Examples with Organization org.hl7.fhir.r4.model.Organization used on opensource projects

Example 76 with Organization

use of org.hl7.fhir.r4.model.Organization in project geoprism-registry by terraframe.

the class MCSDFhirDataPopulator method populate.

@Override
public void populate(Business row, Facility facility) {
    super.populate(row, facility);
    ServerGeoObjectType type = this.getList().getGeoObjectType();
    String label = type.getLabel().getValue();
    String system = this.getContext().getSystem();
    CodeableConcept concept = new CodeableConcept().setText(label).addCoding(new Coding(system, type.getCode(), label));
    Location location = facility.getLocation();
    location.addType(concept);
    location.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.Location");
    Organization organization = facility.getOrganization();
    organization.addType(concept);
    organization.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.Organization");
    if (type.getGeometryType().equals(GeometryType.MULTIPOINT)) {
        location.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.FacilityLocation");
        location.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:facility", "Facility")));
        location.setPhysicalType(new CodeableConcept().setText("Building").addCoding(new Coding("http://terminology.hl7.org/CodeSystem/location-physical-type", "bu", "Building")));
        organization.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.FacilityOrganization");
        organization.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:facility", "Facility")));
    } else {
        location.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.JurisdictionLocation");
        location.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:jurisdiction", "Jurisdiction")));
        location.setPhysicalType(new CodeableConcept().setText("Jurisdiction").addCoding(new Coding("http://terminology.hl7.org/CodeSystem/location-physical-type", "jdn", "Jurisdiction")));
        organization.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.JurisdictionsOrganization");
        organization.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:jurisdiction", "Jurisdiction")));
    }
    if (this.hierarchies.size() > 1) {
        for (ServerHierarchyType hierarchy : this.hierarchies) {
            this.addHierarchyExtension(row, facility, hierarchy);
        }
    } else if (this.hierarchies.size() == 1) {
        this.setPartOf(row, facility, this.hierarchies.get(0));
    }
}

Example 77 with Organization

use of org.hl7.fhir.r4.model.Organization in project geoprism-registry by terraframe.

the class TolkienFhirDataPopulator method populate.

@Override
public void populate(Business row, Facility facility) {
    super.populate(row, facility);
    ServerGeoObjectType type = this.getList().getGeoObjectType();
    String label = type.getLabel().getValue();
    String system = this.getContext().getSystem();
    CodeableConcept concept = new CodeableConcept().setText(label).addCoding(new Coding(system, type.getCode(), label));
    Location location = facility.getLocation();
    location.addType(concept);
    location.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.Location");
    Organization organization = facility.getOrganization();
    organization.addType(concept);
    organization.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.Organization");
    if (type.getGeometryType().equals(GeometryType.MULTIPOINT)) {
        location.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.FacilityLocation");
        location.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:facility", "Facility")));
        location.setPhysicalType(new CodeableConcept().setText("Building").addCoding(new Coding("http://terminology.hl7.org/CodeSystem/location-physical-type", "bu", "Building")));
        organization.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.FacilityOrganization");
        organization.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:facility", "Facility")));
    } else {
        location.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.JurisdictionLocation");
        location.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:jurisdiction", "Jurisdiction")));
        location.setPhysicalType(new CodeableConcept().setText("Jurisdiction").addCoding(new Coding("http://terminology.hl7.org/CodeSystem/location-physical-type", "jdn", "Jurisdiction")));
        organization.getMeta().addProfile("http://ihe.net/fhir/StructureDefinition/IHE.mCSD.JurisdictionsOrganization");
        organization.addType(new CodeableConcept().addCoding(new Coding("urn:ietf:rfc:3986", "urn:ihe:iti:mcsd:2019:jurisdiction", "Jurisdiction")));
    }
    // if (this.hierarchies.size() > 1)
    {
        for (ServerHierarchyType hierarchy : this.hierarchies) {
            this.addHierarchyExtension(row, facility, hierarchy);
        }
    }
// else if (this.hierarchies.size() == 1)
// {
// this.setPartOf(row, facility, this.hierarchies.get(0));
// }
}

Example 78 with Organization

use of org.hl7.fhir.r4.model.Organization in project pathling by aehrc.

the class BatchTest method batch.

@Test
void batch() throws URISyntaxException {
    // Check the counts for each resource type.
    for (final ResourceType resourceType : RESOURCE_TYPES) {
        assertResourceCount(resourceType, expectedCounts.get(resourceType));
    }
    // Send a batch request with a new Patient, Practitioner and Organization resource.
    final String request = getResourceAsString("requests/BatchTest/batch.Bundle.json");
    final Bundle requestBundle = (Bundle) jsonParser.parseResource(request);
    final String url = "http://localhost:" + port + "/fhir";
    final ResponseEntity<String> response = restTemplate.exchange(url, HttpMethod.POST, RequestEntity.put(new URI(url)).contentType(TestHelpers.FHIR_MEDIA_TYPE).accept(TestHelpers.FHIR_MEDIA_TYPE).body(request), String.class);
    assertEquals(200, response.getStatusCode().value());
    assertNotNull(response.getBody());
    // Check the response bundle is successful and matches the requests.
    final Bundle responseBundle = (Bundle) jsonParser.parseResource(response.getBody());
    assertEquals(requestBundle.getEntry().size(), responseBundle.getEntry().size());
    for (final BundleEntryComponent entry : responseBundle.getEntry()) {
        assertTrue(entry.getResponse().getStatus().startsWith("200"));
        assertNotNull(entry.getResource());
        final String resourceId = entry.getResource().getIdElement().getIdPart();
        final ResourceType resourceType = ResourceType.fromCode(entry.getResource().getResourceType().toString());
        getResourceResult(resourceType, resourceId);
    }
    // Check that the new resource counts are one greater than before the operation.
    for (final ResourceType resourceType : RESOURCE_TYPES) {
        assertResourceCount(resourceType, expectedCounts.get(resourceType) + 1);
    }
}

Example 79 with Organization

use of org.hl7.fhir.r4.model.Organization in project eCRNow by drajer-health.

the class FhirEicrGeneratorFromR4 method convertR4FhirBundletoCdaEicr.

public static String convertR4FhirBundletoCdaEicr(R4FhirData data) {
    StringBuilder eICR = new StringBuilder();
    if (data != null) {
        Bundle bundle = data.getData();
        if (bundle != null) {
            List<BundleEntryComponent> entries = bundle.getEntry();
            for (BundleEntryComponent ent : entries) {
                // Populate data ..this can be moved to the APIs where the bundle is getting created.
                if (ent.getResource() instanceof Patient) {
                    logger.info(" Bundle contains Patient ");
                    data.setPatient((Patient) ent.getResource());
                } else if (ent.getResource() instanceof Practitioner) {
                    logger.info(" Bundle contains Practitioner ");
                    data.setPractitioner((Practitioner) ent.getResource());
                } else if (ent.getResource() instanceof Encounter) {
                    logger.info(" Bundle contains Encounter ");
                    data.setEncounter((Encounter) ent.getResource());
                } else if (ent.getResource() instanceof Location) {
                    logger.info(" Bundle contains Location ");
                    data.setLocation((Location) ent.getResource());
                } else if (ent.getResource() instanceof Organization) {
                    logger.info(" Bundle contains Organization ");
                    data.setOrganization((Organization) ent.getResource());
                } else if (ent.getResource() instanceof Condition) {
                    logger.info(" Bundle contains Condition ");
                    data.getConditions().add((Condition) ent.getResource());
                } else if (ent.getResource() instanceof Observation) {
                    logger.info(" Bundle constains Observation ");
                    Observation obs = (Observation) ent.getResource();
                } else if (ent.getResource() instanceof DiagnosticReport) {
                    logger.info(" Bundle contains Diagnostic Report ");
                    data.getDiagReports().add((DiagnosticReport) ent.getResource());
                } else if (ent.getResource() instanceof MedicationStatement) {
                    logger.info(" Bundle contains MedicationStatement ");
                    data.getMedications().add((MedicationStatement) ent.getResource());
                } else if (ent.getResource() instanceof Immunization) {
                    logger.info(" Bundle contains Immunization ");
                    data.getImmunizations().add((Immunization) ent.getResource());
                }
            }
        }
    } else {
        logger.error(" No Fhir Bundle Available to create CDA Documents ");
    }
    return eICR.toString();
}

Example 80 with Organization

use of org.hl7.fhir.r4.model.Organization in project eCRNow by drajer-health.

the class CdaFhirUtilitiesTest method testGetOrganization_withOrgEntry.

@Test
public void testGetOrganization_withOrgEntry() {
    Reference ref = new Reference();
    ref.setReference("ResId");
    BundleEntryComponent bundleEntry = new BundleEntryComponent();
    Resource org = ResourceFactory.createResource("Organization");
    org.setId("ResId");
    bundleEntry.setResource(org);
    List<BundleEntryComponent> entries = new ArrayList<BundleEntryComponent>();
    entries.add(bundleEntry);
    Encounter en = new Encounter();
    en.setServiceProvider(ref);
    Organization testOrg = CdaFhirUtilities.getOrganization(entries, en);
    assertNotNull(testOrg);
}