollableViewportSize(new Dimension(700,350));	// apparently useless
        bottom.add(table.getEnclosingScrollPane(), gbc);
        gridy++;
        gbc = new GridBagConstraints();
        gbc.gridx = 0;
        gbc.gridy = gridy;
        gbc.anchor = GridBagConstraints.LINE_START;
        gbc.insets = new Insets(4, 4, 4, 4);
        bottom.add(new JLabel("Search "), gbc);
        textFieldSearch = new JTextField(70);
        textFieldSearch.addActionListener(eventHandler);
        textFieldSearch.getDocument().addDocumentListener(eventHandler);
        textFieldSearch.putClientProperty("JTextField.variant", "search");
        gbc = new java.awt.GridBagConstraints();
        gbc.weightx = 1.0;
        gbc.gridx = 1;
        gbc.gridy = gridy;
        gbc.gridwidth = 3;
        gbc.anchor = GridBagConstraints.LINE_START;
        gbc.fill = java.awt.GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(4, 0, 4, 4);
        bottom.add(textFieldSearch, gbc);
        // gbc = new GridBagConstraints();
        // gbc.gridx = 4;
        // gbc.gridy = gridy;
        // gbc.fill = GridBagConstraints.HORIZONTAL;
        // gbc.insets = new Insets(4, 4, 4, 10);
        // bottom.add(getShowQuotaButton(), gbc);
        gbc = new GridBagConstraints();
        gbc.gridx = 4;
        gbc.gridy = gridy;
        gbc.fill = GridBagConstraints.HORIZONTAL;
        gbc.insets = new Insets(4, 4, 4, 10);
        bottom.add(countLabel, gbc);
        // renderer for the status icon; the tooltip gives the text
        DefaultScrollTableCellRenderer statusCellRenderer = new DefaultScrollTableCellRenderer() {

            @Override
            public Component getTableCellRendererComponent(JTable table, Object value, boolean isSelected, boolean hasFocus, int row, int column) {
                super.getTableCellRendererComponent(table, value, isSelected, hasFocus, row, column);
                setText((String) value);
                if (table.getModel() instanceof VCellSortTableModel<?>) {
                    Object selectedObject = null;
                    if (table.getModel() == model) {
                        selectedObject = model.getValueAt(row);
                    }
                    if (selectedObject != null && selectedObject instanceof SimpleJobStatus) {
                        SimpleJobStatus js = (SimpleJobStatus) selectedObject;
                        SchedulerStatus ss1 = js.jobStatus.getSchedulerStatus();
                        switch(ss1) {
                            case WAITING:
                                setIcon(waitingIcon);
                                break;
                            case QUEUED:
                                setIcon(queuedIcon);
                                break;
                            case DISPATCHED:
                                setIcon(dispatchedIcon);
                                break;
                            case RUNNING:
                                setIcon(runningIcon);
                                break;
                            case COMPLETED:
                                setIcon(completedIcon);
                                break;
                            case STOPPED:
                                setIcon(stoppedIcon);
                                break;
                            case FAILED:
                                setIcon(failedIcon);
                                break;
                            default:
                                setIcon(failedIcon);
                                break;
                        }
                        // setText("");
                        setToolTipText(ss1.getDescription());
                        setHorizontalTextPosition(SwingConstants.RIGHT);
                    }
                }
                return this;
            }
        };
        // statusCellRenderer.setHorizontalAlignment(JLabel.RIGHT);
        DefaultScrollTableCellRenderer dateTimeCellRenderer = new DefaultScrollTableCellRenderer() {

            @Override
            public Component getTableCellRendererComponent(JTable table, Object value, boolean isSelected, boolean hasFocus, int row, int column) {
                super.getTableCellRendererComponent(table, value, isSelected, hasFocus, row, column);
                setText((String) value);
                if (table.getModel() instanceof VCellSortTableModel<?>) {
                    Object selectedObject = null;
                    if (table.getModel() == model) {
                        selectedObject = model.getValueAt(row);
                    }
                    if (selectedObject != null && selectedObject instanceof SimpleJobStatus) {
                        SimpleJobStatus sjs = (SimpleJobStatus) selectedObject;
                        DateFormat df = new SimpleDateFormat("MM.dd.yyyy HH:MM:SS");
                        Date date = sjs.jobStatus.getSubmitDate();
                        String str = "";
                        if (date != null) {
                            str = df.format(date);
                        }
                        setToolTipText(str);
                    }
                }
                return this;
            }
        };
        DefaultScrollTableCellRenderer hasDataCellRenderer = new DefaultScrollTableCellRenderer() {

            @Override
            public Component getTableCellRendererComponent(JTable table, Object value, boolean isSelected, boolean hasFocus, int row, int column) {
                super.getTableCellRendererComponent(table, value, isSelected, hasFocus, row, column);
                setText((String) value);
                if (table.getModel() instanceof VCellSortTableModel<?>) {
                    Object selectedObject = null;
                    if (table.getModel() == model) {
                        selectedObject = model.getValueAt(row);
                    }
                    if (selectedObject != null && selectedObject instanceof SimpleJobStatus) {
                        SimpleJobStatus sjs = (SimpleJobStatus) selectedObject;
                        if (sjs.jobStatus.hasData()) {
                            setIcon(dataYesIcon);
                        } else {
                            setIcon(dataNoIcon);
                        }
                    }
                }
                return this;
            }
        };
        table.getColumnModel().getColumn(SimulationJobsTableModel.iColStatus).setCellRenderer(statusCellRenderer);
        table.getColumnModel().getColumn(SimulationJobsTableModel.iColSubmitDate).setCellRenderer(dateTimeCellRenderer);
        table.getColumnModel().getColumn(SimulationJobsTableModel.iColHasData).setCellRenderer(hasDataCellRenderer);
        // table.getColumnModel().getColumn(SimulationJobsTableModel.iColDepiction).setMinWidth(400);
        // table.getColumnModel().getColumn(SimulationJobsTableModel.iColStatus).setPreferredWidth(30);
        // table.getColumnModel().getColumn(SimulationJobsTableModel.iColStatus).setMaxWidth(30);
        table.setAutoResizeMode(JTable.AUTO_RESIZE_LAST_COLUMN);
        refreshInterface();
    } catch (java.lang.Throwable ivjExc) {
        handleException(ivjExc);
    }
}

Example 4 with SimpleJobStatus

use of cbit.vcell.server.SimpleJobStatus in project vcell by virtualcell.

the class SimulationJobsTableModel method getValueAt.

@Override
public Object getValueAt(int iRow, int iCol) {
    SimpleJobStatus sjs = getValueAt(iRow);
    if (sjs == null) {
        return null;
    }
    switch(iCol) {
        case iColModelApp:
            if (sjs.simulationDocumentLink instanceof BioModelLink) {
                BioModelLink bml = (BioModelLink) sjs.simulationDocumentLink;
                return "(BM) " + bml.bioModelName + ", (App) " + bml.simContextName;
            } else if (sjs.simulationDocumentLink instanceof MathModelLink) {
                MathModelLink mml = (MathModelLink) sjs.simulationDocumentLink;
                return "(MM) " + mml.mathModelName;
            } else {
                return null;
            }
        case iColSimulation:
            return sjs.simulationMetadata.simname;
        case iColSimId:
            return sjs.simulationMetadata.vcSimID.getSimulationKey().toString() + " / " + sjs.jobStatus.getJobIndex() + " / " + sjs.jobStatus.getTaskID();
        case iColSolver:
            String str = "";
            if (sjs.simulationMetadata.solverTaskDesc != null) {
                str = sjs.simulationMetadata.solverTaskDesc.getSolverDescription() == null ? "" : sjs.simulationMetadata.solverTaskDesc.getSolverDescription().getDisplayLabel();
            }
            return str;
        case iColSubmitDate:
            DateFormat df = new SimpleDateFormat("MM.dd.yyyy");
            // Date date = sjs.jobStatus.getStartDate();
            Date date = sjs.jobStatus.getSubmitDate();
            if (date != null) {
                return df.format(date);
            }
            return null;
        case iColHasData:
            return sjs.jobStatus.hasData() == true ? "Yes" : "No";
        case iColStatus:
            return sjs.jobStatus.getSchedulerStatus().getDescription();
        case iColMessage:
            return sjs.jobStatus.getSimulationMessage().getDisplayMessage();
        case iColSite:
            return sjs.jobStatus.getServerID().toString();
        // return sjs.jobStatus.getComputeHost();
        default:
            return null;
    }
}

Example 5 with SimpleJobStatus

use of cbit.vcell.server.SimpleJobStatus in project vcell by virtualcell.

the class RestDatabaseService method query.

public SimpleJobStatus[] query(SimulationTasksServerResource resource, User vcellUser) throws SQLException, DataAccessException {
    if (vcellUser == null) {
        vcellUser = VCellApiApplication.DUMMY_USER;
    }
    String userID = vcellUser.getName();
    SimpleJobStatusQuerySpec simQuerySpec = new SimpleJobStatusQuerySpec();
    simQuerySpec.userid = userID;
    simQuerySpec.simId = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_SIM_ID);
    simQuerySpec.jobId = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_JOB_ID);
    simQuerySpec.taskId = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_TASK_ID);
    simQuerySpec.computeHost = resource.getQueryValue(SimulationTasksServerResource.PARAM_COMPUTE_HOST);
    simQuerySpec.serverId = resource.getQueryValue(SimulationTasksServerResource.PARAM_SERVER_ID);
    String hasData = resource.getQueryValue(SimulationTasksServerResource.PARAM_HAS_DATA);
    if (hasData != null && hasData.equals("yes")) {
        simQuerySpec.hasData = true;
    } else if (hasData != null && hasData.equals("no")) {
        simQuerySpec.hasData = false;
    } else {
        simQuerySpec.hasData = null;
    }
    simQuerySpec.waiting = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_WAITING, false);
    simQuerySpec.queued = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_QUEUED, false);
    simQuerySpec.dispatched = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_DISPATCHED, false);
    simQuerySpec.running = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_RUNNING, false);
    simQuerySpec.completed = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_COMPLETED, false);
    simQuerySpec.failed = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_FAILED, false);
    simQuerySpec.stopped = resource.getBooleanQueryValue(SimulationTasksServerResource.PARAM_STATUS_STOPPED, false);
    simQuerySpec.submitLowMS = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_SUBMIT_LOW);
    simQuerySpec.submitHighMS = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_SUBMIT_HIGH);
    simQuerySpec.startLowMS = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_START_LOW);
    simQuerySpec.startHighMS = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_START_HIGH);
    simQuerySpec.endLowMS = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_END_LOW);
    simQuerySpec.endHighMS = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_END_HIGH);
    Long startRowParam = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_START_ROW);
    // default
    simQuerySpec.startRow = 1;
    if (startRowParam != null) {
        simQuerySpec.startRow = startRowParam.intValue();
    }
    Long maxRowsParam = resource.getLongQueryValue(SimulationTasksServerResource.PARAM_MAX_ROWS);
    // default
    simQuerySpec.maxRows = 10;
    if (maxRowsParam != null) {
        simQuerySpec.maxRows = maxRowsParam.intValue();
    }
    VCMessageSession rpcSession = vcMessagingService.createProducerSession();
    try {
        UserLoginInfo userLoginInfo = new UserLoginInfo(vcellUser.getName(), null);
        try {
            userLoginInfo.setUser(vcellUser);
        } catch (Exception e) {
            e.printStackTrace();
            throw new DataAccessException(e.getMessage());
        }
        RpcSimServerProxy rpcSimServerProxy = new RpcSimServerProxy(userLoginInfo, rpcSession);
        SimpleJobStatus[] simpleJobStatusArray = rpcSimServerProxy.getSimpleJobStatus(vcellUser, simQuerySpec);
        return simpleJobStatusArray;
    } finally {
        rpcSession.close();
    }
}