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Example 31 with ImplementationGuide

use of org.hl7.fhir.dstu3.model.ImplementationGuide in project org.hl7.fhir.core by hapifhir.

the class CapabilityStatementComparer method compare.

public CapabilityStatementComparison compare(CapabilityStatement left, CapabilityStatement right) {
    if (left == null)
        throw new DefinitionException("No CapabilityStatement provided (left)");
    if (right == null)
        throw new DefinitionException("No CapabilityStatement provided (right)");
    CapabilityStatementComparison res = new CapabilityStatementComparison(left, right);
    session.identify(res);
    CapabilityStatement cs = new CapabilityStatement();
    res.setUnion(cs);
    session.identify(cs);
    cs.setName("Union" + left.getName() + "And" + right.getName());
    cs.setTitle("Union of " + left.getTitle() + " And " + right.getTitle());
    cs.setStatus(left.getStatus());
    cs.setDate(new Date());
    CapabilityStatement cs1 = new CapabilityStatement();
    res.setIntersection(cs1);
    session.identify(cs1);
    cs1.setName("Intersection" + left.getName() + "And" + right.getName());
    cs1.setTitle("Intersection of " + left.getTitle() + " And " + right.getTitle());
    cs1.setStatus(left.getStatus());
    cs1.setDate(new Date());
    compareMetadata(left, right, res.getMetadata(), res);
    comparePrimitives("kind", left.getKindElement(), right.getKindElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    compareCanonicalList("instantiates", left.getInstantiates(), right.getInstantiates(), res.getMetadata(), IssueSeverity.ERROR, res, cs.getInstantiates(), cs1.getInstantiates());
    compareCanonicalList("imports", left.getImports(), right.getImports(), res.getMetadata(), IssueSeverity.ERROR, res, cs.getImports(), cs1.getImports());
    comparePrimitives("software.name", left.getSoftware().getNameElement(), right.getSoftware().getNameElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    comparePrimitives("software.version", left.getSoftware().getVersionElement(), right.getSoftware().getVersionElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    comparePrimitives("software.releaseDate", left.getSoftware().getReleaseDateElement(), right.getSoftware().getReleaseDateElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    comparePrimitives("implementation.description", left.getImplementation().getDescriptionElement(), right.getImplementation().getDescriptionElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    comparePrimitives("implementation.url", left.getImplementation().getUrlElement(), right.getImplementation().getUrlElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    comparePrimitives("fhirVersion", left.getFhirVersionElement(), right.getFhirVersionElement(), res.getMetadata(), IssueSeverity.ERROR, res);
    compareCodeList("format", left.getFormat(), right.getFormat(), res.getMetadata(), IssueSeverity.ERROR, res, cs.getFormat(), cs1.getFormat());
    compareCodeList("patchFormat", left.getPatchFormat(), right.getPatchFormat(), res.getMetadata(), IssueSeverity.ERROR, res, cs.getPatchFormat(), cs1.getPatchFormat());
    compareCanonicalList("implementationGuide", left.getImplementationGuide(), right.getImplementationGuide(), res.getMetadata(), IssueSeverity.ERROR, res, cs.getImplementationGuide(), cs1.getImplementationGuide());
    compareRests(left.getRest(), right.getRest(), res.getCombined(), res.getUnion().getRest(), res.getIntersection().getRest(), res.getUnion(), res.getIntersection(), res, "CapabilityStatement.rest");
    return res;
}
Also used : CapabilityStatement(org.hl7.fhir.r4b.model.CapabilityStatement) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) Date(java.util.Date)

Example 32 with ImplementationGuide

use of org.hl7.fhir.dstu3.model.ImplementationGuide in project org.hl7.fhir.core by hapifhir.

the class NPMPackageGenerator method buildPackageJson.

private void buildPackageJson(String canonical, PackageType kind, String web, Date date, ImplementationGuide ig, List<String> fhirVersion, boolean notForPublication) throws FHIRException, IOException {
    String dtHuman = new SimpleDateFormat("EEE, MMM d, yyyy HH:mmZ", new Locale("en", "US")).format(date);
    String dt = new SimpleDateFormat("yyyyMMddHHmmss").format(date);
    CommaSeparatedStringBuilder b = new CommaSeparatedStringBuilder();
    if (!ig.hasPackageId()) {
        b.append("packageId");
    }
    if (!ig.hasVersion()) {
        b.append("version");
    }
    if (!ig.hasFhirVersion()) {
        b.append("fhirVersion");
    }
    if (!ig.hasLicense()) {
        b.append("license");
    }
    for (ImplementationGuideDependsOnComponent d : ig.getDependsOn()) {
        if (!d.hasVersion()) {
            b.append("dependsOn.version(" + d.getUri() + ")");
        }
    }
    JsonObject npm = new JsonObject();
    npm.addProperty("name", ig.getPackageId());
    npm.addProperty("version", ig.getVersion());
    igVersion = ig.getVersion();
    npm.addProperty("tools-version", ToolsVersion.TOOLS_VERSION);
    npm.addProperty("type", kind.getCode());
    npm.addProperty("date", dt);
    if (ig.hasLicense()) {
        npm.addProperty("license", ig.getLicense().toCode());
    }
    npm.addProperty("canonical", canonical);
    if (notForPublication) {
        npm.addProperty("notForPublication", true);
    }
    npm.addProperty("url", web);
    if (ig.hasTitle()) {
        npm.addProperty("title", ig.getTitle());
    }
    if (ig.hasDescription()) {
        npm.addProperty("description", ig.getDescription() + " (built " + dtHuman + timezone() + ")");
    }
    JsonArray vl = new JsonArray();
    npm.add("fhirVersions", vl);
    for (String v : fhirVersion) {
        vl.add(new JsonPrimitive(v));
    }
    if (kind != PackageType.CORE) {
        JsonObject dep = new JsonObject();
        npm.add("dependencies", dep);
        for (String v : fhirVersion) {
            String vp = packageForVersion(v);
            if (vp != null) {
                dep.addProperty(vp, v);
            }
        }
        for (ImplementationGuideDependsOnComponent d : ig.getDependsOn()) {
            dep.addProperty(d.getPackageId(), d.getVersion());
        }
    }
    if (ig.hasPublisher()) {
        npm.addProperty("author", ig.getPublisher());
    }
    JsonArray m = new JsonArray();
    for (ContactDetail t : ig.getContact()) {
        String email = email(t.getTelecom());
        String url = url(t.getTelecom());
        if (t.hasName() & (email != null || url != null)) {
            JsonObject md = new JsonObject();
            m.add(md);
            md.addProperty("name", t.getName());
            if (email != null)
                md.addProperty("email", email);
            if (url != null)
                md.addProperty("url", url);
        }
    }
    if (m.size() > 0)
        npm.add("maintainers", m);
    if (ig.getManifest().hasRendering())
        npm.addProperty("homepage", ig.getManifest().getRendering());
    JsonObject dir = new JsonObject();
    npm.add("directories", dir);
    dir.addProperty("lib", "package");
    dir.addProperty("example", "example");
    Gson gson = new GsonBuilder().setPrettyPrinting().create();
    String json = gson.toJson(npm);
    try {
        addFile(Category.RESOURCE, "package.json", json.getBytes("UTF-8"));
    } catch (UnsupportedEncodingException e) {
    }
    packageJ = npm;
    packageManifest = new JsonObject();
    packageManifest.addProperty("version", ig.getVersion());
    JsonArray fv = new JsonArray();
    for (String v : fhirVersion) {
        fv.add(v);
    }
    packageManifest.add("fhirVersion", fv);
    packageManifest.addProperty("date", dt);
    packageManifest.addProperty("name", ig.getPackageId());
}
Also used : Locale(java.util.Locale) JsonArray(com.google.gson.JsonArray) ContactDetail(org.hl7.fhir.r5.model.ContactDetail) ImplementationGuideDependsOnComponent(org.hl7.fhir.r5.model.ImplementationGuide.ImplementationGuideDependsOnComponent) JsonPrimitive(com.google.gson.JsonPrimitive) GsonBuilder(com.google.gson.GsonBuilder) CommaSeparatedStringBuilder(org.hl7.fhir.utilities.CommaSeparatedStringBuilder) JsonObject(com.google.gson.JsonObject) Gson(com.google.gson.Gson) UnsupportedEncodingException(java.io.UnsupportedEncodingException) SimpleDateFormat(java.text.SimpleDateFormat)

Example 33 with ImplementationGuide

use of org.hl7.fhir.dstu3.model.ImplementationGuide in project org.hl7.fhir.core by hapifhir.

the class IgLoaderTests method testFailIfInvalidFHIRVersion.

@Test
public void testFailIfInvalidFHIRVersion() throws IOException {
    IgLoader igLoader = Mockito.spy(new IgLoader(filesystemPackageCacheManager, simpleWorkerContext, "4.0.1"));
    Exception exception = assertThrows(FHIRException.class, () -> {
        List<ImplementationGuide> igs = Collections.emptyList();
        igLoader.loadIg(igs, Collections.emptyMap(), "[0.1.2]" + DUMMY_PATH, false);
    });
    assertLinesMatch(Arrays.asList(".*Unsupported FHIR Version.*"), Arrays.asList(exception.getMessage()));
}
Also used : ImplementationGuide(org.hl7.fhir.r5.model.ImplementationGuide) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) Test(org.junit.jupiter.api.Test) ParameterizedTest(org.junit.jupiter.params.ParameterizedTest)

Example 34 with ImplementationGuide

use of org.hl7.fhir.dstu3.model.ImplementationGuide in project org.hl7.fhir.core by hapifhir.

the class TurtleTests method test_implementationguide_example.

@Test
public void test_implementationguide_example() throws FileNotFoundException, IOException, Exception {
    System.out.println("implementationguide-example.ttl");
    new Turtle().parse(TextFile.fileToString("C:\\work\\org.hl7.fhir\\build\\publish\\implementationguide-example.ttl"));
}
Also used : Turtle(org.hl7.fhir.dstu3.utils.formats.Turtle) Test(org.junit.jupiter.api.Test)

Example 35 with ImplementationGuide

use of org.hl7.fhir.dstu3.model.ImplementationGuide in project org.hl7.fhir.core by hapifhir.

the class DataRenderer method isCanonical.

private boolean isCanonical(String path) {
    if (!path.endsWith(".url"))
        return false;
    String t = path.substring(0, path.length() - 4);
    StructureDefinition sd = getContext().getWorker().fetchTypeDefinition(t);
    if (sd == null)
        return false;
    if (Utilities.existsInList(t, VersionUtilities.getCanonicalResourceNames(getContext().getWorker().getVersion()))) {
        return true;
    }
    if (Utilities.existsInList(t, "ActivityDefinition", "CapabilityStatement", "CapabilityStatement2", "ChargeItemDefinition", "Citation", "CodeSystem", "CompartmentDefinition", "ConceptMap", "ConditionDefinition", "EventDefinition", "Evidence", "EvidenceReport", "EvidenceVariable", "ExampleScenario", "GraphDefinition", "ImplementationGuide", "Library", "Measure", "MessageDefinition", "NamingSystem", "PlanDefinition"))
        return true;
    return sd.getBaseDefinitionElement().hasExtension("http://hl7.org/fhir/StructureDefinition/structuredefinition-codegen-super");
}
Also used : StructureDefinition(org.hl7.fhir.r5.model.StructureDefinition)

Aggregations

ImplementationGuide (org.hl7.fhir.r5.model.ImplementationGuide)16 Complex (org.hl7.fhir.r4.utils.formats.Turtle.Complex)13 StructureDefinition (org.hl7.fhir.r5.model.StructureDefinition)12 FHIRException (org.hl7.fhir.exceptions.FHIRException)11 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)9 File (java.io.File)8 JsonObject (com.google.gson.JsonObject)7 Complex (org.hl7.fhir.dstu2016may.formats.RdfGenerator.Complex)7 Complex (org.hl7.fhir.dstu3.utils.formats.Turtle.Complex)7 XmlParser (org.hl7.fhir.r5.formats.XmlParser)6 SearchParameter (org.hl7.fhir.r5.model.SearchParameter)5 Gson (com.google.gson.Gson)4 GsonBuilder (com.google.gson.GsonBuilder)4 JsonArray (com.google.gson.JsonArray)4 FileInputStream (java.io.FileInputStream)4 FileOutputStream (java.io.FileOutputStream)4 IOException (java.io.IOException)4 ArrayList (java.util.ArrayList)4 CanonicalResource (org.hl7.fhir.r5.model.CanonicalResource)4 ValueSet (org.hl7.fhir.r5.model.ValueSet)4