Examples with Slice org.hl7.elm.r1.Slice used on opensource projects

Example 81 with Slice

use of org.hl7.elm.r1.Slice in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateGridDescription.

private Cell generateGridDescription(HierarchicalTableGenerator gen, Row row, ElementDefinition definition, ElementDefinition fallback, boolean used, String baseURL, String url, StructureDefinition profile, String corePath, String imagePath, boolean root, ElementDefinition valueDefn) throws IOException, FHIRException {
    Cell c = gen.new Cell();
    row.getCells().add(c);
    if (used) {
        if (definition.hasContentReference()) {
            ElementInStructure ed = getElementByName(profile.getSnapshot().getElement(), definition.getContentReference(), profile);
            if (ed == null)
                c.getPieces().add(gen.new Piece(null, "Unknown reference to " + definition.getContentReference(), null));
            else {
                if (ed.getSource() == profile) {
                    c.getPieces().add(gen.new Piece("#" + ed.getElement().getPath(), "See " + ed.getElement().getPath(), null));
                } else {
                    c.getPieces().add(gen.new Piece(ed.getSource().getUserData("path") + "#" + ed.getElement().getPath(), "See " + ed.getSource().getType() + "." + ed.getElement().getPath(), null));
                }
            }
        }
        if (definition.getPath().endsWith("url") && definition.hasFixed()) {
            c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, "\"" + buildJson(definition.getFixed()) + "\"", null).addStyle("color: darkgreen")));
        } else {
            if (url != null) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                String fullUrl = url.startsWith("#") ? baseURL + url : url;
                StructureDefinition ed = context.fetchResource(StructureDefinition.class, url);
                String ref = null;
                if (ed != null) {
                    String p = ed.getUserString("path");
                    if (p != null) {
                        ref = p.startsWith("http:") || igmode ? p : Utilities.pathURL(corePath, p);
                    }
                }
                c.getPieces().add(gen.new Piece(null, "URL: ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(ref, fullUrl, null));
            }
            if (definition.hasSlicing()) {
                if (!c.getPieces().isEmpty()) {
                    c.addPiece(gen.new Piece("br"));
                }
                c.getPieces().add(gen.new Piece(null, "Slice: ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(null, describeSlice(definition.getSlicing()), null));
            }
            if (definition != null) {
                ElementDefinitionBindingComponent binding = null;
                if (valueDefn != null && valueDefn.hasBinding() && !valueDefn.getBinding().isEmpty())
                    binding = valueDefn.getBinding();
                else if (definition.hasBinding())
                    binding = definition.getBinding();
                if (binding != null && !binding.isEmpty()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    BindingResolution br = pkp.resolveBinding(profile, binding, definition.getPath());
                    c.getPieces().add(checkForNoChange(binding, gen.new Piece(null, "Binding: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(binding, gen.new Piece(br.url == null ? null : Utilities.isAbsoluteUrl(br.url) || !pkp.prependLinks() ? br.url : corePath + br.url, br.display, null)));
                    if (binding.hasStrength()) {
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(null, " (", null)));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(corePath + "terminologies.html#" + binding.getStrength().toCode(), binding.getStrength().toCode(), binding.getStrength().getDefinition())));
                        c.getPieces().add(gen.new Piece(null, ")", null));
                    }
                    if (binding.hasDescription() && MarkDownProcessor.isSimpleMarkdown(binding.getDescription())) {
                        c.getPieces().add(gen.new Piece(null, ": ", null));
                        c.addMarkdownNoPara(PublicationHacker.fixBindingDescriptions(context, binding.getDescriptionElement()).asStringValue());
                    }
                }
                for (ElementDefinitionConstraintComponent inv : definition.getConstraint()) {
                    if (!c.getPieces().isEmpty()) {
                        c.addPiece(gen.new Piece("br"));
                    }
                    c.getPieces().add(checkForNoChange(inv, gen.new Piece(null, inv.getKey() + ": ", null).addStyle("font-weight:bold")));
                    if (inv.getHumanElement().hasExtension("http://hl7.org/fhir/StructureDefinition/rendering-markdown")) {
                        c.addMarkdown(inv.getHumanElement().getExtensionString("http://hl7.org/fhir/StructureDefinition/rendering-markdown"));
                    } else {
                        c.getPieces().add(checkForNoChange(inv, gen.new Piece(null, inv.getHuman(), null)));
                    }
                }
                if (definition.hasFixed()) {
                    if (!c.getPieces().isEmpty()) {
                        c.addPiece(gen.new Piece("br"));
                    }
                    c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, "Fixed Value: ", null).addStyle("font-weight:bold")));
                    String s = buildJson(definition.getFixed());
                    String link = null;
                    if (Utilities.isAbsoluteUrl(s))
                        link = pkp.getLinkForUrl(corePath, s);
                    c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(link, s, null).addStyle("color: darkgreen")));
                } else if (definition.hasPattern()) {
                    if (!c.getPieces().isEmpty()) {
                        c.addPiece(gen.new Piece("br"));
                    }
                    c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, "Required Pattern: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, buildJson(definition.getPattern()), null).addStyle("color: darkgreen")));
                } else if (definition.hasExample()) {
                    for (ElementDefinitionExampleComponent ex : definition.getExample()) {
                        if (!c.getPieces().isEmpty()) {
                            c.addPiece(gen.new Piece("br"));
                        }
                        c.getPieces().add(checkForNoChange(ex, gen.new Piece(null, "Example'" + ("".equals("General") ? "" : " " + ex.getLabel() + "'") + ": ", null).addStyle("font-weight:bold")));
                        c.getPieces().add(checkForNoChange(ex, gen.new Piece(null, buildJson(ex.getValue()), null).addStyle("color: darkgreen")));
                    }
                }
                if (definition.hasMaxLength() && definition.getMaxLength() != 0) {
                    if (!c.getPieces().isEmpty()) {
                        c.addPiece(gen.new Piece("br"));
                    }
                    c.getPieces().add(checkForNoChange(definition.getMaxLengthElement(), gen.new Piece(null, "Max Length: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(definition.getMaxLengthElement(), gen.new Piece(null, Integer.toString(definition.getMaxLength()), null).addStyle("color: darkgreen")));
                }
                if (profile != null) {
                    for (StructureDefinitionMappingComponent md : profile.getMapping()) {
                        if (md.hasExtension(ToolingExtensions.EXT_TABLE_NAME)) {
                            ElementDefinitionMappingComponent map = null;
                            for (ElementDefinitionMappingComponent m : definition.getMapping()) if (m.getIdentity().equals(md.getIdentity()))
                                map = m;
                            if (map != null) {
                                for (int i = 0; i < definition.getMapping().size(); i++) {
                                    c.addPiece(gen.new Piece("br"));
                                    c.getPieces().add(gen.new Piece(null, ToolingExtensions.readStringExtension(md, ToolingExtensions.EXT_TABLE_NAME) + ": " + map.getMap(), null));
                                }
                            }
                        }
                    }
                }
                if (definition.hasDefinition()) {
                    if (!c.getPieces().isEmpty()) {
                        c.addPiece(gen.new Piece("br"));
                    }
                    c.getPieces().add(gen.new Piece(null, "Definition: ", null).addStyle("font-weight:bold"));
                    c.addPiece(gen.new Piece("br"));
                    c.addMarkdown(definition.getDefinition());
                // c.getPieces().add(checkForNoChange(definition.getCommentElement(), gen.new Piece(null, definition.getComment(), null)));
                }
                if (definition.getComment() != null) {
                    if (!c.getPieces().isEmpty()) {
                        c.addPiece(gen.new Piece("br"));
                    }
                    c.getPieces().add(gen.new Piece(null, "Comments: ", null).addStyle("font-weight:bold"));
                    c.addPiece(gen.new Piece("br"));
                    c.addMarkdown(definition.getComment());
                // c.getPieces().add(checkForNoChange(definition.getCommentElement(), gen.new Piece(null, definition.getComment(), null)));
                }
            }
        }
    }
    return c;
}

Example 82 with Slice

use of org.hl7.elm.r1.Slice in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method genElement.

private Row genElement(String defPath, HierarchicalTableGenerator gen, List<Row> rows, ElementDefinition element, List<ElementDefinition> all, List<StructureDefinition> profiles, boolean showMissing, String profileBaseFileName, Boolean extensions, boolean snapshot, String corePath, String imagePath, boolean root, boolean logicalModel, boolean isConstraintMode, boolean allInvariants, Row slicingRow, boolean mustSupport, RenderingContext rc) throws IOException, FHIRException {
    Row originalRow = slicingRow;
    StructureDefinition profile = profiles == null ? null : profiles.get(profiles.size() - 1);
    Row typesRow = null;
    List<ElementDefinition> children = getChildren(all, element);
    if (!onlyInformationIsMapping(all, element)) {
        Row row = gen.new Row();
        row.setAnchor(element.getPath());
        row.setColor(getRowColor(element, isConstraintMode));
        if (element.hasSlicing())
            row.setLineColor(1);
        else if (element.hasSliceName())
            row.setLineColor(2);
        else
            row.setLineColor(0);
        boolean hasDef = element != null;
        boolean ext = false;
        if (tail(element.getPath()).equals("extension")) {
            if (element.hasType() && element.getType().get(0).hasProfile() && extensionIsComplex(element.getType().get(0).getProfile().get(0).getValue()))
                row.setIcon("icon_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
            else
                row.setIcon("icon_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
            ext = true;
        } else if (tail(element.getPath()).equals("modifierExtension")) {
            if (element.hasType() && element.getType().get(0).hasProfile() && extensionIsComplex(element.getType().get(0).getProfile().get(0).getValue()))
                row.setIcon("icon_modifier_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
            else
                row.setIcon("icon_modifier_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
        } else if (!hasDef || element.getType().size() == 0) {
            if (root && context.getResourceNames().contains(profile.getType())) {
                row.setIcon("icon_resource.png", HierarchicalTableGenerator.TEXT_ICON_RESOURCE);
            } else {
                row.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
            }
        } else if (hasDef && element.getType().size() > 1) {
            if (allAreReference(element.getType())) {
                row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
            } else {
                row.setIcon("icon_choice.gif", HierarchicalTableGenerator.TEXT_ICON_CHOICE);
                typesRow = row;
            }
        } else if (hasDef && element.getType().get(0).getWorkingCode() != null && element.getType().get(0).getWorkingCode().startsWith("@")) {
            row.setIcon("icon_reuse.png", HierarchicalTableGenerator.TEXT_ICON_REUSE);
        } else if (hasDef && isPrimitive(element.getType().get(0).getWorkingCode())) {
            row.setIcon("icon_primitive.png", HierarchicalTableGenerator.TEXT_ICON_PRIMITIVE);
        } else if (hasDef && element.getType().get(0).hasTarget()) {
            row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
        } else if (hasDef && isDataType(element.getType().get(0).getWorkingCode())) {
            row.setIcon("icon_datatype.gif", HierarchicalTableGenerator.TEXT_ICON_DATATYPE);
        } else if (hasDef && Utilities.existsInList(element.getType().get(0).getWorkingCode(), "Element", "BackboneElement")) {
            row.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
        } else {
            row.setIcon("icon_resource.png", HierarchicalTableGenerator.TEXT_ICON_RESOURCE);
        }
        if (element.hasUserData("render.opaque")) {
            row.setOpacity("0.5");
        }
        UnusedTracker used = new UnusedTracker();
        String ref = defPath == null ? null : defPath + element.getId();
        String sName = tail(element.getPath());
        if (element.hasSliceName())
            sName = sName + ":" + element.getSliceName();
        used.used = true;
        if (logicalModel && element.hasRepresentation(PropertyRepresentation.XMLATTR))
            sName = "@" + sName;
        Cell nc = genElementNameCell(gen, element, profileBaseFileName, snapshot, corePath, imagePath, root, logicalModel, allInvariants, profile, typesRow, row, hasDef, ext, used, ref, sName, all);
        genElementCells(gen, element, profileBaseFileName, snapshot, corePath, imagePath, root, logicalModel, allInvariants, profile, typesRow, row, hasDef, ext, used, ref, sName, nc, mustSupport, true, rc);
        if (element.hasSlicing()) {
            if (standardExtensionSlicing(element)) {
                // doesn't matter whether we have a type, we're used if we're setting up slicing ... element.hasType() && element.getType().get(0).hasProfile();
                used.used = true;
                // ?
                showMissing = false;
            } else {
                row.setIcon("icon_slice.png", HierarchicalTableGenerator.TEXT_ICON_SLICE);
                slicingRow = row;
                for (Cell cell : row.getCells()) for (Piece p : cell.getPieces()) {
                    p.addStyle("font-style: italic");
                }
            }
        } else if (element.hasSliceName()) {
            row.setIcon("icon_slice_item.png", HierarchicalTableGenerator.TEXT_ICON_SLICE_ITEM);
        }
        if (used.used || showMissing)
            rows.add(row);
        if (!used.used && !element.hasSlicing()) {
            for (Cell cell : row.getCells()) for (Piece p : cell.getPieces()) {
                p.setStyle("text-decoration:line-through");
                p.setReference(null);
            }
        } else {
            if (slicingRow != originalRow && !children.isEmpty()) {
                // we've entered a slice; we're going to create a holder row for the slice children
                Row hrow = gen.new Row();
                hrow.setAnchor(element.getPath());
                hrow.setColor(getRowColor(element, isConstraintMode));
                hrow.setLineColor(1);
                hrow.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
                hrow.getCells().add(gen.new Cell(null, null, sName + ":All Slices", "", null));
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell(null, null, "Content/Rules for all slices", "", null));
                row.getSubRows().add(hrow);
                row = hrow;
            }
            if (typesRow != null && !children.isEmpty()) {
                // we've entered a typing slice; we're going to create a holder row for the all types children
                Row hrow = gen.new Row();
                hrow.setAnchor(element.getPath());
                hrow.setColor(getRowColor(element, isConstraintMode));
                hrow.setLineColor(1);
                hrow.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
                hrow.getCells().add(gen.new Cell(null, null, sName + ":All Types", "", null));
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell(null, null, "Content/Rules for all Types", "", null));
                row.getSubRows().add(hrow);
                row = hrow;
            }
            Row currRow = row;
            List<ElementChoiceGroup> groups = readChoices(element, children);
            boolean isExtension = Utilities.existsInList(tail(element.getPath()), "extension", "modifierExtension");
            for (ElementDefinition child : children) {
                if (!child.hasSliceName()) {
                    currRow = row;
                }
                Row childRow = chooseChildRowByGroup(gen, currRow, groups, child, element, isConstraintMode);
                if (logicalModel || !child.getPath().endsWith(".id") || (child.getPath().endsWith(".id") && (profile != null) && (profile.getDerivation() == TypeDerivationRule.CONSTRAINT))) {
                    currRow = genElement(defPath, gen, childRow.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, isExtension, snapshot, corePath, imagePath, false, logicalModel, isConstraintMode, allInvariants, currRow, mustSupport, rc);
                }
            }
        // if (!snapshot && (extensions == null || !extensions))
        // for (ElementDefinition child : children)
        // if (child.getPath().endsWith(".extension") || child.getPath().endsWith(".modifierExtension"))
        // genElement(defPath, gen, row.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, true, false, corePath, imagePath, false, logicalModel, isConstraintMode, allInvariants);
        }
        if (typesRow != null) {
            makeChoiceRows(typesRow.getSubRows(), element, gen, corePath, profileBaseFileName, mustSupport);
        }
    }
    return slicingRow;
}

Example 83 with Slice

use of org.hl7.elm.r1.Slice in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method determineSlicing.

private void determineSlicing(ElementDefinition slicer, List<ElementDefinition> slices) {
    // first, name them
    int i = 0;
    for (ElementDefinition ed : slices) {
        if (ed.hasUserData("slice-name")) {
            ed.setSliceName(ed.getUserString("slice-name"));
        } else {
            i++;
            ed.setSliceName("slice-" + Integer.toString(i));
        }
    }
    // right now, we hard code this...
    if (slicer.getPath().endsWith(".extension") || slicer.getPath().endsWith(".modifierExtension"))
        slicer.getSlicing().addDiscriminator().setType(DiscriminatorType.VALUE).setPath("url");
    else if (slicer.getPath().equals("DiagnosticReport.result"))
        slicer.getSlicing().addDiscriminator().setType(DiscriminatorType.VALUE).setPath("reference.code");
    else if (slicer.getPath().equals("Observation.related"))
        slicer.getSlicing().addDiscriminator().setType(DiscriminatorType.VALUE).setPath("target.reference.code");
    else if (slicer.getPath().equals("Bundle.entry"))
        slicer.getSlicing().addDiscriminator().setType(DiscriminatorType.VALUE).setPath("resource.@profile");
    else
        throw new Error("No slicing for " + slicer.getPath());
}