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Example 96 with ElementDefinition

use of org.hl7.fhir.r4.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method describeCardinality.

private String describeCardinality(ElementDefinition definition, ElementDefinition fallback, UnusedTracker tracker) {
    IntegerType min = definition.hasMinElement() ? definition.getMinElement() : new IntegerType();
    StringType max = definition.hasMaxElement() ? definition.getMaxElement() : new StringType();
    if (min.isEmpty() && fallback != null)
        min = fallback.getMinElement();
    if (max.isEmpty() && fallback != null)
        max = fallback.getMaxElement();
    tracker.used = !max.isEmpty() && !max.getValue().equals("0");
    if (min.isEmpty() && max.isEmpty())
        return null;
    else
        return (!min.hasValue() ? "" : Integer.toString(min.getValue())) + ".." + (!max.hasValue() ? "" : max.getValue());
}
Also used : IntegerType(org.hl7.fhir.dstu3.model.IntegerType) StringType(org.hl7.fhir.dstu3.model.StringType)

Example 97 with ElementDefinition

use of org.hl7.fhir.r4.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateSchematrons.

// generate schematrons for the rules in a structure definition
public void generateSchematrons(OutputStream dest, StructureDefinition structure) throws IOException, DefinitionException {
    if (structure.getDerivation() != TypeDerivationRule.CONSTRAINT)
        throw new DefinitionException("not the right kind of structure to generate schematrons for");
    if (!structure.hasSnapshot())
        throw new DefinitionException("needs a snapshot");
    StructureDefinition base = context.fetchResource(StructureDefinition.class, structure.getBaseDefinition());
    SchematronWriter sch = new SchematronWriter(dest, SchematronType.PROFILE, base.getName());
    ElementDefinition ed = structure.getSnapshot().getElement().get(0);
    generateForChildren(sch, "f:" + ed.getPath(), ed, structure, base);
    sch.dump();
}
Also used : StructureDefinition(org.hl7.fhir.dstu3.model.StructureDefinition) SchematronWriter(org.hl7.fhir.utilities.xml.SchematronWriter) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) ElementDefinition(org.hl7.fhir.dstu3.model.ElementDefinition)

Example 98 with ElementDefinition

use of org.hl7.fhir.r4.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method genGridElement.

private void genGridElement(String defPath, HierarchicalTableGenerator gen, List<Row> rows, ElementDefinition element, List<ElementDefinition> all, List<StructureDefinition> profiles, boolean showMissing, String profileBaseFileName, Boolean extensions, String corePath, String imagePath, boolean root, boolean isConstraintMode) throws IOException {
    StructureDefinition profile = profiles == null ? null : profiles.get(profiles.size() - 1);
    String s = tail(element.getPath());
    List<ElementDefinition> children = getChildren(all, element);
    boolean isExtension = (s.equals("extension") || s.equals("modifierExtension"));
    if (!onlyInformationIsMapping(all, element)) {
        Row row = gen.new Row();
        row.setAnchor(element.getPath());
        row.setColor(getRowColor(element, isConstraintMode));
        boolean hasDef = element != null;
        String ref = defPath == null ? null : defPath + element.getId();
        UnusedTracker used = new UnusedTracker();
        used.used = true;
        Cell left = gen.new Cell();
        if (element.getType().size() == 1 && element.getType().get(0).isPrimitive())
            left.getPieces().add(gen.new Piece(ref, "\u00A0\u00A0" + s, !hasDef ? null : gt(element.getDefinitionElement())).addStyle("font-weight:bold"));
        else
            left.getPieces().add(gen.new Piece(ref, "\u00A0\u00A0" + s, !hasDef ? null : gt(element.getDefinitionElement())));
        if (element.hasSliceName()) {
            left.getPieces().add(gen.new Piece("br"));
            String indent = StringUtils.repeat('\u00A0', 1 + 2 * (element.getPath().split("\\.").length));
            left.getPieces().add(gen.new Piece(null, indent + "(" + element.getSliceName() + ")", null));
        }
        row.getCells().add(left);
        ExtensionContext extDefn = null;
        genCardinality(gen, element, row, hasDef, used, null);
        if (hasDef && !"0".equals(element.getMax()))
            genTypes(gen, row, element, profileBaseFileName, profile, corePath, imagePath);
        else
            row.getCells().add(gen.new Cell());
        generateGridDescription(gen, row, element, null, used.used, null, null, profile, corePath, imagePath, root, null);
        /*      if (element.hasSlicing()) {
        if (standardExtensionSlicing(element)) {
          used.used = element.hasType() && element.getType().get(0).hasProfile();
          showMissing = false;
        } else {
          row.setIcon("icon_slice.png", HierarchicalTableGenerator.TEXT_ICON_SLICE);
          row.getCells().get(2).getPieces().clear();
          for (Cell cell : row.getCells())
            for (Piece p : cell.getPieces()) {
              p.addStyle("font-style: italic");
            }
        }
      }*/
        rows.add(row);
        for (ElementDefinition child : children) if (child.getMustSupport())
            genGridElement(defPath, gen, row.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, isExtension, corePath, imagePath, false, isConstraintMode);
    }
}
Also used : StructureDefinition(org.hl7.fhir.dstu3.model.StructureDefinition) Piece(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Piece) ElementDefinition(org.hl7.fhir.dstu3.model.ElementDefinition) Row(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Row) Cell(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Cell)

Example 99 with ElementDefinition

use of org.hl7.fhir.r4.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateTable.

public XhtmlNode generateTable(String defFile, StructureDefinition profile, boolean diff, String imageFolder, boolean inlineGraphics, String profileBaseFileName, boolean snapshot, String corePath, String imagePath, boolean logicalModel, boolean allInvariants, Set<String> outputTracker) throws IOException, FHIRException {
    // check it's ok to get rid of one of these
    assert (diff != snapshot);
    HierarchicalTableGenerator gen = new HierarchicalTableGenerator(imageFolder, inlineGraphics);
    gen.setTranslator(getTranslator());
    TableModel model = gen.initNormalTable(corePath, false, true, profile.getId() + (diff ? "d" : "s"), false);
    List<ElementDefinition> list = diff ? profile.getDifferential().getElement() : profile.getSnapshot().getElement();
    List<StructureDefinition> profiles = new ArrayList<StructureDefinition>();
    profiles.add(profile);
    genElement(defFile == null ? null : defFile + "#", gen, model.getRows(), list.get(0), list, profiles, diff, profileBaseFileName, null, snapshot, corePath, imagePath, true, logicalModel, profile.getDerivation() == TypeDerivationRule.CONSTRAINT && usesMustSupport(list), allInvariants);
    try {
        return gen.generate(model, imagePath, 0, outputTracker);
    } catch (org.hl7.fhir.exceptions.FHIRException e) {
        throw new FHIRException(e.getMessage(), e);
    }
}
Also used : StructureDefinition(org.hl7.fhir.dstu3.model.StructureDefinition) ArrayList(java.util.ArrayList) HierarchicalTableGenerator(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator) FHIRException(org.hl7.fhir.exceptions.FHIRException) ElementDefinition(org.hl7.fhir.dstu3.model.ElementDefinition) FHIRException(org.hl7.fhir.exceptions.FHIRException) TableModel(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.TableModel)

Example 100 with ElementDefinition

use of org.hl7.fhir.r4.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateGridDescription.

private Cell generateGridDescription(HierarchicalTableGenerator gen, Row row, ElementDefinition definition, ElementDefinition fallback, boolean used, String baseURL, String url, StructureDefinition profile, String corePath, String imagePath, boolean root, ElementDefinition valueDefn) throws IOException {
    Cell c = gen.new Cell();
    row.getCells().add(c);
    if (used) {
        if (definition.hasContentReference()) {
            ElementDefinition ed = getElementByName(profile.getSnapshot().getElement(), definition.getContentReference());
            if (ed == null)
                c.getPieces().add(gen.new Piece(null, "Unknown reference to " + definition.getContentReference(), null));
            else
                c.getPieces().add(gen.new Piece("#" + ed.getPath(), "See " + ed.getPath(), null));
        }
        if (definition.getPath().endsWith("url") && definition.hasFixed()) {
            c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, "\"" + buildJson(definition.getFixed()) + "\"", null).addStyle("color: darkgreen")));
        } else {
            if (url != null) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                String fullUrl = url.startsWith("#") ? baseURL + url : url;
                StructureDefinition ed = context.fetchResource(StructureDefinition.class, url);
                String ref = null;
                if (ed != null) {
                    String p = ed.getUserString("path");
                    if (p != null) {
                        ref = p.startsWith("http:") || igmode ? p : Utilities.pathURL(corePath, p);
                    }
                }
                c.getPieces().add(gen.new Piece(null, "URL: ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(ref, fullUrl, null));
            }
            if (definition.hasSlicing()) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                c.getPieces().add(gen.new Piece(null, "Slice: ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(null, describeSlice(definition.getSlicing()), null));
            }
            if (definition != null) {
                ElementDefinitionBindingComponent binding = null;
                if (valueDefn != null && valueDefn.hasBinding() && !valueDefn.getBinding().isEmpty())
                    binding = valueDefn.getBinding();
                else if (definition.hasBinding())
                    binding = definition.getBinding();
                if (binding != null && !binding.isEmpty()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    BindingResolution br = pkp.resolveBinding(profile, binding, definition.getPath());
                    c.getPieces().add(checkForNoChange(binding, gen.new Piece(null, "Binding: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(binding, gen.new Piece(br.url == null ? null : Utilities.isAbsoluteUrl(br.url) || !pkp.prependLinks() ? br.url : corePath + br.url, br.display, null)));
                    if (binding.hasStrength()) {
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(null, " (", null)));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(corePath + "terminologies.html#" + binding.getStrength().toCode(), binding.getStrength().toCode(), binding.getStrength().getDefinition())));
                        c.getPieces().add(gen.new Piece(null, ")", null));
                    }
                }
                for (ElementDefinitionConstraintComponent inv : definition.getConstraint()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(inv, gen.new Piece(null, inv.getKey() + ": ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(inv, gen.new Piece(null, inv.getHuman(), null)));
                }
                if (definition.hasFixed()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, "Fixed Value: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, buildJson(definition.getFixed()), null).addStyle("color: darkgreen")));
                } else if (definition.hasPattern()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, "Required Pattern: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, buildJson(definition.getPattern()), null).addStyle("color: darkgreen")));
                } else if (definition.hasExample()) {
                    for (ElementDefinitionExampleComponent ex : definition.getExample()) {
                        if (!c.getPieces().isEmpty())
                            c.addPiece(gen.new Piece("br"));
                        c.getPieces().add(checkForNoChange(ex, gen.new Piece(null, "Example'" + ("".equals("General") ? "" : " " + ex.getLabel() + "'") + ": ", null).addStyle("font-weight:bold")));
                        c.getPieces().add(checkForNoChange(ex, gen.new Piece(null, buildJson(ex.getValue()), null).addStyle("color: darkgreen")));
                    }
                }
                if (definition.hasMaxLength() && definition.getMaxLength() != 0) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(definition.getMaxLengthElement(), gen.new Piece(null, "Max Length: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(definition.getMaxLengthElement(), gen.new Piece(null, Integer.toString(definition.getMaxLength()), null).addStyle("color: darkgreen")));
                }
                if (profile != null) {
                    for (StructureDefinitionMappingComponent md : profile.getMapping()) {
                        if (md.hasExtension(ToolingExtensions.EXT_TABLE_NAME)) {
                            ElementDefinitionMappingComponent map = null;
                            for (ElementDefinitionMappingComponent m : definition.getMapping()) if (m.getIdentity().equals(md.getIdentity()))
                                map = m;
                            if (map != null) {
                                for (int i = 0; i < definition.getMapping().size(); i++) {
                                    c.addPiece(gen.new Piece("br"));
                                    c.getPieces().add(gen.new Piece(null, ToolingExtensions.readStringExtension(md, ToolingExtensions.EXT_TABLE_NAME) + ": " + map.getMap(), null));
                                }
                            }
                        }
                    }
                }
                if (definition.getComment() != null) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(gen.new Piece(null, "Comments: ", null).addStyle("font-weight:bold"));
                    c.addPiece(gen.new Piece("br"));
                    c.addMarkdown(definition.getComment());
                // c.getPieces().add(checkForNoChange(definition.getCommentElement(), gen.new Piece(null, definition.getComment(), null)));
                }
            }
        }
    }
    return c;
}
Also used : ElementDefinitionExampleComponent(org.hl7.fhir.dstu3.model.ElementDefinition.ElementDefinitionExampleComponent) StructureDefinition(org.hl7.fhir.dstu3.model.StructureDefinition) BindingResolution(org.hl7.fhir.dstu3.conformance.ProfileUtilities.ProfileKnowledgeProvider.BindingResolution) StructureDefinitionMappingComponent(org.hl7.fhir.dstu3.model.StructureDefinition.StructureDefinitionMappingComponent) Piece(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Piece) ElementDefinition(org.hl7.fhir.dstu3.model.ElementDefinition) Cell(org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Cell) ElementDefinitionBindingComponent(org.hl7.fhir.dstu3.model.ElementDefinition.ElementDefinitionBindingComponent) ElementDefinitionConstraintComponent(org.hl7.fhir.dstu3.model.ElementDefinition.ElementDefinitionConstraintComponent) ElementDefinitionMappingComponent(org.hl7.fhir.dstu3.model.ElementDefinition.ElementDefinitionMappingComponent)

Aggregations

ArrayList (java.util.ArrayList)226 ElementDefinition (org.hl7.fhir.r5.model.ElementDefinition)199 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)120 FHIRException (org.hl7.fhir.exceptions.FHIRException)116 StructureDefinition (org.hl7.fhir.r5.model.StructureDefinition)92 ElementDefinition (org.hl7.fhir.r4b.model.ElementDefinition)91 ValidationMessage (org.hl7.fhir.utilities.validation.ValidationMessage)85 ElementDefinition (org.hl7.fhir.dstu3.model.ElementDefinition)82 ElementDefinition (org.hl7.fhir.r4.model.ElementDefinition)68 TypeRefComponent (org.hl7.fhir.r5.model.ElementDefinition.TypeRefComponent)60 CommaSeparatedStringBuilder (org.hl7.fhir.utilities.CommaSeparatedStringBuilder)57 Cell (org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Cell)51 StructureDefinition (org.hl7.fhir.r4b.model.StructureDefinition)50 StructureDefinition (org.hl7.fhir.dstu3.model.StructureDefinition)46 Piece (org.hl7.fhir.utilities.xhtml.HierarchicalTableGenerator.Piece)44 ElementDefinition (org.hl7.fhir.dstu2016may.model.ElementDefinition)42 ElementDefinition (org.hl7.fhir.dstu2.model.ElementDefinition)41 FHIRFormatError (org.hl7.fhir.exceptions.FHIRFormatError)41 XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)38 List (java.util.List)37