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Example 81 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireBuilder method processDataType.

private void processDataType(StructureDefinition profile, QuestionnaireItemComponent group, ElementDefinition element, String path, TypeRefComponent t, List<QuestionnaireResponse.QuestionnaireResponseItemComponent> answerGroups, List<ElementDefinition> parents) throws FHIRException {
    String tc = t.getWorkingCode();
    if (tc.equals("code"))
        addCodeQuestions(group, element, path, answerGroups);
    else if (Utilities.existsInList(tc, "string", "id", "oid", "uuid", "markdown"))
        addStringQuestions(group, element, path, answerGroups);
    else if (Utilities.existsInList(tc, "uri", "url", "canonical"))
        addUriQuestions(group, element, path, answerGroups);
    else if (tc.equals("boolean"))
        addBooleanQuestions(group, element, path, answerGroups);
    else if (tc.equals("decimal"))
        addDecimalQuestions(group, element, path, answerGroups);
    else if (tc.equals("dateTime") || tc.equals("date"))
        addDateTimeQuestions(group, element, path, answerGroups);
    else if (tc.equals("instant"))
        addInstantQuestions(group, element, path, answerGroups);
    else if (tc.equals("time"))
        addTimeQuestions(group, element, path, answerGroups);
    else if (tc.equals("CodeableConcept"))
        addCodeableConceptQuestions(group, element, path, answerGroups);
    else if (tc.equals("Period"))
        addPeriodQuestions(group, element, path, answerGroups);
    else if (tc.equals("Ratio"))
        addRatioQuestions(group, element, path, answerGroups);
    else if (tc.equals("HumanName"))
        addHumanNameQuestions(group, element, path, answerGroups);
    else if (tc.equals("Address"))
        addAddressQuestions(group, element, path, answerGroups);
    else if (tc.equals("ContactPoint"))
        addContactPointQuestions(group, element, path, answerGroups);
    else if (tc.equals("Identifier"))
        addIdentifierQuestions(group, element, path, answerGroups);
    else if (tc.equals("integer") || tc.equals("positiveInt") || tc.equals("unsignedInt"))
        addIntegerQuestions(group, element, path, answerGroups);
    else if (tc.equals("Coding"))
        addCodingQuestions(group, element, path, answerGroups);
    else if (Utilities.existsInList(tc, "Quantity", "Count", "Age", "Duration", "Distance", "Money"))
        addQuantityQuestions(group, element, path, answerGroups);
    else if (tc.equals("Money"))
        addMoneyQuestions(group, element, path, answerGroups);
    else if (tc.equals("Reference"))
        addReferenceQuestions(group, element, path, t.getTargetProfile(), answerGroups);
    else if (tc.equals("Duration"))
        addDurationQuestions(group, element, path, answerGroups);
    else if (tc.equals("base64Binary"))
        addBinaryQuestions(group, element, path, answerGroups);
    else if (tc.equals("Attachment"))
        addAttachmentQuestions(group, element, path, answerGroups);
    else if (tc.equals("Age"))
        addAgeQuestions(group, element, path, answerGroups);
    else if (tc.equals("Range"))
        addRangeQuestions(group, element, path, answerGroups);
    else if (tc.equals("Timing"))
        addTimingQuestions(group, element, path, answerGroups);
    else if (tc.equals("Annotation"))
        addAnnotationQuestions(group, element, path, answerGroups);
    else if (tc.equals("SampledData"))
        addSampledDataQuestions(group, element, path, answerGroups);
    else if (tc.equals("Extension")) {
        if (t.hasProfile())
            addExtensionQuestions(profile, group, element, path, t.getProfile().get(0).getValue(), answerGroups, parents);
    } else if (tc.equals("SampledData"))
        addSampledDataQuestions(group, element, path, answerGroups);
    else if (!tc.equals("Narrative") && !tc.equals("Resource") && !tc.equals("Meta") && !tc.equals("Signature")) {
        StructureDefinition sd = context.fetchTypeDefinition(tc);
        if (sd == null)
            throw new NotImplementedException("Unhandled Data Type: " + tc + " on element " + element.getPath());
        buildGroup(group, sd, sd.getSnapshot().getElementFirstRep(), parents, answerGroups);
    }
}
Also used : StructureDefinition(org.hl7.fhir.r4.model.StructureDefinition) NotImplementedException(org.apache.commons.lang3.NotImplementedException)

Example 82 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method inject.

private void inject(DomainResource r, XhtmlNode x, NarrativeStatus status) {
    if (!x.hasAttribute("xmlns"))
        x.setAttribute("xmlns", "http://www.w3.org/1999/xhtml");
    if (!r.hasText() || !r.getText().hasDiv() || r.getText().getDiv().getChildNodes().isEmpty()) {
        r.setText(new Narrative());
        r.getText().setDiv(x);
        r.getText().setStatus(status);
    } else {
        XhtmlNode n = r.getText().getDiv();
        n.hr();
        n.getChildNodes().addAll(x.getChildNodes());
    }
}
Also used : XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Example 83 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generate.

public String generate(ResourceContext rcontext, org.hl7.fhir.r4.elementmodel.Element er, boolean showCodeDetails, ITypeParser parser) throws IOException, FHIRException {
    if (rcontext == null)
        rcontext = new ResourceContext(null, er);
    this.parser = parser;
    XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
    x.para().b().tx("Generated Narrative" + (showCodeDetails ? " with Details" : ""));
    try {
        ResourceWrapperMetaElement resw = new ResourceWrapperMetaElement(er);
        BaseWrapperMetaElement base = new BaseWrapperMetaElement(er, null, er.getProperty().getStructure(), er.getProperty().getDefinition());
        base.children();
        generateByProfile(resw, er.getProperty().getStructure(), base, er.getProperty().getStructure().getSnapshot().getElement(), er.getProperty().getDefinition(), base.children, x, er.fhirType(), showCodeDetails, 0, rcontext);
    } catch (Exception e) {
        e.printStackTrace();
        x.para().b().setAttribute("style", "color: maroon").tx("Exception generating Narrative: " + e.getMessage());
    }
    inject(er, x, NarrativeStatus.GENERATED);
    return new XhtmlComposer(XhtmlComposer.XML, pretty).compose(x);
}
Also used : XhtmlComposer(org.hl7.fhir.utilities.xhtml.XhtmlComposer) ParseException(java.text.ParseException) TerminologyServiceException(org.hl7.fhir.exceptions.TerminologyServiceException) UnsupportedEncodingException(java.io.UnsupportedEncodingException) NotImplementedException(org.apache.commons.lang3.NotImplementedException) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Example 84 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generate.

/**
 * This generate is optimised for the FHIR build process itself in as much as it
 * generates hyperlinks in the narrative that are only going to be correct for
 * the purposes of the build. This is to be reviewed in the future.
 *
 * @param vs
 * @param codeSystems
 * @throws IOException
 * @throws DefinitionException
 * @throws FHIRFormatError
 * @throws Exception
 */
public boolean generate(ResourceContext rcontext, CodeSystem cs, boolean header, String lang) throws FHIRFormatError, DefinitionException, IOException {
    XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
    boolean hasExtensions = false;
    hasExtensions = generateDefinition(x, cs, header, lang);
    inject(cs, x, hasExtensions ? NarrativeStatus.EXTENSIONS : NarrativeStatus.GENERATED);
    return true;
}
Also used : XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Example 85 with Narrative

use of org.hl7.fhir.r4b.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generateByLiquid.

private boolean generateByLiquid(ResourceContext rcontext, DomainResource r, String liquidTemplate, Set<String> outputTracker) {
    LiquidEngine engine = new LiquidEngine(context, services);
    XhtmlNode x;
    try {
        LiquidDocument doc = engine.parse(liquidTemplate, "template");
        String html = engine.evaluate(doc, r, rcontext);
        x = new XhtmlParser().parseFragment(html);
        if (!x.getName().equals("div"))
            throw new FHIRException("Error in template: Root element is not 'div'");
    } catch (FHIRException | IOException e) {
        x = new XhtmlNode(NodeType.Element, "div");
        x.para().b().setAttribute("style", "color: maroon").tx("Exception generating Narrative: " + e.getMessage());
    }
    inject(r, x, NarrativeStatus.GENERATED);
    return true;
}
Also used : LiquidDocument(org.hl7.fhir.r4.utils.LiquidEngine.LiquidDocument) XhtmlParser(org.hl7.fhir.utilities.xhtml.XhtmlParser) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Aggregations

XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)80 FHIRException (org.hl7.fhir.exceptions.FHIRException)40 IOException (java.io.IOException)34 NotImplementedException (org.apache.commons.lang3.NotImplementedException)30 UnsupportedEncodingException (java.io.UnsupportedEncodingException)27 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)23 Test (org.junit.Test)22 MethodOutcome (ca.uhn.fhir.rest.api.MethodOutcome)19 ArrayList (java.util.ArrayList)19 XhtmlParser (org.hl7.fhir.utilities.xhtml.XhtmlParser)17 Narrative (org.hl7.fhir.r4.model.Narrative)15 Narrative (org.hl7.fhir.r5.model.Narrative)15 StructureDefinition (org.hl7.fhir.r5.model.StructureDefinition)14 XhtmlComposer (org.hl7.fhir.utilities.xhtml.XhtmlComposer)14 GET (javax.ws.rs.GET)12 Path (javax.ws.rs.Path)12 Produces (javax.ws.rs.Produces)12 IBaseOperationOutcome (org.hl7.fhir.instance.model.api.IBaseOperationOutcome)12 FileNotFoundException (java.io.FileNotFoundException)10 LinkedHashMap (java.util.LinkedHashMap)10