Examples with DateParameter com.ibm.cohort.cql.evaluation.parameters.DateParameter used on opensource projects

Example 16 with DateParameter

use of com.ibm.cohort.cql.evaluation.parameters.DateParameter in project quality-measure-and-cohort-service by Alvearie.

the class CohortEvaluationTest method when_serialize_deserialize___properties_are_unchanged.

@Test
public void when_serialize_deserialize___properties_are_unchanged() throws Exception {
    FhirServerConfig dataServerConfig = new FhirServerConfig();
    dataServerConfig.setEndpoint("dataserver");
    FhirServerConfig termServerConfig = new FhirServerConfig();
    termServerConfig.setEndpoint("termserver");
    Map<String, Parameter> parameterOverrides = new HashMap<>();
    parameterOverrides.put("Measurement Period", new IntervalParameter(new DateParameter("2019-07-04"), true, new DateParameter("2020-07-04"), true));
    CohortEvaluation evaluation = new CohortEvaluation();
    evaluation.setDataServerConfig(dataServerConfig);
    evaluation.setTerminologyServerConfig(termServerConfig);
    evaluation.setPatientIds("patientId");
    evaluation.setParameters(parameterOverrides);
    evaluation.setLoggingLevel(CqlDebug.TRACE);
    evaluation.setEntrypoint("test-1.0.0.cql");
    evaluation.setDefineToRun("fakeDefine");
    ObjectMapper om = new ObjectMapper();
    String serialized = om.writeValueAsString(evaluation);
    CohortEvaluation deserialized = om.readValue(serialized, CohortEvaluation.class);
    assertEquals(evaluation, deserialized);
}

Example 17 with DateParameter

use of com.ibm.cohort.cql.evaluation.parameters.DateParameter in project quality-measure-and-cohort-service by Alvearie.

the class MeasureEvaluatorTest method measure_report_generated___named_parameters_on_measure_report.

@Test
public void measure_report_generated___named_parameters_on_measure_report() throws Exception {
    CapabilityStatement metadata = getCapabilityStatement();
    mockFhirResourceRetrieval("/metadata?_format=json", metadata);
    Patient patient = getPatient("123", AdministrativeGender.MALE, "1970-10-10");
    mockFhirResourceRetrieval(patient);
    Library library = mockLibraryRetrieval("TestDummyPopulations", DEFAULT_VERSION, "cql/fhir-measure/test-dummy-populations.xml", ELM_MIME_TYPE);
    Measure measure = getCohortMeasure("CohortMeasureName", library, INITIAL_POPULATION);
    mockFhirResourceRetrieval(measure);
    Map<String, Parameter> parameterMap = new HashMap<>();
    parameterMap.put("integerParam", new IntegerParameter(1));
    parameterMap.put("decimalParam", new DecimalParameter("1.0"));
    parameterMap.put("stringParam", new StringParameter("1"));
    parameterMap.put("booleanParam", new BooleanParameter(false));
    parameterMap.put("datetimeParam", new DatetimeParameter("2020-01-01"));
    parameterMap.put("dateParam", new DateParameter("2020-01-01"));
    parameterMap.put("timeParam", new TimeParameter("01:00:00"));
    parameterMap.put("quantityParam", new QuantityParameter("1.0", "ml"));
    parameterMap.put("ratioParam", new RatioParameter(new QuantityParameter("1.0", "ml"), new QuantityParameter("2.0", "ml")));
    parameterMap.put("codeParam", new CodeParameter("1", "2", "3", "4"));
    parameterMap.put("conceptParam", new ConceptParameter("1", new CodeParameter("1", "2", "3", "4")));
    parameterMap.put("datetimeIntervalParam", new IntervalParameter(new DatetimeParameter("2020-01-01"), true, new DatetimeParameter("2021-01-01"), true));
    parameterMap.put("quantityIntervalParam", new IntervalParameter(new QuantityParameter("1.0", "ml"), true, new QuantityParameter("2.0", "ml"), true));
    MeasureReport report = evaluator.evaluatePatientMeasure(measure.getId(), patient.getId(), parameterMap);
    assertNotNull(report);
    List<String> parameterNames = report.getExtension().stream().filter(x -> x.getUrl().equals(MEASURE_PARAMETER_VALUE_URL)).map(x -> (ParameterDefinition) x.getValue()).map(ParameterDefinition::getName).collect(Collectors.toList());
    // Expected parameters are the ones listed above, plus the special parameters
    // measurement period and product line
    assertEquals(parameterMap.size() + 2, parameterNames.size());
    assertTrue(parameterNames.containsAll(parameterMap.keySet()));
    assertTrue(parameterNames.contains(CDMConstants.MEASUREMENT_PERIOD));
    assertTrue(parameterNames.contains(CDMConstants.PRODUCT_LINE));
}

Example 18 with DateParameter

use of com.ibm.cohort.cql.evaluation.parameters.DateParameter in project quality-measure-and-cohort-service by Alvearie.

the class SparkCqlEvaluatorTest method testReadCqlJobsSuccess.

@Test
public void testReadCqlJobsSuccess() throws Exception {
    IntervalParameter measurementPeriod = new IntervalParameter();
    measurementPeriod.setStart(new DateParameter("2020-01-01")).setEnd(new DateParameter("2021-01-01"));
    IntegerParameter minimumAge = new IntegerParameter(17);
    evaluator.hadoopConfiguration = new SerializableConfiguration(SparkHadoopUtil.get().conf());
    CqlEvaluationRequests requests = evaluator.readJobSpecification("src/test/resources/simple-job/cql-jobs.json");
    assertNotNull(requests);
    assertEquals(measurementPeriod, requests.getGlobalParameters().get("Measurement Period"));
    assertEquals(1, requests.getEvaluations().size());
    assertEquals(minimumAge, requests.getEvaluations().get(0).getParameters().get("MinimumAge"));
}