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Example 1 with Parameters

use of org.hl7.fhir.dstu2.model.Parameters in project beneficiary-fhir-data by CMSgov.

the class ExplanationOfBenefitResourceProvider method findByPatient.

/**
 * Adds support for the FHIR "search" operation for {@link ExplanationOfBenefit}s, allowing users
 * to search by {@link ExplanationOfBenefit#getPatient()}.
 *
 * <p>The {@link Search} annotation indicates that this method supports the search operation.
 * There may be many different methods annotated with this {@link Search} annotation, to support
 * many different search criteria.
 *
 * @param patient a {@link ReferenceParam} for the {@link ExplanationOfBenefit#getPatient()} to
 *     try and find matches for {@link ExplanationOfBenefit}s
 * @param type a list of {@link ClaimType} to include in the result. Defaults to all types.
 * @param startIndex an {@link OptionalParam} for the startIndex (or offset) used to determine
 *     pagination
 * @param excludeSamhsa an {@link OptionalParam} that, if <code>"true"</code>, will use {@link
 *     Stu3EobSamhsaMatcher} to filter out all SAMHSA-related claims from the results
 * @param lastUpdated an {@link OptionalParam} that specifies a date range for the lastUpdated
 *     field.
 * @param serviceDate an {@link OptionalParam} that specifies a date range for {@link
 *     ExplanationOfBenefit}s that completed
 * @param requestDetails a {@link RequestDetails} containing the details of the request URL, used
 *     to parse out pagination values
 * @return Returns a {@link Bundle} of {@link ExplanationOfBenefit}s, which may contain multiple
 *     matching resources, or may also be empty.
 */
@Search
@Trace
public Bundle findByPatient(@RequiredParam(name = ExplanationOfBenefit.SP_PATIENT) @Description(shortDefinition = "The patient identifier to search for") ReferenceParam patient, @OptionalParam(name = "type") @Description(shortDefinition = "A list of claim types to include") TokenAndListParam type, @OptionalParam(name = "startIndex") @Description(shortDefinition = "The offset used for result pagination") String startIndex, @OptionalParam(name = "excludeSAMHSA") @Description(shortDefinition = "If true, exclude all SAMHSA-related resources") String excludeSamhsa, @OptionalParam(name = "_lastUpdated") @Description(shortDefinition = "Include resources last updated in the given range") DateRangeParam lastUpdated, @OptionalParam(name = "service-date") @Description(shortDefinition = "Include resources that completed in the given range") DateRangeParam serviceDate, RequestDetails requestDetails) {
    /*
     * startIndex is an optional parameter here because it must be declared in the
     * event it is passed in. However, it is not being used here because it is also
     * contained within requestDetails and parsed out along with other parameters
     * later.
     */
    String beneficiaryId = patient.getIdPart();
    Set<ClaimType> claimTypes = parseTypeParam(type);
    Boolean includeTaxNumbers = returnIncludeTaxNumbers(requestDetails);
    OffsetLinkBuilder paging = new OffsetLinkBuilder(requestDetails, "/ExplanationOfBenefit?");
    Operation operation = new Operation(Operation.Endpoint.V1_EOB);
    operation.setOption("by", "patient");
    operation.setOption("types", (claimTypes.size() == ClaimType.values().length) ? "*" : claimTypes.stream().sorted(Comparator.comparing(ClaimType::name)).collect(Collectors.toList()).toString());
    operation.setOption("IncludeTaxNumbers", "" + includeTaxNumbers);
    operation.setOption("pageSize", paging.isPagingRequested() ? "" + paging.getPageSize() : "*");
    operation.setOption("_lastUpdated", Boolean.toString(lastUpdated != null && !lastUpdated.isEmpty()));
    operation.setOption("service-date", Boolean.toString(serviceDate != null && !serviceDate.isEmpty()));
    operation.publishOperationName();
    List<IBaseResource> eobs = new ArrayList<IBaseResource>();
    // Optimize when the lastUpdated parameter is specified and result set is empty
    if (loadedFilterManager.isResultSetEmpty(beneficiaryId, lastUpdated)) {
        return TransformerUtils.createBundle(paging, eobs, loadedFilterManager.getTransactionTime());
    }
    /*
     * The way our JPA/SQL schema is setup, we have to run a separate search for
     * each claim type, then combine the results. It's not super efficient, but it's
     * also not so inefficient that it's worth fixing.
     */
    if (claimTypes.contains(ClaimType.CARRIER))
        eobs.addAll(transformToEobs(ClaimType.CARRIER, findClaimTypeByPatient(ClaimType.CARRIER, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.DME))
        eobs.addAll(transformToEobs(ClaimType.DME, findClaimTypeByPatient(ClaimType.DME, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.HHA))
        eobs.addAll(transformToEobs(ClaimType.HHA, findClaimTypeByPatient(ClaimType.HHA, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.HOSPICE))
        eobs.addAll(transformToEobs(ClaimType.HOSPICE, findClaimTypeByPatient(ClaimType.HOSPICE, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.INPATIENT))
        eobs.addAll(transformToEobs(ClaimType.INPATIENT, findClaimTypeByPatient(ClaimType.INPATIENT, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.OUTPATIENT))
        eobs.addAll(transformToEobs(ClaimType.OUTPATIENT, findClaimTypeByPatient(ClaimType.OUTPATIENT, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.PDE))
        eobs.addAll(transformToEobs(ClaimType.PDE, findClaimTypeByPatient(ClaimType.PDE, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (claimTypes.contains(ClaimType.SNF))
        eobs.addAll(transformToEobs(ClaimType.SNF, findClaimTypeByPatient(ClaimType.SNF, beneficiaryId, lastUpdated, serviceDate), Optional.of(includeTaxNumbers)));
    if (Boolean.parseBoolean(excludeSamhsa))
        filterSamhsa(eobs);
    eobs.sort(ExplanationOfBenefitResourceProvider::compareByClaimIdThenClaimType);
    // Add bene_id to MDC logs
    TransformerUtils.logBeneIdToMdc(Arrays.asList(beneficiaryId));
    return TransformerUtils.createBundle(paging, eobs, loadedFilterManager.getTransactionTime());
}
Also used : OffsetLinkBuilder(gov.cms.bfd.server.war.commons.OffsetLinkBuilder) ArrayList(java.util.ArrayList) Operation(gov.cms.bfd.server.war.Operation) IBaseResource(org.hl7.fhir.instance.model.api.IBaseResource) Trace(com.newrelic.api.agent.Trace) Search(ca.uhn.fhir.rest.annotation.Search)

Example 2 with Parameters

use of org.hl7.fhir.dstu2.model.Parameters in project beneficiary-fhir-data by CMSgov.

the class AbstractR4ResourceProvider method createBundleFor.

/**
 * Creates a Bundle of resources for the given data using the given {@link ResourceTypeV2}.
 *
 * @param resourceTypes The {@link ResourceTypeV2} data to retrieve.
 * @param mbi The mbi to look up associated data for.
 * @param isHashed Denotes if the given mbi is hashed.
 * @param lastUpdated Date range of desired lastUpdate values to retrieve data for.
 * @param serviceDate Date range of the desired service date to retrieve data for.
 * @return A Bundle with data found using the provided parameters.
 */
@VisibleForTesting
Bundle createBundleFor(Set<ResourceTypeV2<T>> resourceTypes, String mbi, boolean isHashed, boolean excludeSamhsa, DateRangeParam lastUpdated, DateRangeParam serviceDate) {
    List<T> resources = new ArrayList<>();
    for (ResourceTypeV2<T> type : resourceTypes) {
        List<?> entities;
        entities = claimDao.findAllByMbiAttribute(type.getEntityClass(), type.getEntityMbiRecordAttribute(), mbi, isHashed, lastUpdated, serviceDate, type.getEntityEndDateAttribute());
        resources.addAll(entities.stream().filter(e -> !excludeSamhsa || hasNoSamhsaData(metricRegistry, e)).map(e -> type.getTransformer().transform(metricRegistry, e)).collect(Collectors.toList()));
    }
    Bundle bundle = new Bundle();
    resources.forEach(c -> {
        Bundle.BundleEntryComponent entry = bundle.addEntry();
        entry.setResource((Resource) c);
    });
    return bundle;
}
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Example 3 with Parameters

use of org.hl7.fhir.dstu2.model.Parameters in project beneficiary-fhir-data by CMSgov.

the class TransformerUtilsV2 method findOrAddBenefitBalance.

/**
 * @param eob the {@link ExplanationOfBenefit} that the {@link BenefitComponent} should be part of
 * @param benefitCategory the {@link BenefitCategory} to map to {@link
 *     BenefitBalanceComponent#getCategory()}
 * @return the already-existing {@link BenefitBalanceComponent} that matches the specified
 *     parameters, or a new one
 */
private static BenefitBalanceComponent findOrAddBenefitBalance(ExplanationOfBenefit eob, ExBenefitcategory benefitCategory) {
    Optional<BenefitBalanceComponent> matchingBenefitBalance = eob.getBenefitBalance().stream().filter(bb -> isCodeInConcept(bb.getCategory(), benefitCategory.getSystem(), benefitCategory.toCode())).findAny();
    // Found an existing BenefitBalance that matches the coding system
    if (matchingBenefitBalance.isPresent()) {
        return matchingBenefitBalance.get();
    }
    CodeableConcept benefitCategoryConcept = new CodeableConcept();
    benefitCategoryConcept.addCoding().setSystem(benefitCategory.getSystem()).setCode(benefitCategory.toCode()).setDisplay(benefitCategory.getDisplay());
    BenefitBalanceComponent newBenefitBalance = new BenefitBalanceComponent(benefitCategoryConcept);
    eob.addBenefitBalance(newBenefitBalance);
    return newBenefitBalance;
}
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Example 4 with Parameters

use of org.hl7.fhir.dstu2.model.Parameters in project beneficiary-fhir-data by CMSgov.

the class ExplanationOfBenefitResourceProviderIT method searchForEobsWithPagingWithNegativePagingParameters.

/**
 * Verifies that {@link ExplanationOfBenefitResourceProvider#findByPatient} works as expected for
 * a {@link Patient} that does exist in the DB, with paging, using negative values for page size
 * and start index parameters. This test expects to receive a BadRequestException, as negative
 * values should result in an HTTP 400.
 *
 * @throws FHIRException (indicates test failure)
 */
@Test
public void searchForEobsWithPagingWithNegativePagingParameters() throws FHIRException {
    List<Object> loadedRecords = ServerTestUtils.get().loadData(Arrays.asList(StaticRifResourceGroup.SAMPLE_A.getResources()));
    IGenericClient fhirClient = ServerTestUtils.get().createFhirClient();
    Beneficiary beneficiary = loadedRecords.stream().filter(r -> r instanceof Beneficiary).map(r -> (Beneficiary) r).findFirst().get();
    /*
     * FIXME: At this time we cannot check for negative page size parameters due to
     * the same bug described in
     * https://github.com/jamesagnew/hapi-fhir/issues/1074.
     */
    Bundle searchResults = fhirClient.search().forResource(ExplanationOfBenefit.class).where(ExplanationOfBenefit.PATIENT.hasId(TransformerUtils.buildPatientId(beneficiary))).returnBundle(Bundle.class).execute();
    assertNotNull(searchResults);
    /*
     * Access a created link of this bundle, providing the startIndex but not the
     * pageSize (count).
     */
    assertThrows(InvalidRequestException.class, () -> {
        fhirClient.loadPage().byUrl(searchResults.getLink(Bundle.LINK_SELF).getUrl() + "&startIndex=-1").andReturnBundle(Bundle.class).execute();
    });
}
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Example 5 with Parameters

use of org.hl7.fhir.dstu2.model.Parameters in project kindling by HL7.

the class Publisher method produceMap.

private void produceMap(String name, SectionTracker st, ResourceDefn res) throws Exception {
    File f = new File(Utilities.path(page.getFolders().rootDir, "implementations", "r3maps", "R4toR3", name + ".map"));
    if (!f.exists())
        return;
    String n = name.toLowerCase();
    Map<String, String> values = new HashMap<String, String>();
    values.put("conv-status", page.r3r4StatusForResource(name));
    String fwds = TextFile.fileToString(Utilities.path(page.getFolders().rootDir, "implementations", "r3maps", "R3toR4", page.r3nameForResource(name) + ".map"));
    String bcks = TextFile.fileToString(Utilities.path(page.getFolders().rootDir, "implementations", "r3maps", "R4toR3", name + ".map"));
    values.put("fwds", Utilities.escapeXml(fwds));
    values.put("bcks", Utilities.escapeXml(bcks));
    values.put("fwds-status", "");
    values.put("bcks-status", "");
    values.put("r3errs", Utilities.escapeXml(page.getR3R4ValidationErrors(name)));
    try {
        new StructureMapUtilities(page.getWorkerContext()).parse(fwds, page.r3nameForResource(name) + ".map");
    } catch (FHIRException e) {
        values.put("fwds-status", "<p style=\"background-color: #ffb3b3; border:1px solid maroon; padding: 5px;\">This script does not compile: " + e.getMessage() + "</p>\r\n");
    }
    try {
        new StructureMapUtilities(page.getWorkerContext()).parse(bcks, name + ".map");
    } catch (FHIRException e) {
        values.put("bcks-status", "<p style=\"background-color: #ffb3b3; border:1px solid maroon; padding: 5px;\">This script does not compile: " + e.getMessage() + "</p>\r\n");
    } catch (IllegalArgumentException e) {
        values.put("bcks-status", "<p style=\"background-color: #ffb3b3; border:1px solid maroon; padding: 5px;\">This script does not compile: " + e.getMessage() + "</p>\r\n");
    }
    if (page.getDefinitions().hasResource(name) || (page.getDefinitions().getBaseResources().containsKey(name) && !name.equals("Parameters"))) {
        String src = TextFile.fileToString(page.getFolders().templateDir + "template-version-maps.html");
        TextFile.stringToFile(insertSectionNumbers(page.processResourceIncludes(n, page.getDefinitions().getResourceByName(name), null, null, null, null, null, src, null, null, "res-R3/R4 Conversions", n + "-version-maps.html", null, values, res.getWg(), null), st, n + "-version-maps.html", 0, null), page.getFolders().dstDir + n + "-version-maps.html");
        page.getHTMLChecker().registerFile(n + "-version-maps.html", "Version Maps for " + name, HTMLLinkChecker.XHTML_TYPE, true);
    }
}
Also used : LinkedHashMap(java.util.LinkedHashMap) HashMap(java.util.HashMap) IniFile(org.hl7.fhir.utilities.IniFile) File(java.io.File) CSFile(org.hl7.fhir.utilities.CSFile) TextFile(org.hl7.fhir.utilities.TextFile) FHIRException(org.hl7.fhir.exceptions.FHIRException) StructureMapUtilities(org.hl7.fhir.r5.utils.structuremap.StructureMapUtilities)

Aggregations

Parameters (org.hl7.fhir.r4.model.Parameters)105 Test (org.junit.jupiter.api.Test)96 SpringBootTest (org.springframework.boot.test.context.SpringBootTest)71 StringType (org.hl7.fhir.r4.model.StringType)68 RestIntegrationTest (org.opencds.cqf.ruler.test.RestIntegrationTest)61 HashMap (java.util.HashMap)58 ArrayList (java.util.ArrayList)53 FHIRException (org.hl7.fhir.exceptions.FHIRException)48 IOException (java.io.IOException)44 Parameters (org.hl7.fhir.dstu3.model.Parameters)41 Bundle (org.hl7.fhir.r4.model.Bundle)34 Measure (org.hl7.fhir.r4.model.Measure)31 Path (javax.ws.rs.Path)25 Produces (javax.ws.rs.Produces)25 Patient (org.hl7.fhir.r4.model.Patient)25 FileNotFoundException (java.io.FileNotFoundException)24 List (java.util.List)24 JsonObject (javax.json.JsonObject)23 GET (javax.ws.rs.GET)23 ExtraParameters (org.apache.camel.component.fhir.api.ExtraParameters)23